Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------MYB52(1)                                                                                <---------ANAC55(2)                                                                                <---------ANAC58      <---------DAG2                                                        --------->WOX13(1) ----ICU4                                                         ------->GAMYB <---------ANAC58 --->YAB1                                                        <---------MYB55(2) -->HAHB4                                                        --------->MYB46(3)     <---------HSFB2a(2) ---YAB1            <---------ATHB12                           --------->MYB52(1)--------->LBD16 -->ICU4            --------->MYB46(3)            <----------DOF2<---------MYB52(2)     --------->HSFB2a(2) >YAB1<----------DOF2        <---------AtLEC2<-----------GT1 <---------ATHB12   --------->ANAC55(2)   tcggataactttttgtttggcaaccattcttgcattgaagaatgaagtaaccctttccctcaaatcaacgaccgatttcaatccgtgattccagacattt  6762300                                                                       --------->HSFB2a(2)                                                                       <---------HSFC1(1)                                                                       --------->HSFC1(1)                                                                       <---------HSFB2a(2)                                                                 <---------AHL20(2)          --------->At4g35610                                   <---------AHL20(2)          <---------At4g35610         --------->At4g35610       --------->AHL20(2)  <------MYB46(1)       <---------MYB52(1)             <---------At4g35610      <---------AHL20(2)   <------MYB83   <-      <-----------HVH21    <---------HSFB2a(2)           <---------ANAC46      <---------YAB1    <---     ------->GAMYB         --------->HSFB2a(2)  <---------AHL20(2)    <---------LBD16     <---------AHL20(2)   tcttcaaccgtgagctctaagaccaatttctgcaagtttgagcttaagaatttatcgatgtgtatattaatttctggaaatattgttggtattaatatgt  6762400                    --------->TOE2(3)                   --------->ATHB12                   <--------HAHB4                   <---------ICU4           ---------->DOF2         --------->TGA1a           ==================================bZIP_DOF    <---------AHL20(2)             <---------O2    --------->AHL20(2)             <---------TGA1a                      <---------ANAC55(2)     -----    <---------AHL20(1)         <-----------HVH21                        <---------ANAC46   --------->AHL20(2)   --------->AHL20(2)        ------->TEIL                            <---------MYB52(1)    <---------AHL20(2) --------YAB1     --------->ICU4   <---------ANAC55(2)              <-----------HVH21 ------>ZmHOX2a(1) --------GT1      <---------YAB1   --------->O2                    --------->ANAC46  --------->TOE2(3)   taccattaaatttgaaaggcatcattagatggatgtcatgtgagtgagtacttgaaattttgaaactatccgttacggacaataaatccttatttaaatg  6762500                                                                      <---------AHL20(2)                                                                  --------->AHL20(2)                                                              --------->AHL20(2)                                                              <---------AHL20(1)                                                              --------->AHL20(1)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                     <------ZmHOX2a(1)--------->AHL20(2)                                                    --------->ANAC46 <---------AHL20(2)                                                --------->CCA1(2)<---------AHL20(2)                                          --------->TOE1(2)   <---------ARR11(3)                   --                               --------->YAB1--------->ANAC58 <---------AHL20(2)                 <---    ----------->GT1       --------->AHL20(2) --------->ANAC46 --------->ARR11(3)              ======= ---->ATHB12              <---------AHL20(2) --------->ANAC58--------->AHL20(2)               <------ZmHOX2a(1)   atttgttagtaaaaaactatgctacaaataaaatcaaaacttcacatacgatacaggaaataaatatattatttattttgtcaaaactcaaaaccaggac  6762600                                  <---------At4g35610                                  --------->At4g35610                                  <---------ZAT2                           --------->ZAT14                           <---------ZAT14                  --------->CCA1(2)                                                               ---                  <------ZmHOX2a(2)          <------------CBF                                     ---                 --------->ARR11(3)        <---------ARR14(2)                                     ---                 --------->AGP1   --------->ZAT2                                               ------                 <---------ARR14(2)        --------->ARR11(3)                                  ------                 --------->ARR14(2)   <---------ANAC58                                         ------    ----------->GT1       --------->ALFIN1 <---------ARR11(3)                          <----------ID1  --------->At4g35610   ------->GAMYB <---------ANAC46                                 <---------ANAC58  <---------At4g35610--------->MYB52(1)  ----------->ARR10                             <---------ANAC46 -------->DOF2   <---------ARR11(3)   <---------ANAC58                --------->MYB52(1)<-----------HVH21 ------MYB59 ---------->DOF2   ---------->DOF2           ---------->DOF2    ----------->GT1    ------ ========================HOX2a_HOX2a <-------TEIL      <XXXXXXXXXXXXXXXXXXXXMIR773B    <---------ANAC58   