Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                -----                                                                                          --------->LBD16                                                                                        ------>ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                       <------ZmHOX2a(2)             --------->AHL20(2)                                                       <---------ARR14(2) --------->HSFB2a(2)                                                                  --------->ARR14(2) <---------HSFB2a(2) --------->ARR14(1)                   ------->TEIL                --------->AGP1 ---->ID1  --------->TOE2(3)                   <----------DOF2            ---------->DOF2----------->GT1   tttttagaaactacataaatttgatacgctggagttgctcttagaccatctttatgggtgaatctaagtccagatttaaagcccaatagatccgaaaaat  6789700                                                                     <---------ANAC55(2)                                                                     <---------ANAC55(1)                               <-----------------AGL2           --------->LBD16                               ----------------->AGL3       <---------ARR14(2)                               ----------------->AGL2       --------->ARR14(2)                               <-----------------AGL3  <----------DOF2              <---------WOX13(1)                         ------>ZmHOX2a(2)            <---------DAG2 <---------ANAC58        --------->YAB1  <------ZmHOX2a(2)          <---------ALFIN1  <---------ANAC58       <---------YAB1  ------->TEIL --------------------->WRI1------>ZmHOX2a(2)   --------->ATHB12 ------AHL20(2)        --------->ARR14(2)         <---------ZAT18    --------->ANAC55(2)     -------- ---->AHL20(2)         <---------ARR14(2)     <-----------GT1<------ZmHOX2a(2)   <---------YAB1   aaatcgaaaatgatagtaaacaatggatccgagtccatttttggatttttagcccacctttggatccgagtacgtgtcaatttttcattgatcaaacgtt  6789800                                                                                                   <-                                        <---------------AGL15                               ------>MYB83                                        --------------->AGL15                               ------>MYB46(1)                                        =============================================================                                        ------>ZmHOX2a(1)                                 <----------                                       <-----------------AGL3                             <---------MYB59                                       ----------------->AGL3        <---------YAB1       -----------                                       <-----------------AGL2  ======================================                                       ==============================================================                                       ==============================================================                                ------>ZmHOX2a(1)              <---------------AGL15     ============           --------->YAB1  <-----------GT1             ------>ZmHOX2a(1)                 ------------       --------->ANAC46<---------DAG2  ========================================MADS_MADS ------------ ->HSFB2a(1)           <----------DOF2 <-----------------AG    ------>ZmHOX2a(1)       <-----------GT1   ctgtattacacaaaaataatccctactttttatcctatattcctatttttggttatcctatattcctatttttgataaacaatctcattttaccaaatat  6789900                                                   <---------YAB1                                              --------->YAB1                                             --------->AHL20(2)                                             <---------ATHB51                                      --------->YAB1                                   --------->YAB1--------->YAB1                                  <---------YAB1--------->ICU4                                --------->YAB1<---------ICU4 --------->MYB52(2)             --------------->AGL15 --------MYB52(1)               --------->TOE2(3)-------->HAHB4 ===============================================MADS_MADS -----AGL15                     <---------------AGL15 ---->AGL15                     --------->TOE1(3)<---------ICU4 =====MADS_MADS         --------->CCA1(2)    <---------AHL20(2)          <---------AHL20(2) =====MADS_MADS        <---------ARR14(2)    --------->ICU4   ----------->GT1 ======MADS_MADS       --------->ARR14(2)--------->AHL20(2)   ------------------------>ANAC81 ===============================================MADS_MADS    --------->DAG2                         - ----->AG  --------->TOE2(3)   ----------------->AGL3       ---------->DOF2 ---------->DOF2         - ----->AGL3--------->TOE1(3)   ----------------->AGL2 ---------->DOF2    --------->AHL20(2)    ------   tgttagtttaaaactttaaactacagatatgaaaccataataagaaaataattatgaaaagaaaaagtaaacaaattaaaaagaaaacttccaacttaac  6790000                                        --------->ANAC58                                        --------->ANAC46                                        ----------->GT1                                        --------->ANAC55(1)                                        --------->ANAC55(2)                              <---------ANAC58                                        --------->ANAC58                               <---------YAB1                                        <---------ANAC55(2)                       --------->AHL20(2)                               ------------------------>ANAC81                    <---------AHL20(2)                          <---------HSFB2a(2)                                    --------->AHL20(2)                          --------->HSFB2a(2)                                    <---------ATHB12 --- -------->YAB1---------->DOF2 --------->DAG2              *TSS                 --------->WOX13(1)<--- -------->AHL20(2)       ----------------->AGL1      ----------->GT1          --------->AHL20(2)<---- ------>CBF--------->AHL20(2)---------->DOF2  --------->YAB1               --------->YAB1<---------ANAC58   aattaaaaccaaaataaaaagaaaacttccaaaaaggaaaacaagtaataacaagaagaaaaaaacatagtttcccataatcaattaatatgcttgtttt  6790100                                                                                               <-----                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)         ---------                                                                  ========================HOX2a_HOX2a                                                                 --------->ARR11(3)         <--------                                                                 <---------ARR11(3)         ---------                                                        <-------GAMYB                    --------->ANAC58                                                       <---------ANAC58             <----------ID1        <---------ANAC58                               <---------ANAC58            ==================HOX2a_HOX2a        <---------ANAC58                               <---------ANAC46------->GAMYB<----------ARF1 ------>ANAC55(2)                                      <---------bZIP60(2)  <---------ANAC46<-------- ------TOE2(3)                   ---------->DOF2      <-----------------------TaNAC69(2) --------->ANAC58 -------GT1         <-----------GT1            ---------->DOF2  --------->GLK1(1)  <------ZmHOX2a(1)<   acgttttcttccttgacaaaattcacaattccattgaaagagagaagagaaaagatggcgttgcagagatcaacagcgtcgtttaggagacaaggatcgt  6790200                     <-------TEIL        --------->HSFB2a(2)                                                       --------->ANAC55(2)        <---------HSFB2a(2)                                                       <---------ANAC55(2)      ----------->RAV1(2)                                                         <---------ANAC46      <---------At4g35610  <---------At4g35610                                  --------->MYB52(1)      --------->At4g35610  --------->At4g35610                                 ----------->TGA1 ------HVH21        --------->ARR14(2)          ---------->DOF2                ----------->HVH21 ======HOX2a_HOX2a  <---------ARR14(2)     --------->MYB46(3)                <---------ICU4 >ARR11(3)      <-----------RAV1(2)        --------->DEAR3(1)             --------->YAB1 -ARR11(3)   --------->ANAC58         --------->ANAC58                   <------ZmHOX2a(2)     <----- >ARR14(2)   ----------->HVH21        --------->ANAC46                 ------->GAMYB           <----- -ARR14(2)   --------->ANAC58----------->GT1------->GAMYB              --------->YAB1 <------ZmHOX2a(2) ------ZmHOX2a(1)  <---------GLK1(2)  --------->ANAC58                --------->MYB46(3)       ------   caggactcatctggaacgacaggttcttgagcggagaaattcgcaacgacgaaagacaagaagaccggtgcaacgatcatcgtgacggatcaatggctgc  6790300                                     --------->ALFIN1                                       ---------                                     <---------bZIP60(2)                               <-----------HVH21                                    <---------ARR14(2)                                --------->AtMYB61                                   <------ZmHOX2a(1)                               <---------ALFIN1<-                           ----------->HVH21                   <---------At4g35610------>ZmHOX2a(2)--      ================================RAV                      --------->At4g35610--------->MYB46(3)      ----------->RAV1(1) <-----------RAV1(2)           --------->ALFIN1         <------ZmHOX2a(2) <- ----At4g35610           <---------At4g35610          <---------ARR14(2)        --------->ARR14(2) -- ----ZAT2----------->GT1 --------->At4g35610          --------->ARR14(2)        <---------ARR14(2)--- --->At4g35610          <-----------HVH21            --------->ATHB12         <---------MYB46(3)  ---   tacgactgcaacagtgaaacgtagcgcatcagacggaggatgtggccatggtggaagattgggggagctatctccagcgttggatccaccttcacctaaa  6790400              <---------RAP2.6(2)            <---------MYB46(3)          <-------GAMYB          <---------ANAC58          <---------ANAC58          <---------ANAC46         <------MYB83         <---------MYB46(3)         <------MYB46(1)         --------->MYB55(2)                                                                        --        <---------AtMYB61                                                                          <-       <---------MYB52(1)                                                               <---------ANAC55(2)      <-------GAMYB                                                      ---------->DOF2--------->ANAC55(2)     <---------ANAC46                                                   <------ZmHOX2a(2)          <-     <---------MYB46(3)                                                <---------ARR11(3)          -- >TOE2(3)--------->MYB52(2)                                            --------->ARR11(3)     <------ --------ARR14(2)                                                <------ZmHOX2a(1) <---------------AtSPL3 ------->ARR14(2)         <----------DOF2                        ==============HOX2a_HOX2a<---------AHL20(2) --------ARR11(3) <----------DOF2                               --------->At4g35610--------------->AtSPL8 ------->ARR11(3)<---------ANAC46             ---------->DOF2 <-----------RAV1(2)  <---------------AtSPL8 ------>RVE1(1)  <---------ANAC58          <----------ID1 --------->At4g35610      --------------->AtSPL3 ------>CCA1(1)  <---------ANAC58 <---------ANAC46     --------->At4g35610      --------->ALFIN1  <--   atatctgccgttggttgtggcttttgttctttgttttcgtctaatgggaaaagaagaagcagaggcaggagaagatcaagcggtggaagtacttaattta  6790500                   --------->YAB1            <---------AHL20(2)           --------->ICU4           <---------YAB1         >>>>>>>>>GT-2       --------->At5g28300               <------ZmHOX2a(2)      ----------->GT1                    =================HOX2a_HOX2a ------->TOE2(3)  ------->TEIL          --------->ARR11(3) --------------AGL15                    <---------ARR11(3) ---------DOF2<---------TOE2(3)     <---------YAB1  <---------ARR14(2)             <---------ICU4 ------------->AGL15              --------->YAB1    --------->ARR14(2)            --------->ICU4   <- ---AHL20(2)--------->AHL20(2)   --------->ICU4    <------ZmHOX2a(1)         ----------->GT1--------- ---------------AGL3      <---------AHL20(2)     <---------TOE2(3)       <----------DOF2    <--------   tctttaaacggtaattaatgaacataatttaaacgattatgagatcatatttaggatttgattatgttcttctctctttatgtaaaaatttcgaaatctt  6790600  Previous    Next  AGI:  At5g20100.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80180.1); similar to hypothetical protein MtrDRAFT_AC148340g12v2 [Medicago truncatula] (GB:ABD28396.1) Range:  from: 6790058    to: 6790727    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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