Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------>NtERF2                     --------->LBD16                                                    =============                   <---------LBD16                                                      <------ZmHOX2a(2)                <---------GLK1(1)                                          <---------ARR11(3)            --------->ANAC58                   --------->LBD16             --------->ARR14(2)            --------->ANAC58                  --------->LBD16              <---------ARR14(2)        --------->ANAC58                     <---------LBD16               --------->ARR11(3)        --------->ANAC46             --------->At5g28300                   <---------ARR11(1)        --------->ANAC58            ----------->GT1                        <-----------ARR10      --------->MYB52(1)          <---------LBD16                         --------->GLK1(1)    <-----    <---------MYB52(2)------>NtERF2 --------->LBD16                       <---------CCA1(2)   <------   tggaaaacaaacggaagcaactccggccatccattctccggtaaaatcccggatgcaagttcagagactgtatcgcaaatcttcttagagatcgatttag  6700900                                              <---------ANAC58                                              <---------ANAC46                        <---------ANAC58                                              <---------ANAC58                        <---------ANAC55(2)                                             --------->ATHB12 <---------TGA1a         <---------ANAC58                               --------->CCA1(2)              --------->O2            <---------ANAC46  ------>ZmHOX2a(1)           <---------ARR11(3)              <---------O2  --------->ANAC58 ========HOX2a_HOX2a          --------->ARR11(3)            --------->CCA1(2)         --------->ANAC55(2) ------GT1                    --------->ARR14(2) <---------ZAT14            --------->ANAC58        < -----GT1                     <---------ARR14(2)--------->ALFIN1  ------>NtERF2   <-----------HVH21--   cctcctcatgttgaatacaatacaacatcgaagatttgagggaagattgagtggagagggagagacgaggccatagataagcatcgtcgcgtgttaacaa  6701000                <------NtERF2                ------>NtERF2               ------>NtERF2              <---------RAP2.6(2)              <---------DEAR3(1)              --------->DEAR3(1)             <------NtERF2             --------->ATERF1(1)             --------->At4g35610             <---------At4g35610            <---------ATERF1(1)            <---------DEAR4(2)            <---------RAP2.3(1)            ----------------------->TaNAC69(2)            <---------ORA47(2)           <---------RAP2.3(2)           <---------RAP2.6(2)           <---------DEAR3(1)          <---------ORA47(1)          --------->RAP2.6(3)    --------->HSFB2a(2)         <------ZmHOX2a(1)       <---------HSFB2a(2)                                        <--------  --------->LBD16               <---------LBD16                                            <---------ANAC58 <---------ANAC46              <---------LBD16                                     <---------LBD16 <---------HSFB2a(2)      <---------ALFIN1     --------->At4g35610               --------->ARR14(2) --------->HSFB2a(2)     --------->ANAC58      <---------At4g35610    ---------->DOF2      <---------ANAC58 ---------LBD16--------->RAP2.6(2)          ---------->DOF2     --------->ANAC58 <---------ARR14(2) ------->MYB52(1)        --------->ANAC58<------ZmHOX2a(1)      --------->ANAC58<---------GLK1(1)   cttccggagaaggacggcggccatagcacgaccttcgggatgaggagaaagctgaagaagatgagcaagcttcaaagagagggtatcgggattgctttgt  6701100                                                                                             <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                  --------->ANAC58                                                                                  <------NtERF2                                   <---------ANAC58                               --------->ANAC58                                   <---------ANAC46                              --------->At4g35610                              <---------HSFB2a(1)                                <---------LBD16    -                              --------->HSFB2a(1)                                ------>NtERF2      <                        <------NtERF2                                           <---------ANAC46    -                      <---------DEAR3(1)                                <---------HSFB2a(2)<---------ARR14(2)                     <---------LBD16  <-------GAMYB                     --------->HSFB2a(2)--------->ARR14(2)                     <------NtERF2 <---------ANAC58                 <---------ANAC58 <---------ARR14(2)                   <---------DEAR3(1)<---------MYB46(3)  --------->ALFIN1      --------->ZAT18      < --DOF2   ---------->DOF2  <------ZmHOX2a(1)      --------->CCA1(2) <---------ANAC58 --------->ARR14(2)   ttagcgagattgaaaagagactcggcggaggaacgttgctcgttggaagaagacatgaggtgagagattagcgtctcgaagggcgcggaatcggagccga  6701200                                                               ----------->GT1                                                               <------NtERF2                                                              ------>NtERF2                                                              --------->LBD16                                                            <------NtERF2                                                            <---------LBD16                                                            --------->ATERF1(1)                                                           <---------ATERF1(1)                                                           <---------RRTF1(1)                                                           <---------DEAR4(2)                                                           ------>NtERF2                                                           <---------RAP2.3(1)                                                           <---------ORA47(2)                                                           <---------ERF1                                                           <---------RAP2.6(1)                                                          <---------ATERF1(2)                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------DEAR3(1)                                                          <---------RAP2.3(2)                                                          --------->ATERF1(2)                                                          <---------RAP2.6(2)                                                          <---------RAP2.3(3)                                                          <---------DREB2C(2)                                                          <---------RRTF1(2)                                                          <---------ANAC46                                                          <---------RRTF1(3)                                                         <---------ABI4(1)                                                         <------NtERF2                                                         --------->ATERF1(1)                                                       --------->ALFIN1 --------->AtMYB61          <---------GLK1(2)          <---------DEAR3(1) >ZAT2       <---------ANAC58                        <---------MYB46(3) >At4g35610  <---------ANAC58           --------->ANAC58<---------ERF1 -ZAT2   <---------ZAT2     <---------ARR14(2)       <------MYB83 -At4g35610  <---------ANAC46      <---------LBD16   <------MYB46(1)      <---------ZAT6 -------->MYB46(3)          --------->ARR14(2)      --------->ALFIN1      ----------->GT1---------->DOF2 ---------HSFB2a(1)     <---------At4g35610         <---------AtMYB61    <---------TOE2(3) -------->HSFC1(2)      --------->At4g35610  --------->ALFIN1<---------ANAC46    --------->DAG2 ---------HSFC1(2)--------->At4g35610   --------->ANAC58<---------ATERF1(1)     ---------->DOF2     <   gaaccatcgcgagttgcgcttgctgaagctgattcgcctcggaagccatgggggatggtggcggcgggaaaaactagggttaaaaagtggctaaagctaa  6701300              --------->ARR14(2)              <---------ARR14(2)             <------MYB46(1)             <---------HSFB2a(1)             --------->HSFB2a(1)                                 <---------AHL20(2)             --------->HSFC1(2)                                  <---------AHL20(1)             <---------HSFC1(2)                              <---------AHL20(2)             *TSS                                           --------->AHL20(1)             <------MYB83                                   <---------AHL20(1)    <---------AHL20(2)            --------->MYB59                              <---------AHL20(2)      --------->AHL20(2)          <------ZmHOX2a(1)                              --------->AHL20(2)<-----------GT1        <---------TOE2(3)                                --------->YAB1<---------YAB1             ---      --------->ICU4                                 --------->ICU4 <---------YAB1--------->AHL20(2)   <------ZmHOX2a(1)                   <---------TOE2(3)<---------YAB1<---------AHL20(2)          <-- ------ZmHOX2a(1)              <------ZmHOX2a(1)  ----------->GT1--------->AHL20(2)   <-----------GT1   gaggaggaatgaggaaggtccgaaggtagcgaaggagggatgaggttgtgaagggataattatatattttatttttatttccatttattttccaactatt  6701400                             --------->ATERF1(1)                            <---------RAP2.6(3)                            ------>NtERF2                            <---------ATERF1(1)                            <------NtERF2                           --------->RAP2.3(3)                           --------->RAP2.6(2)                           --------->RAP2.3(2)                           <---------DEAR3(1)                           --------->DEAR3(1)                          --------->DEAR4(2)                          --------->RRTF1(1)                          --------->ERF1                          --------->RAP2.3(1)                          --------->ORA47(2)                          <---------RAP2.6(2)                          --------->DEAR3(2)                          --------->RAP2.6(1)                          --------->ATERF1(1)                          <---------ABI4(2)                          <------NtERF2                         ------>NtERF2                         --------->ATERF1(1)                         <---------ATERF1(1)                        <---------PCF5                        --------->TCP16(1)                        <---------TCP16(1)                        <---------PCF2                        <---------RAP2.3(3)                        --------->TCP15(1)                        --------->TCP20                     --------->ALFIN1                   --------->ALFIN1                   <---------ANAC58                   <---------ANAC46                 <------MYB83<------NtERF2 --------->AHL20(1)                <---------DEAR3(1)         <---------AHL20(2)                <---------AtMYB61          --------->AHL20(2)                 --------->YAB1                --------->ALFIN1          --------->AHL20(2)    --------->AHL20(2)               <---------ABI4(1)          <---------AHL20(2)--------->ICU4   <---------ATHB12              <---------ANAC58     <---------ANAC46       --------->YAB1     --------->ICU4              <---------ANAC46--------->DEAR3(1)         --------->AHL20(2)  <---------YAB1              <---------ANAC58<---------ANAC46     <------ZmHOX2a(1)    --------->ANAC58    --------->YAB1 <---------ANAC58<---------ZAT6<---------TOE2(3)      --------->ANAC58 ------>ANAC55(2)<------MYB46(1)--------->ALFIN1 <---------TOE1(3)    ---------->DOF2      --------->At4g35610 -------ANAC55(2)<---------MYB46(3)----------->GT1----------->GT1---------->DOF2 <---------ICU4   atgtattcgtaatttggggtggtgtggggccgccgtggtgtaaattaaattaaggaaaaataaaaattaaagcaaagcaatgataatgtcattagctgta  6701500                <---------AHL20(2)                --------->AHL20(2)             --------->YAB1              <----------DOF2            ----------->GT1          <-----------GT1                <---------YAB1           <---------WOX13(1)   <---------ANAC46           <---------TOE2(3)          >>>>>>>>>GATA-1       <---------ANAC55(1)       ---------->DOF2                   <--------          >>>>>>>>>GATA-2       <---------ANAC58         <---------AHL20(2)        <-----------GT1          >>>>>>>>>GATA-3       <---------ANAC58         --------->AHL20(2)  <---------TOE2(2)          >>>>>>>>>GATA-4       --------->ANAC55(2)  <---------AHL20(2)      <---------TOE1(2)    <--       --------->ALFIN1         <---------ANAC55(2)  --------->AHL20(2)     ------>ZmHOX2a(1)     ---   ttttcaagggtggattgataaattgatcaccaatacgtgtttccttttttttttataaattaaagtttctattatttcctaggtataactatttaagaat  6701600                                         <---------------AtSPL8                                       ---------->DOF2                                    <---------AHL20(2)                                    --------->AHL20(2)              --------->ARR11(3)   <---------------AGL15              <---------ARR11(3)   --------->AHL20(2)                                               <            <---------YAB1         --------------->AGL15                                       <-----          <---------ICU4          <---------YAB1                                               ------         --------->ICU4       <----------DOF2                                                 -------      <---------YAB1       <---------AHL20(2)    --------->YAB1      --------->AHL20(1)       <------ -TOE2(3)<---------YAB1    <-----------GT1      <---------AHL20(2)   <---------AHL20(1)     --------- -------AHL20(2)        <---------AHL20(2)----------->GT1           <---------CCA1(2)  <---------GLK1(2) ------>AHL20(2)      <---------AHL20(2) --------->DAG2  <------NtERF2<---------AHL20(2)--------->GLK1(2)   ataaatttttgattattatcttatattattttctttattaaaaaaggtaaataataggtggcattagcttatatatttttctaatgacagaatctcataa  6701700                                         --------->ANAC58                                    <---------------AtSPL3                               <---------YAB1                                          --------->AHL20(2)                        <---------AHL20(2)                                          <---------AHL20(2)                        --------->AHL20(2)                                         <---------AHL20(2)                        --------->AHL20(1)                                         <---------ARR11(3)                        <---------AHL20(1)                                         --------->AHL20(2)                        <---------ARR11(3)                                         <---------AHL20(1)                        --------->ARR11(3)                                         --------->ARR11(3)                     --------->AHL20(2)  <---------ANAC55(2)                 ----------->GT1                     <---------AHL20(2)  --------->ANAC55(2)                 --------->YAB1         - -----------GT1    --------->AHL20(2)    --------->ANAC58                   <---------YAB1        --- ----ICU4          <---------AHL20(2)   <-------TEIL     --------->AHL20(1) <---------TOE2(3)     <-- --->ATHB51     --------->AHL20(1)  <---------------AtSPL8            --------->AHL20(2)        ----- -->ICU4        <---------ARR11(3)  <---------ICU4    --------->AHL20(2) <---------AHL20(2)   <------ ---YAB1   ----------->GT1   --------->YAB1    ----------->GT1        <---------AHL20(2)<---------AHL20(2) >YAB1  --------->STY1(1)<---------AHL20(2)  ---------->DOF2    ----------->GT1    --------->AHL20(1)   tttcacatacctagggtatatattaatatatttataaataagtacgtaaaagtaaaaaatatactatagttataaattatcgtaatatatttaatacgcg  6701800  Previous    Next  AGI:  At5g19820.1    Description:  EMB2734 (EMBRYO DEFECTIVE 2734); lyase. similar to importin beta-2 subunit family protein [Arabidopsis thaliana] (TAIR:AT4G27640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23467.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22080.1); similar to putative RNA binding protein [Medicago truncatula] (GB:ABK28849.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 6695226    to: 6701313    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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