Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    <                                                                                  --------->ANAC58 --                                             <---------ICU4                       --------->ANAC58 <-                                            <---------YAB1             --------->At4g35610        <--                                         --------->ICU4                --------->ZAT2           -----                                     --------->At4g35610               <---------ZAT2         <------                                     <---------ZAT14                   <---------At4g35610    -------                           --------->MYB52(1)--------->ATHB12        <---------ZAT18          <------                         ----------->HVH21--------->YAB1            <---------ANAC58       <---------                      ------->TEIL   <---------At4g35610            <---------ANAC58   <---------At4g35610   ttagagagtacaagtgagaaaatggacctgaacggagtcagcactgatgatttcgccattgagtcgcttagcgagctccatggcaagtctgctctttcct  6770800       <---------PCF5       --------->TCP20       --------->TCP11(2)       --------->TCP15(1)                                                                         <--       <---------PCF2                                                                            <---       --------->TCP16(1)                                                                        <---       --------->PCF2                                                                            ----       --------->PCF5                                                                            ----      ----------->TCP11(1)                                                                    -------      <---------TCP16(2)                                                                    ---------      <---------TCP15(2)                                                                   <---------ANAC46     <---------MYB46(3)                                                                   <------NtERF2     --------->ABI4(2)                                                                    <---------At4g35610    --------->ALFIN1                                                                     <---------ERF1   <---------MYB52(1)                                                                   <---------RAP2.3(2)  <---------DEAR3(2)                                                                   --------->At4g35610 <---------ATERF1(2)                                                                   <---------At4g35610 --------->DEAR3(1)                                                                    --------->ATERF1(1) <---------DEAR3(1)                                                                    <------NtERF2 --------->ATERF1(2)                                                              --------->ALFIN1<-- ---------LBD16                                                                   -------------->OsCBT -------->ATERF1(1)                                                               <---------AtMYB61 ------NtERF2                                                                   <---------ANAC58<---- ---->NtERF2                                                                    <---------ANAC58----- --------RAP2.3(1)                                                        <---------ZAT2<---------RAP2.3(3) -------DEAR3(1)                                                          --------->ZAT2<---------DEAR3(1) ->ZmHOX2a(1)    --------->YAB1                                    <------ZmHOX2a(1)  <---------MYB46(3) ---ANAC58    --------->GLK1(1)                                 <---------At4g35610  <---------RAP2.6(2) ---->RAV1(2) <---------GLK1(1)           <----------DOF2       --------->At4g35610<---------MYB46(3) ---ANAC58<---------HSFB2a(2)    <----------DOF2       <-----------GT1    --------->ZAT14<---------RAP2.3(1) -DOF2<---------TCP23     <---------DAG2  <---------DAG2    <-----------HVH21   <---------ANAC46<----   gcgccggtgggcccagaaatcacaatcaccttctccttttcagactttttcttcttgttcccgttcagaggaacagagcaggccgtggtggctgcgcaga  6770900      --------->ZAT14      ------>NtERF2      <---------ZAT18     --------->DEAR3(1)    --------->RAP2.3(1)   ------>NtERF2   --------->LBD16   <---------ATERF1(1)  <---------DEAR3(1)  --------->ANAC46                  --------->ANAC46           <---------ALFIN1 <---------LBD16                    --------->ANAC58        --------->ANAC55(1) -------HSFB2a(1)                   <---------ANAC55(2)     --------->ANAC46 ------ARR14(2)         <-------GAMYB  --------->MYB52(1)   --------->ANAC58 --------ARR10         <---------MYB46(3)         <-----------HVH21                --------->MYB52(1) ----->GLK1(2)         --------->MYB55(2)      <---------ANAC55(2)       --------->YAB1 ----->ARR14(2)        <---------DEAR3(2)      --------->ANAC55(2)      --------->MYB46(3) ---->ARR10           <---------DEAR3(1)      <-------TEIL  <---------ANAC55(2)  <---------YAB1 >LBD16<------NtERF2  <---------DREB2C(2) <---------------AtSPL8        <---------ATHB12          <-- -------GLK1(1)       <---------RAP2.6(2) <---------------AtSPL3      --------->WOX13(1)        <---- -----ARR14(2)        <---------ANAC46----------->HVH21     --------->ANAC58   --------->YAB1   ----- ---->ARR14(2)   <---------ANAC58   --------->ANAC55(2)  --------->ARR14(2)   <---------YAB1   ------ -----GLK1(2)    <---------ANAC58   --------->ANAC58     <---------ARR14(2)<---------YAB1 --------->MYB52(1)   atctccggcgcagtacaaggcttggcggttgaagtctcaagtaacaggtacgggtcaaaaatacgccactgccaatcaccattataaacggataacgaag  6771000                                                    <-------TEIL                  ---------->DOF2                                                <---------TOE2(3)               --------->ANAC58                                          <---------ARR14(2)                    --------->ANAC58                                         <---------GLK1(1)                     --------->LBD16                                         <----------TaMYB80                  <---------LBD16                                         --------->CCA1(2)                   --------->LBD16                                         --------->GLK1(1)               --------->ARR14(2) --------DOF2                           <---------ARR14(2)               <---------ARR14(2)         < -----HSFC1(2)                          --------->ARR14(2)            --------->SPL7        <-------- ---->HSFC1(2)                       <---------ANAC46                <------ZmHOX2a(1)      --------- ->TEIL                             <---------LBD16<--------P     <------ZmHOX2a(1)  <---------At4g35610   ctttgaaatttagaatttggaagatagcacaagtttgctacggatatactgaggttgatagaagggaaggaggacgacccgcgcgaaagctcatctcgaa  6771100                                             <------MYB46(1)                                             <------MYB83                ----------->GT1                                            --------->MYB59       --------->ANAC58                                            <---------AtMYB61     --------->ANAC58                                          <---------MYB52(1)     --------->TOE1(2)                                         <-------GAMYB          --------->MYB46(3)                                        <------MYB46(1)         ---------->DOF2 --------->CCA1(2)                      <------MYB83          ------>MYB46(1)    <-----------GT1 ----------ID1                         --------->MYB59        ------>MYB83     --------->AHL20(2) -HSFB2a(2)                          <---------MYB52(1) ---------->DOF2 *TSS   <---------AHL20(2) >HSFB2a(2)  <---------ZAT18        <---------SPL7   --------->ANAC46 --------->MYB52(1)   gagagacgaagacagtgagcaagggattagagaactacggttcggttaggtttacacataaaccgaacaagcgaaccgaaattaaacggtttacttaaac  6771200                                         --------->ANAC46                            <---------ZAT6                                                       ----                            ----------->GT1    ------->GAMYB                                     ----                          <---------ANAC58    --------->MYB46(3)                                <----                          <---------ANAC58   --------->ANAC58                                   <----      --------->YAB1      <---------ANAC46   --------->ANAC58    <---------ANAC55(2)           <-----    <-------GAMYB    --------->YAB1<---------AHL20(2)          --------->AHL20(2)             ------>ZmHOX2a(1)   ----------->GT1  <---------YAB1 --------->AHL20(2)     ------------>CBF       --------->WOX13(1)   ctagacagttataaacgatgttatcatgtcgtgttaattacttacacaaccaaaaaatggaacaattacatatggtttttgatcaattacagggtcctat  6771300                           <---------ARR14(2)                           --------->ARR14(2)                          =======================HOX2a_HOX2a  <------MYB83            <------ZmHOX2a(1)  <------MYB46(1)        <------MYB83 <---------TOE2(3)       <------MYB46(1) --------->MYB59       <--------P                                                         --------->ANAC55(2) ----->YAB1          <------MYB83                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->ATHB12        <------MYB46(1)                            --------->AHL20(2)        <---------ANAC55(2) -----YAB1          <---------MYB46(3)             <---------ARR11(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -----ATHB12       <--------P ----------->HVH21    <---------AHL20(1)     <------ZmHOX2a(1) ----TOE1(2)   --------->ETT(1)           <------ZmHOX2a(2)     <---------AHL20(2)<----------DOF2   gattaggttttttatggtcgggctggtaggattcgaccggttcgatccatctatatattcgaaaatttaaattataggatgtgtctttagtcaagtgatt  6771400                                              <---------YAB1                                           --------->ICU4                                           <---------YAB1                                         --------->YAB1                                        <---------YAB1                      <-----------GT1                                       <-----------GT1                 ----------->GT1                                      <-----------GT1                  --------->RAP2.6(2)          -            <-----------GT1     <---------AHL20(2)    --------->GLK1(1)<---------ANAC46        ====== <-------TEIL       --------->TOE2(3)<---------AHL20(2)           ---------->DOF2              <-----   aagttcatttgattttacattttcttaaatctatttgattttatcatttttatcggagttcgactctattaagccgtataacctcgcctatgtagtagga  6771500          ------>ZmHOX2a(2)          <---------LBD16        --------->ARR14(2)        <---------ARR14(2) <---------ANAC46 <---------ANAC58          <---------ATHB12              ----------->GT1 <---------ANAC58         ------>MYB46(1)         <---------REM1(1) -------->MYB59           ------>MYB83           <---------ARR11(3)                                 < ================HOX2a_HOX2a   <-------TEIL--------->ARR11(3)                            <---------AHL20(2) -ZmHOX2a(1)      <---------YAB1   ---------->DOF2----------->GT1                     ----------->GT1   attgggtatggatcgggattataaaaccaaacatacataaagaaatatcaagatgtaacatgtaaaattagtcatatacagagacaagtagtttattgaa  6771600                                                                      --------->TGA1a                                                                      --------->ANAC58                                                                      --------->O2   <---------ICU4                                                                      --------->ANAC58                                                            ====================bZIP_DOF      -------                                                            <----------DOF2          --------->ATHB12                               <---------ZAT18              ------>ZmHOX2a(1)       <---------YAB1                               --------->ZAT18             --------->TOE2(3)   <---------ANAC58         <---------ZAT6        <---------ZAT14          <---------ARR14(2)     <---------ANAC46  ----------->RAV1(1)          --------->ZAT14          --------->ARR14(2)     <---------ANAC58  ------->TEIL        <---------YAB1                   <---------CCA1(2)  --------->HSFB2a(1) ------- -------TEIL<---------YAB1     <-------TEIL--------->HSFB2a(2)        ===============================   gatgcaccatagtgatcatatatgttgattaagtacacttgttctctcgaataagtcatatcctttgtagccacgactgttccttgatcattggccacga  6771700  Previous    Next  AGI:  At5g20040.1    Description:  ATIPT9 (Arabidopsis thaliana isopentenyltransferase 9); ATP binding / tRNA isopentenyltransferase. similar to ATIPT5 (Arabidopsis thaliana isopentenyltransferase 5), transferase, transferring alkyl or aryl (other than methyl) groups [Arabidopsis thaliana] (TAIR:AT5G19040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39375.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) Range:  from: 6767799    to: 6771172    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g20045.1    Description:  unknown protein Range:  from: 6771560    to: 6772190    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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