Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                         <---------DEAR3(2)                                                                                         <------MYB46(1)                                                                                        --------->MYB46(2)                                                                                        -------------                                                                                        --------->MYB111(1)                                                                                        --------->MYB59                                                                                        <---------MYB46(3)                                                                                        -------------                                                                                       <---------ORA47(1)      <-------GAMYB                      <---------ZAT2                          ------->TEIL     ---     <---------MYB46(3)               <------ZmHOX2a(1)                          --------->GLK1(2)---    <---------AtMYB61               <---------TOE2(3)                            <---------ARR14(2)    <---------YAB1            --------->ANAC58                          <---------WRKY18(1) <-------TEIL --------At4g35610        ------>NtERF2  --------->At4g35610           ----------->HVH21<---------DEAR3(1) ------>GLK1(2)          <---------PCF5  <---------At4g35610           <---------ATHB12<--------P<--- ------GLK1(2)           --------->PCF2  --------->ZAT2        <--------P        --------->ARR14(2) >MYB52(1)     --------->LBD16--------->ANAC58 <---------GLK1(1)       --------->MYB46(3)<------MYB83   aatctgatggttgaatccagagacaaggggccacgaataaggaagctggagaccctcggtttctggttgcccaatgaccgatgaatctggtcggtacaca  6689600                                   --------->MYB55(2)                                   <---------MYB46(3)                                  <---------AtMYB61                               --------->ALFIN1                             <---------MYB46(3)                            --------->ALFIN1                            <---------AtMYB61                            <---------DEAR3(1)                          <---------MYB46(3)                         <---------DEAR3(1)                         <---------AtMYB61                      <---------ZAT6<-------GAMYB         --------->SPL7<---------MYB46(3)                                              <---------DOF5.7(2) -ZAT18 --------->ALFIN1 --------->ALFIN1                                              ---------->DOF2 -->AtSPL8            --------->ALFIN1<---------MYB46(3)                             <---------MYB52(1) -->AtSPL3            <---------AtMYB61 <---------AtMYB61                <---------REM1(1) ------>ATHB51  --------->ALFIN1<---------MYB46(3)                      <---------TOE2(3) ------>ATHB12<---------ANAC58 <---------DEAR3(1)               <---------REM1(1)    --------->DOF5.7(2) ------YAB1   <---------ANAC58 <---------AtMYB61      --------->At4g35610<-----------RAV1(1)   ------   ttattgagcggtatggccgtggtagtggtggtggtggtggttgtggtgagactagtagcagtcgagatgtagttgatgttgcaatccgttaaagaagaaa  6689700                                                                     --------->ARR11(3)                     <---------ZAT2                                  <---------ARR11(3)                     <---------At4g35610                            --------->YAB1                     --------->At4g35610                         ---------->DOF2                    <-----------RAV1(1)                      =================================HOX2a_HOX2a                   <---------RAP2.6(2)                       ------>ZmHOX2a(2)                  <---------At4g35610                      <---------ARR11(3)              <---------REM1(1)                      <---------GLK1(1)                         <-----              <---------MYB46(3)                     --------->GLK1(1)                 <------ZmHOX2a(1)        <---------MYB46(3)                          --------->ARR11(3)               --------->MYB59     <-----------RAV1(1)                            <---------ARR11(3)           <---------MYB46(3) --->GLK1(2)  <-----------RAV1(1)   <---------At4g35610    --------->ARR11(3)  <-------GAMYB   <-----   ctggtttgtgttgttgttgttgctgctgcttcatgctctgcttctggtgaagaagatttctgatcttcaaagatagttgtgagttgttaggaaaatggtt  6689800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                         --------->bZIP60(2)                                                       <-                         <---------O2                                                             ---                         --------->TGA1a                                                         ----                         <---------TGA1a                                                         <---                         --------->O2   --------->At4g35610                                   -------                         --------->ANAC58                                                    <-------                         --------->ANAC55(1)      <---------TOE2(2)                        ----------                         --------->ANAC55(2)      <---------TOE1(2)                     --------->ANAC46                         <---------ANAC55(2)    <---------SPL7                     --------->ARR14(2)                         --------->ANAC46  <-------TEIL                            <---------ARR14(2)          <---------ANAC58              <---------At4g35610                      --------->HSFB2a(1)-          <---------ANAC58             ------->TEIL                   <---------LBD16 <---------ANAC58          <---------ANAC46          --------->AtLEC2                  <---------At4g35610  <---------ALFIN1 ----ANAC58              --------->ANAC58 <----------DOF2 <---------At4g35610    <---------HSFB2a(1)- ----ANAC58              ============================bZIP_DOF      <---------At4g35610<---------ANAC58   tgcgaaattggtgcgagtattggagccacgtaagagacatgcagcttcatcgtaggctcgagcggcttcttctgcggtttcaaaggttccgagccacatc  6689900         <---------ZAT14      <---------ANAC46   <----------DOF2 ---------ARR14(2) ---------ARR11(3) ---------ARR11(1) --------CCA1(2)               --------->ANAC58 --------ARR14(1)              --------->ANAC58 ------>LBD16                 ------>NtERF2 ----->ANAC55(2)             <---------ALFIN1 ------ANAC55(2)       =========================HOX2a_HOX2a                        <----------DOF2 -->ARR14(2)           ------>ZmHOX2a(2)                                         <---------ANAC58 --ALFIN1--------->ZAT14   ------>NtERF2              <---------MYB46(2)      ---------->ID1 ->RAV1(1)            <---------GLK1(1)          <----------DOF2    --------->TOE2(3)           ----- ------>TEIL     <----------DOF2         ------>ZmHOX2a(1)    ----------->RAV1(1)<---------ANAC58 -------->ARR14(2)   --------->ARR11(3)<---------LBD16<---------MYB59       <-----------RAV1(1)------   cgtatcttttgtgtagtgtctttgatctctgccacccattttcctgaaggcctttgcctaactcccacaaacttagtcttgttgcctttgctcttctcct  