Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                           <------MYB83                                --------->ANAC58                                           <------MYB46(1)                                --------->ANAC58                                           <---------ANAC46                              <---------ALFIN1                                             <---------ANAC58                        <---------CCA1(2)                                                  <---------ANAC58                --------->ARR14(2)                                                        --------->MYB46(2)                --------->ARR11(3)             <---------ANAC58                           <---------MYB46(3)                <---------ARR11(3)             <---------ANAC58                       <---------YAB1<                <---------ARR14(2)       <---------YAB1                  --------->YAB1--------->ATHB12               <---------CCA1(2)--------->ANAC46                        <---------ATHB12  <---------AtMYB61 --YAB1      --------->YAB1  <---------REM1(2) <---------ANAC46       --------->WOX13(1)  --------->MYB111(1)   ccatttgctctagtatcatatctcccatctctccacgctagttatttttgtgtgttcatattggttttgtttcaatcaaaaactgagtatgtttggtgtg  6775800                    <---------ANAC55(2)                    <---------ANAC46     --------->WOX13(1)   <---------YAB1   <---------ANAC55(1)                                                        <----- --->ALFIN1         ----------->GT1                                       <---------WOX13(1)   ------ --ANAC58   --------->TOE2(3)                                          <---------YAB1  --------->MYB46(3) --ANAC46 ------->TEIL   --------->YAB1                       <---------ARR11(3)       <---------HSFC1(2) --ANAC58 -------->P--------->ANAC55(2)                     <---------MYB52(1)         --------->HSFC1(2) ---------YAB1     <-------TEIL--------->ANAC46--------->YAB1 --------->ARR11(3)       <---------HSFB2a(1)   ttactattaatcaacctttgatacgtataataaacacaatttataccaaaaatgatatatccattatctcgacatgaatgactagaagaaccatcgtctc  6775900                                     --------->WOX13(1)                                   <------ZmHOX2a(2)                                  --------->ARR11(3)                                                <                                  <---------ARR11(3)                                --------->YAB1<--                              ---------->DOF2                                       --------->TOE1(3)                           --------->AHL20(2)                                       --------->TOE2(3)                           --------->YAB1                                         ------->TEIL------- ----------->HVH21      --------->WOX13(1)                                     <---------ATHB12   <-- ----HSFB2a(2)        <---------ATHB12              --------->ATHB12   ---------->DOF2        <------ --->HSFB2a(2)------->TEIL<---------ATHB51     <---------YAB1<---------YAB1  --------->WOX13(1)  ----   gaggggacgcttaatgaatctcaaatcaattataaagatcaatccagttatgaacaattggttatgaatagaagaaagtcaatgaatcttaaaccgaatt  6776000                   <---------HSFB2a(1)      ---------->DOF2     <---------WRKY38(1)     <---------WRKY45     <---------WRKY12            -------->ATHB1    --------->WRKY18(1)          --------->ATHB12   <--------ZAP1  <-----------ARR10  <------MYB46(1) --------->GLK1(2)  <------MYB83    <---------ARR14(2)  <---------DEAR3(2)             --------->ATHB51 <---------MYB46(3)--------->HSFC1(2) <---------DEAR3(1)--------->HSFB2a(1) ---------ORA47(1)--------->ARR14(2)                                     ---------->DOF2 ----MYB46(1)     ------->TEIL  <---------YAB1               --------->DAG2----------->GT1 -->ARR14(2)      <---------ARR11(1)             ----------->GT1   <---------LBD16 <----------ID1 ----MYB83       <---------CCA1(2)              ----------->GT1 --------->ALFIN1---------->DOF2     - ---ARR14(2)     <---------ARR14(1)      >>>>>>>>>TBF1     ---------->DOF2--------->DAG2           <- ----->MYB59     <---------GLK1(2)       ------------------------>ANAC81 <XXXXXXXXXXXXXXXXXXXXMIR4239   tggtcggtcaaagtaaaccgaatctcccaattctattattgaagaagaaactgataaaaacaaaaggtttggggagaaagtgaaaagaacaaaaacatga  6776100                        --------->ANAC58           --------->ANAC58  --------->ANAC46           <---------HSFB2a(2)           --------->ANAC58  --------->bZIP60(2)   <---------At4g35610      <---------TOE2(3) --------->ANAC58        <---------ANAC46     ---------->DOF2 <---------ZAT18            <---------ANAC58                   ------------------   <----------CDC5   --------->ZAT14            <---------ANAC58                   ------>ZmHOX2a(1) --------->ANAC58    ------------>CBF        <---------WOX13(1)         <----------DOF2 --------->ANAC58    --------->ZAT18        <------------CBF         *TSS         --------->TOE2(3) -------->ZAT18  --------->DAG2          <---------TOE2(3) ---------->DOF2    <---------ANAC58  <---- -----ZmHOX2a(1)---------->DOF2       <---------AHL20(2)--------->HSFB2a(2)   <---------ANAC58 ------   aggacgctaaggcaaacaaaaagtgcaatccacatcagaatttatggattgcttgctgctagaaagctctgtttctttttgcttccttagacttctccgt  6776200                                        <---------CCA1(1)                                        <---------RVE1(1)                                       --------->ARR11(3)                                       <---------ARR11(3)                                     ----------->ARR10                                 <---------ZAT2                                 --------->ZAT2                                --------->At4g35610  <-----------GT1                --------->At4g35610                 <----------DOF2        <-------- --->WRI1                        <---------At4g35610        <-----------GT1 <---------At4g35610 -----MYB52(1)          <-----------RAV1(2)                <-----------GT1  --------->At4g35610 --->LBD16  ------>NtERF2<---------TOE1(2)  <---------AHL20(2)    <---------ARR11(3)       ------->TEIL   cgattaacccttgccgaggtactgtctcaggtctcagcttagatatttattctatgcgatttttccaatttctttagcatctgctctgtaatgtatcatt  6776300                                                            --------->ARR14(2)                                            <---------ARR14(2)                                      <----------DOF2       <---------ARR14(2)    <---------ANAC46              --------->ANAC46     <---------ANAC58       --------->ETT(2)    <--    <---------ANAC58              --------->ANAC58     <---------ANAC46<---------DAG2            ----    <---------ANAC58              --------->ANAC58     <---------ANAC58<----------DOF2       <------- -YAB1                  ---------->DOF2     --------->ARR14(2)      <-----------GT1      <---------ZAT18   ctggtttcgttttgcaattttgtattcaaagacaacacgactttggtatctgggttttcgtgaatccttgtaactttttgtcgatcgatcgagcactttg  6776400                                                                                    <---------HSFB2a(2)                                                                                    --------->HSFB2a(2)                                             <-----------GT1                    <---------ANAC46                                      <---------TOE2(3)                         <---------ANAC58                                --------->AHL20(1)                              <---------ANAC58       ------>ZmHOX2a(1)        <---------AHL20(1)                           --------->GLK1(1) <----------DOF2                --------->AHL20(2)                          --------->ARR14(2) ---------GT1                  <---------AHL20(2)                       <---------LBD16             - ------>ID1         --------->MYB52(1)<---------TOE1(3)        <---------YAB1<---------GLK1(1)     -- ---DOF2          ----------->HVH21<---------AHL20(2)      <----------DOF2  <---------ARR14(2)     --   tttcttttcctgcacaatgtctgaacggactaaatattttaaggtttttgctctcttggagctttattgttgttttcggatttcgtctgggaatttctca  6776500            <---------YAB1          <---------At4g35610          --------->At4g35610      <-----------HVH21 -------->DOF5.7(2)                                                               <---------ARR11(3) ------->TOE1(3)                                      <-----------GT1      <----------DOF2 ------->TOE2(3)                       --------->MYB52(1)      <---------TOE2(3)  --------->ARR11(3)   acgttatccgtctgatgaatagaatagttcgaattgggaacgaagggatgttgtttttacttcttaatgttatctcactttgaagttcttaagaatttta  6776600                                                                                                   <-                                                                                                  ---                                                                                            <--------                                                                                         <---------AHL20(2)                                                --------->YAB1                          --------->AHL20(2)                                               <-------TEIL                       ----------->RAV1(2)              --------->GLK1(2)         <---------AtLEC2                          --------->At4g35610      <----------DOF2            <---------MYB52(1)         ----------->GT1       <---------At4g35610   gatttgaactttgaagaatgtggtatttgttttctgttatgtccatggattcatcatccatgttgttaaaaatgctacaatctcacctgatttaatcaat  6776700  Previous    Next  AGI:  At5g20050.1    Description:  protein kinase family protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65620.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 6774304    to: 6775847    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g20060.1    Description:  phospholipase/carboxylesterase family protein. similar to phospholipase/carboxylesterase family protein [Arabidopsis thaliana] (TAIR:AT1G52700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65622.1); contains InterPro domain Phospholipase/carboxylesterase (InterPro:IPR003140) Range:  from: 6776169    to: 6779616    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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