ctaaagctgaaaaaaaaaagatccaacggtgcagaaagctgcgtagatattggagagccaaaagatggaatctaacggtggaaaaaatagcgtcaaacct  6762700         ------>MYB83         ------>MYB46(1)    --------->ARR14(2) ------>ANAC58               <-----------GT1                ------>NtERF2 ------>ANAC58             <---------AHL20(2)               <------NtERF2 ------>ANAC46            *TSS                             --------->DEAR3(1) --->TOE1(2)             <---------YAB1                    --------->RAP2.6(2) --->TOE1(3)          ------>ZmHOX2a(1)      --------------------->WRI1                       ------- --->TOE2(2)      <-----------GT1   <---------CCA1(2)     --------->RAP2.3(1)     ------>NtERF2 --->TOE2(3)   <---------GLK1(2)  <---------ALFIN1      --------->ANAC46         --------->ANAC46   aagccaaaacctcccaaaattctccttattaaaaccccatctctctccctagtccctctcgccgcatcgcttcttaaacctcgacgacatcaacgtctga  6762800                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                         --------->ANAC46                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                        --------->KAN4(2)   --------->GLK1(1)      --------->ARR11(3)         <------                       <---------KAN4(1) --------->LBD16           <---------ARR11(3)     <-------GAMYB         ------>ZmHOX2a(1)             <---------LBD16             <---------AGP1 <----------DOF2 ---->HVH21----------->HVH21       <----------DOF2                <---------CCA1(2)      <---------ANAC46   cttcgcttctcctctcacatggtgaacattctcttctcttttcccgatttcttcgtcttgtagtatttagatctcacgagatcgcttaatttcgttgatg  6762900                                                             --------->MYB52(1)                                                            ------->GAMYB                                                           <---------MYB52(2)                                                           <---------MYB55(2)                                                           <---------MYB111(2)                                                           --------->MYB46(3)                                                          ------>MYB83                                                          ------>MYB46(1)                                                         ----------->RAV1(1)                                                        ------->GAMYB                                                       <---------MYB55(2)                                                       --------->MYB46(3)                                                     ------>MYB46(1)                                                     ------>MYB83                                                     --------->MYB52(1)                                                   <---------MYB46(2)                             <--          <---------ARR14(2)                       <---------MYB59                                <--          --------->ARR14(2)                       <---------MYB111(2)                            <--      <---------LBD16            --------->ARR11(3)<---------MYB111(1)       <---------TOE1(2)   <---     <-----------GT1             <---------ARR11(3)<---------MYB52(2)       ------>ZmHOX2a(1)   <---- <----------DOF2                <---------GLK1(1)  --------->AtMYB61     <---------YAB1       ------- ---TOE2(3)   <-----------GT1   --------->GLK1(1) --------->ANAC46   <---------GLK1(2)       <-------   tttcttttttcggattttactgaattttgttgtgatatcttgttcaggctctacctaaccaacaaaccgtagattatcctagcttcaagctcgtcatcgt  6763000 ----MYB83 -------MYB46(3) ----MYB46(1)                                                             ------>ZmHOX2a(2)  <------- ------DEAR3(1)                                             ------>ZmHOX2a(2)              <---------ALFIN1 -----MYB52(1)  <-------TEIL             ---------->ID1    <---------GLK1(1)       <---------At5g28300 -->ATHB12 <-----------RAV1(2)          <-----------GT1   --------->ARR11(3)      <-----------GT1---- --YAB1 <------NtERF2         <---------ANAC46            <---------ARR11(3)  <----------DOF2--------   tggtgatggaggcacaggtacagtattcttcgccgtgttttttgacctattgttttttgtgatctctgaaatttgatcgtcttttcactgtccccatctg  6763100                                            --------->ATHB12                                           --------->ICU4                                <---------YAB1                             --------->GLK1(2)                            <---------ARR11(3)                       --------->YAB1      ----------->GT1                            --------->ARR11(3)  ----------->ARR10   <---------YAB1       <------MYB46(1)                          <---------TOE2(3)<---------YAB1 --------->ATHB12               <------MYB83 --At4g35610         <---------ARR14(2)  --------->At4g35610  <------MYB46(1)          <---------WOX13(1) ------>DOF2         --------->ARR14(2)  <---------At4g35610  <------MYB83           --------->ATHB12 ->At4g35610    --------->CCA1(2)       --------->ALFIN1 <---------YAB1     <---------YAB1     ------   aaagcattctcgtttaagagacggatttgagattttgatgatgtgctgattagatttgtacgattggtttttgataatatcaatgtttgattggttttaa  6763200  Previous    Next  AGI:  At5g20020.1    Description:  RAN2 (Ras-related GTP-binding nuclear protein 2); GTP binding. Identical to GTP-binding nuclear protein Ran-2 (RAN2) [Arabidopsis Thaliana] (GB:P41917;GB:Q94K33); similar to RAN-1 (RAS RELATED NUCLEAR PROTEIN), GTP binding [Arabidopsis thaliana] (TAIR:AT5G20010.1); similar to putative RAN2 small Ras GTP-binding nuclear protein [Allium sativum] (GB:ABD17865.1); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, R Range:  from: 6762726    to: 6764673    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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