6690000                                                                                       <---------ANAC55(2)                                                                                      <-------TEIL                                          *TSS--------->GLK1(2)                   ----------->GT1        <----------DOF2                  <---------AtLEC2                  --------->AHL20(2) ->ZmHOX2a(1)                     <---------AHL20(2)                       <-----------TBP      <---- --->TOE2(3)          --------------->AtSPL8  ------->TEIL               <-----------TBP  --------->AHL20(2)   tagttttctgctttggagttgtttgatgttccatattttttttgtatgaatctgtacatagacatagttataggcatatatatagggatacataaatttt  6690100                                                                                              -------                                                                                              -------                                                                                             --------                                                                                          <---------ANAC46                                                                                          <---------ANAC55(2)                                                                                        --------->MYB52(1)                                                                                   <---------ANAC55(2)                             ----------------------->TaNAC69(2)                   <---------LBD16                          <-----------ARR10                                      --------->CCA1(2)                         <---------CCA1(2)                                      --------->ARR11(1) --                     <-----------HVH21                                        <---------YAB1 <-------               --------->ATHB12                                             --------->YAB1<---------TOE2(3)              <---------YAB1--------->TOE2(3)                              <---------ZAT6 --------->ANAC55(2)             <---------TOE1(2)                <----------DOF2          <---------AHL20(2)<---------LBD16 -------GT1  <---------TOE2(2)    <---------MYB46(3)                 <---------YAB1--------->ANAC55(2)   tccattttgtgctcgtatgtttgggtcaaatcttagtggttgtctcgtctttctgaaaacttgttcttgttattttagtgatgatacggattacggatat  6690200         <---------ICU4         --------->ATHB12         -------->HAHB4                                                         ----------->RAV1(1)        --------->ICU4                                                        <---------ZAT18        <---------YAB1                                                        --------->ZAT18        <---------ATHB51                                                    --------->ZAT14      --------->YAB1                                                        --------->ZAT18      <---------ICU4                                                        <---------ZAT18     <---------YAB1                                                 <---------AHL20(2)     <---------AHL20(2)                                             --------->ATHB12  <---------AHL20(2)                                               --------->ICU4 --------->AHL20(2)                                                --------->AHL20(2) -->CCA1(2)                                                        <---------AHL20(2) -->GLK1(1)           <---------ZAT18                       <---------ANAC46<---------ZAT14 ->ARR14(2)          <---------ANAC58                   <---------PCF2   <---------ANAC58 ----->TEIL          <---------ANAC58--------->WOX13(1)<---------DEAR3(2)<---------ANAC46 --ARR14(2)     <----------DOF2   --------->GLK1(2)<-----------RAV1(1)   <---------ANAC58<---------YAB1   gaattttataattatgggcttttgggtactcttgagaatcattcagaggttttatgtgggttccatgtattaattgagtgcgcaccattttctgattttc  6690300                                                                             ------->GAMYB                                                                            --------->MYB46(3)                                                                            <---------MYB52(2)                                                                            <---------MYB55(2)                                                                            <---------MYB111(2)                                                                        --------->MYB46(3)                                                                        <---------MYB59                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                        <---------GLK1(1) ------>MYB83             <-                                                       <---------ARR14(2) ------>MYB46(1)          <-                                                 <---------ZAT2--------->ARR14(2)                  <-           <---------ARR11(3)                    --------->At4g35610   --------->ANAC46            <-           --------->ARR11(3)                    --------->ZAT2<---------ARR14(2)                  <-     <---------AHL20(2)           <---------ANAC46     --------->ARR14(2) ----------->RAV1(1)      -- <---------ZAT6              --------->YAB1      <---------At4g35610 <-----------GT1 <---------AHL20(2)   ttagtattaaaaagatttgtacagaagacaaatatgatgtgtttatttctcagcttggaactgcgaatattttacccaacaaactatattttttaagact  6690400                                                                  ------------>CBF                                  --------->YAB1             --------->At4g35610            <--------          --------->ICU4       --------->YAB1      <---------AHL20(2)          ----------->TBP         <---------TOE2(3)     <---------ICU4      --------->AHL20(2)        --------->TOE2(3)     -- --------ANAC58               <---------ATHB51<---------CCA1(1) ------>NtERF2<----------DOF2------>ZmHOX2a(2) --------ANAC58               <---------ATHB12<---------RVE1(1) --------->ORA47(1)        <---------ARR11(3) --------ANAC46               --------->ICU4 <---------ARR11(3)--------->RAP2.6(2)        --------->ARR11(3) --------ANAC55(2)        <------NtERF2      --------->ARR11(3)--------->DEAR3(1)        --------->YAB1 --------ANAC55(1)        ------------>CBF   <---------GLK1(2)--------->DEAR3(2)        <---------ATHB12 ------->ANAC55(2)    <---------ATERF1(1)   <---------RVE1(1)<---------At4g35610    ------------>CBF   tacgtatgcttaatgtttagagggaggcctcaataatgagaagaagagattttttaaatgctaagccgaccaatttatactttaaaaacaatgatcttga  6690500  Previous    Next  AGI:  At5g19790.1    Description:  RAP2.11 (related to AP2 11); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor RELATED TO APETALA2 11 (RAP2-11) [Arabidopsis Thaliana] (GB:Q6J9S1;GB:O23112); similar to CRF1 (CYTOKININ RESPONSE FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G11140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22081.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 6689110    to: 6690042    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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