Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <----------CDC5                                    --------->At4g35610                                    <---------At4g35610                                   --------->DEAR3(1)                               --------->MYB46(3)                             --------->AHL20(2)                              --------->CCA1(2)                               <---------AHL20(2)                              <------ZmHOX2a(2)                              --------->AHL20(2)                             <---------ARR11(3)                            --------->TOE2(3)                             --------->ARR14(2)                        --------->ZAT14                             <---------ARR14(2)                        <---------ZAT14                             --------->ARR11(3)                        --------->ZAT18                             --------->AGP1                          --------------->AtSPL8                            --------->GLK1(1)                        <---------------AtSPL8                        --------->TOE1(2)                           <---------ANAC46                       ----------->RAV1(2)                          <---------ANAC58             ----    <---------AHL20(2)------->TEIL--------->MYB46(3)   --------->ATHB12<---------ZAT18           ---- ------ID1       <----------DOF2<---------ALFIN1--------->YAB1      <---------ANAC58        <--------   gacaaaataatcgacatagctttgtacctgagatccaccgctgaggtcaatagtgagtgatttgaatttggagtgtacattaatttagaaattcaaccca  6759900     <-------MYC2     ------->MYC2     <-------MYC3     ------->MYC3                                   <---------YAB1           <---------AHL20(2)  <---------ANAC46                              --------->ARR11(3)          --------->AHL20(2)      -  <---------ANAC58                              <---------ARR11(3)         <---------YAB1        ----  <---------ANAC58                          --------->YAB1 <---------YAB1--------->YAB1         <---- ----->ZAT2  --------->YAB1                 --------->AHL20(2)    <---------ANAC46   <---------TOE2(3) ------->RAV1(2)<---------AHL20(2)  <---------YAB1  ------>ZmHOX2a(1)    <--------HAHB4      -------- ---------AGL1  --------->ATHB51 <---------MYB52(1)--------->TOE2(3)    <---------YAB1----------->GT1   tctggcatgtgtcaagaataatttgaaaactatccgttatgaacaataaaaatccttattgatgaatggtgtctattattaaaaattgaggtataaatat  6760000                 <---------AHL20(2)                --------->AHL20(2)       --------->ARR11(3)                <---------AHL20(1)       --------->AHL20(1)                --------->AHL20(1)      <---------CCA1(2)             --------->AHL20(2)        --------->ARR14(2)             <---------AHL20(2)        <---------ARR14(2)             --------->AHL20(1)       <---------CCA1(2)         --------->AHL20(2)      ------>MYB46(1)        <---------AHL20(2)       ------>MYB83    --------->AHL20(2)          --------->MYB52(1)      <---------AHL20(2)  ----------->GT1--------->AHL20(2) ----------->GT1     --------->AHL20(2) --------->DOF2 <---------AHL20(2)  <---------ANAC46   --------->AHL20(2)                 ----------- ----->YAB1 <---------AHL20(2) --------->AtMYB61       <---------AHL20(2)               ---------->DOF2 -----YAB1  --------->AHL20(2)--------->MYB46(3)     ------->TEIL                  ---------->DOF2 ->ICU4 --------->AHL20(2)   <--------------OsCBT --------->ICU4            ----------->GT1   gataaagaaaataaataatttattttgtcaaaaccaacgcgtatatattgtaatgaatttaatttcaaaatttgctaaatgtgaaaaaaggaaagaaaaa  6760100                                                           <---------At4g35610                                                           --------->At4g35610                                                           <---------ZAT2                                                   --------->ALFIN1                                                 ------->GAMYB                            ---------->DOF2   --------->MYB52(1)                          <---------MYB59  --------->CCA1(2)        <---------YAB1                        ------->TEIL       <------ZmHOX2a(2)       --------->AHL20(2)                      --------->WRKY38(1) --------->AGP1   --------->ZAT2                      --------->WRKY12    <---------ARR14(2)    --------->TOE2(3)                     --------->ALFIN1     <---------ARR11(3)   ----------->GT1                 ------                    <-------MYC3          --------->ARR14(2)   <---------ANAC46           ---------->DOF2                    ------->MYC3          --------->ARR11(3)  <-------TEIL          ---------->DOF2-- >GT1              <---------ANAC46   ---------->DOF2   ---------->DOF2            --------->TOE1(2)   tcaatgccgatgaatgagtacgcgtggacctaaagctagaaaaagatccaacggtggagaaagctgcgttaaaattgcagaagaaccaaagagaaagaat  6760200                         ---------->DOF2                     <---------At4g35610                <---------ANAC58                <---------ANAC58            --------->ZAT14           <---------REM1(1)    ------------>CBF --------->At4g35610  ------->GAMYB <---------ANAC46                     ----------->TBP --------->MYB46(3)<---------WRKY12        <<<<<<<<<SARD1 --->GLK1(2)<---------ZAT14     <---------ALFIN1  <----------DOF2 ------->MYB52(1)<-----------HVH21         <<<<<<<<<CBP60g   ------------>CBF         *TSS         --   ccaacggccaatagtgtagcgtcaactcaaagccaaaccctcccaaatttctcttttaaaaaccccaatctctctctccctctccatcttcattctccct  6760300                                            <---------STY1(2)   --------->At4g35610                      --------->ZAT2   <---------At4g35610       <---------ARR14(2)                                                 <<<<<   <---------ATERF1(1)       --------->ARR14(2)                                            --------->GLK1(1)   ------>NtERF2   --------->AtMYB61        <---------ZAT2                            <---------At5g28300  --------->DEAR3(1)    ----------->RAV1(2) --------->STY1(2)                --------------------->WRI1 ------->ANAC46 --------->ZAT6          ------>ZmHOX2a(1)          <-------TEIL      <-----------GT1<   ctcgccgcttccttcttaacaccatcgcctgaattcgctctcctctagctcgcgattgcgaaaacatggtacatgttctcttcgattttaccgatttctt  6760400                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                  --------->GLK1(1)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                    <---------ARR11(3)                                    --------->ARR11(3) --------->ANAC46                                ==========================HOX2a_HOX2a                                <------ZmHOX2a(1)<---------AGP1<---------ANAC58                                =========================HOX2a_HOX2a                            ------>ZmHOX2a(2)    --------->AGP1<---------ANAC58                          <---------ARR11(3)     <-----------ARR10    <---------HSFC1(2) <<<<TBF1 --------->YAB1  --------->ARR11(3)    <---------CCA1(2)     --------->HSFC1(2) ---------ANAC46      --------->TOE2(3)   <-----------HVH21    <---------ANAC46   >>>>>>>ZML2     <--   cttcgtgtattatcagattgtataccttgatctaggattatctccgtctcagatctcacgagattgcgtcgatgtttccatgttctagtttctaatttcg  6760500                                 --------->MYB52(1)                              --------->At4g35610                             --------->ANAC58                             --------->ANAC58                           --------->MYB46(3)                         --------->MYB52(1)                         ------>MYB46(1)                         ------>MYB83                                                    ------------                       <---------MYB111(1)                    <---------YAB1             --------->ANAC58                       <---------MYB59                    <---------ANAC58               --------->ANAC58                       <---------MYB111(2)        <---------At4g35610 <------MYB46(1)   --------->SPL7           <-----------GT1-------->P              <---------ZAT2  =============================RAV     <---------AHL20(1)<---------MYB46(2)         --------->ZAT2 <---------YAB1     <---------------AtSPL3     <---------ARR11(3)<---------MYB52(2)         --------->At4g35610 <------MYB83 <-----------RAV1(2)     --------->ARR11(3)--------->AtMYB61         <---------TOE1(2)<-----------RAV1(1)   <-------TEIL -------ANAC46        --------->ANAC46   <---------GLK1(2)<---------ANAC58      <------NtERF2   tcgtggatatatttttcaggctctacctaaccagcaaaccgtagattatcccagcttcaagcttgtcattgttggtgatggaggcacaggtacggtactc  6760600                                    <---------GLK1(1)                                             <--                              <---------ANAC58            ----------->HVH21                  <-------                              <---------ANAC58          <---------ANAC58                     <-------                              <---------ANAC46      <---------WOX13(1)                 <---------GLK1(2)                             --------->ATHB12     <---------MYB46(3)                   <---------ARR11(3)                         <---------ICU4           --------->ATHB12 --------->CCA1(2)   <---------ARR14(2)                        <---------ATHB12         <---------YAB1 <---------ZAT6         --------->ARR14(2)  <---------ANAC46    --------->WOX13(1)<---------ANAC46<---------ANAC58           <---------At4g35610 --->AtSPL3          --------->AHL20(2)<---------TOE2(3)<---------ANAC46<-------TEIL   --------->ARR11(3)   ttcgccgtgtttttttttatcgattaatcaatgcttggatttacgttgatggtgattggggtgatagagataggctcatatgctaagcagattttgctag  6760700                                                                                                   <-                                                                                                 <---                                                                                              <------                        <---------ARR14(2)                                                 <---------                  <-----------RAV1(1)                                                     <---------ANAC58                --------->SPL7                                                            <---------ANAC58    <----------DOF2    <---------CCA1(2)                         --------->ATHB12      <---------WOX13(1) -------ZAT18 <---------SPL1(2)                     --------->YAB1>>>>>>>>>ARR2     <---------YAB1<-- --ANAC58    --------->ANAC55(2)                    ----------->GT1<---------WOX13(1)--------->ATHB12 --ANAC58    <---------ANAC55(2)        --------->ATHB12        <---------YAB1   --------->TOE2(3)---   tcgactctttataatccgtactgttgtatccagtggctcaattgatttcaagtatggtaatgtgttttgattgttttgctaaacctttgattgcttttgg  6760800  Previous    Next  AGI:  At5g20010.1    Description:  RAN-1 (RAS RELATED NUCLEAR PROTEIN); GTP binding. Identical to GTP-binding nuclear protein Ran-1 (RAN1) [Arabidopsis Thaliana] (GB:P41916); similar to RAN2 (Ras-related GTP-binding nuclear protein 2), GTP binding [Arabidopsis thaliana] (TAIR:AT5G20020.1); similar to putative RAN2 small Ras GTP-binding nuclear protein [Allium sativum] (GB:ABD17865.1); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225) Range:  from: 6760286    to: 6762096    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version