Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->AHL20(2)                                                 --------->ANAC58           ----------->GT1                                      <---------YAB1                  ------>ZmHOX2a(2)           ---                                --------->YAB1   --------->ANAC58    <------ZmHOX2a(2)           <---                                --------->AHL20(2)                   --------->CCA1(2)           <---                               <---------ATHB12  --------->ANAC46   --------->ARR11(3)          -----                          --------->ANAC58       <----------ID1     --------->ARR14(2)          <----                          --------->ANAC46   --------->YAB1         --------->AGP1--------->ARR11(3) --------->ANAC58         --------->ANAC58  <---------YAB1          <---------ARR11(3)          <---- --------->ANAC46        --------->LBD16   <---------AHL20(2)       <---------ARR14(2)          <---- --------->ANAC58       <---------ANAC58   --------->AHL20(2)       <---------AGP1<---------ARR11(3)- ------->ZAT6           <---------ANAC46  --------->YAB1           <---------CCA1(2)           <----- >RAV1(1)               <---------ANAC58 <---------YAB1           ----------->ARR10         <--------   cacactcaaacgagtctgactatgttccgagcaatgaaatttgattataataagccaaaacaaaaactcagatctgagagataaaatctacagactcgga  6681600                          <------MYB83                         <---------TOE2(2)                         <---------TOE1(2)                      <---------ANAC46              --------->ICU4 --->ZmHOX2a(2)       <---------ANAC58             --------->ANAC58 ---ZmHOX2a(2)        <---------ANAC58             --------->ANAC58 ------At4g35610   --------->GLK1(1)           --------->ANAC58 ---->ARR14(2)    --------->ARR14(2)           --------->ANAC58 -----ARR14(2)    <---------ARR14(2)           --------->ANAC46 -------ARR10  <---------ANAC55(2)            --------->WOX13(1) -----AGP1     --------->ANAC55(2)    --------->ANAC58                                              < -------->At4g35610<---------GLK1(1)  --------->ANAC58            --------->MYB52(1)    ----------->GT1 ----CCA1(2)  <---------LBD16         --------->ANAC46  ----------->GT1--------->ZAT2  <---------MYB46(3) -LBD16----------->RAV1(1)<------MYB46(1)   <---------ATHB12  --------->ZAT6        --------->CCA1(2)   tctgatgaacaacatttacggatttcgtaggtatcaataccagcaaatcaagcaagaattgttaatactaacgagcttagacatagagatgggtgataca  6681700                                                                                        <---------TOE2(3)                                                                                       >>>>>>>>>WRKY18                                                                                      ----------->HVH21                                                                                      --------->WRKY12                                                                                 ------>NtERF2                                          ------>ZmHOX2a(2)                     --------->DREB2C(2)                                        <---------ARR14(2)                      --------->DEAR3(1)          --------->LBD16               --------->ARR14(2)                     --------->ATERF1(1)         --------->TOE2(3)            <---------ETT(2)        <---------ANAC46 --------->ERF1         --------->ANAC46        --------->YAB1               <---------ANAC58 <------NtERF2      ------->TEIL               <---------ICU4               <---------ANAC58 --------->DEAR4(2)      <---------ARR14(2)        <---------ATHB12     --------->ANAC46          --------->ORA47(2)      --------->ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              --------->DEAR3(2)     <---------CCA1(2)     --------->TOE1(3)         --------->ANAC58          --------->MYB46(3)  <-------MYC3             --------->TOE2(3)         --------->ANAC58          --------->RAP2.3(1)  ------->MYC3           <---------ARR11(3) --------->At4g35610               <---------ATERF1(1) <---------ANAC46  ----------->HVH21  --------->ETT(2)       <-----------------------TaNAC69(2)   <-- -----------------------TaNAC69(2)   --------->DDF1--------->MYB52(1)       <---------ABI4(2)    <---   gaaacgtgtatccgtaaacatttgacagaccttaatcatgtcgatcggctggataacgcaagtagcgagcataccagaggcaccgccattgacgaagggc  6681800                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                    --------->SPL1(2)                                                                    --------->SPL7                                                                   --------->SPL1(1)                                                                   <---------SPL1(1)                                                   <----------DOF2<---------SPL7                                       ------>NtERF2             <---------ANAC58                                       --------->LBD16           <---------ANAC58  -------->P --------->ANAC58                     --------->ANAC58          --------------->AtSPL3 --------->ANAC58         <----------DOF2<---------ALFIN1       <---------------AtSPL8 --------->ANAC46       <---------At4g35610<---------CCA1(2)    <---------------AtSPL3 -------REM1(2)    <---------WOX13(1) --------->ANAC58         <------------------SPL14          ---- -------DOF2     --------->ATHB12     --------->ANAC46  <----------DOF2        --------->ANAC46 <----   ttcacggtagtccagacactgattggagctttcttctcttccgccatctctctcttttcttttgttttcgtacggactcaaacgcaaccagaagaagaga  6681900                                                                                                   --                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                             ------>MYB83                                                                                             ------>MYB46(1)                                                                                             --------        <------NtERF2                                                                        --------       --------->LBD16                                                                     --------->DEAR3(1)     --------->LBD16                                                                       <---------ALFIN1     <---------LBD16                                                                       --------->AtMYB61     --------->At4g35610                                                                --------->ANAC46     <---------At4g35610                                                                --------->ZAT6    <---------ANAC46                                                                    <-----------GT1   <---------LBD16                                        <---------ANAC46            <-----------GT1 ----->GLK1(2)           ---------->DOF2    <---------ANAC46--------->ALFIN1     <XXXXXXXXXXXXXXXXXXX -----GLK1(2)---------->DOF2     <-------TEIL   <------ZmHOX2a(1)            <----------DOF2 --------   ttccttccgcggagaaaaagagagagagaaagagattcacttggtggagaggagacgatgaagtgtgaagcttatgggccttttatattaacaccaccca  6682000                                                                        --------->ANAC46                                                                        --------->ANAC58                 ------>MYB83                                           --------->ANAC58   *TSS        <---------MYB55(2)                                    ------>ZmHOX2a(2) ----->GAMYB   --------->AtMYB61                                   <-----------ARR10 ----->At4g35610 ------>MYB46(1)                                ------>ZmHOX2a(2) ->MYB83       <---------MYB111(2)                             --------->CCA1(2) ->MYB46(1)    --------->MYB46(3)                              <---------At4g35610                <-- ---->MYB52(1) <---------MYB52(2)                              <------ZmHOX2a(2)                 ---- ---MYB55(2)   <---------MYB111(1)    <---------AHL20(2)      <---------AGP1                     <--- -->MYB46(3)   <---------MYB46(2)    <---------YAB1           --------->AGP1                 -------- ---MYB111(2) --------->ANAC46     <---------ICU4             <---------ARR14(2)             <------- ->ANAC58     --------->ANAC58 <---------AHL20(2)             --------->ARR11(3)             -------- ->ANAC46     --------->ANAC58 --------->AHL20(2)             <---------ARR11(3)             <------- XMIR823<------------CBF   <----------DOF2   <-----------GT1  --------->ARR14(2)        <------------ ->ANAC58  --------->ZAT18<---------DAG2  <---------AHL20(2) <---------GLK1(1)          -------------   actgaaactaaattgcaccaaacccttgcctttttaatttttatttttttccatttgcatatgagatctgatctaagccagacatattttctaaatttat  6682100                                                                    --------->YAB1       <----------DOF2                                        <---------ANAC55(2) -------AHL20(2)                           --------->AHL20(2) --------->ANAC55(2) ----->AHL20(2)                 --------->ANAC58              --------->ANAC58 ------AHL20(2)                 <---------ANAC55(2)           --------->ANAC58 ->AHL20(1)                     --------->ANAC58            <-----------GT1 --AHL20(1)                     --------->ANAC46         <---------AHL20(2) ->AHL20(2)     <-----------GT1 --------->ANAC55(2)      <---------ICU4 --AHL20(2) <----------DOF2   <-----------GT1           --------->AHL20(2) ---AGL15   <---------DAG2<---------ARR14(2)            <---------AHL20(2) ------->TEIL -->AGL15<-----------GT1  --------->ARR14(2)      <---------ZAT6   <-------TEIL            <-------TEIL   taatttggactttacttttcaccattcggattttacgcaatccaaatatttagagttatttattacgcattcatatgaattttagatttgacattcgtcc  6682200                                                                                     ------>ZmHOX2a(2)                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                          --------->AHL20(2)       <---------ARR11(3)                                                          <---------AHL20(2) <---------AHL20(2)                                                          <---------AHL20(1) --------->AHL20(1)                                                          --------->AHL20(1) --------->AHL20(2)                              <---------MYB52(1)         --------->AHL20(2) <---------AHL20(2)                     ----------->GT1        <---------AHL20(2)  <---------YAB1     --------->ARR11(3)          --------->HSFB2a(2)--------->TOE2(3)           <---------ATHB12   --------->AHL20(2)   atttctaattttctagtatgaagttgaaaatcgttagtattctgaattttttgggtccaataaattctaattttttaaaaaaattgatcttctgtatttg  6682300                  <---------YAB1                <--------ATHB1                <---------ICU4                --------->YAB1<-----------GT1                --------->ATHB51     <---------ANAC46                                            ----                <---------AHL20(1)--------->ANAC58                                           <-------                --------->AHL20(2)--------->ANAC58         --------->ALFIN1                  --------               <---------ATHB51   --------->ANAC46  --------->ZAT18                         <--------               <---------ATHB12 <-----------GT1     <---------ZAT18                   <---------YAB1<   tattttgtatttgttcaataatttttggcatttttcacgccgtattttagatagtggaccagtggagcagtatttctgatgcaatttgataattctgatg  6682400                           <---------TOE2(3)                           <---------YAB1                      <---------MYB46(3)           <------ZmHOX2a(2)                                     --------->ANAC58          --------->ARR11(3)                                     --------->ANAC58 ------------->AGL1   --------->MYB52(2)                      <---------ARR14(2)  --------->ANAC46 <- --At4g35610        <---------ANAC46  ------->TEIL        --------->At4g35610  --------->ARR14(2)  -- ->At4g35610    ------->MYC3    --------->MYB52(2)   <--------HAHB4     ---------->DOF2           --- -YAB1    <---------ARR11(3) --------->TOE2(3)      <---------YAB1   ----------->RAV1(1)        <---- ----------DOF2 <-------MYC3--------->ZAT6  <---------YAB1<---------At4g35610  <---------ARR14(2) ---   cccttttgtgaagatcaacgtggtttgttaacattagttgaatctcataaatgtattattagctgatacgacaacaaagcatatacagaacgttgataaa  6682500  Previous    Next  AGI:  At5g19760.1    Description:  dicarboxylate/tricarboxylate carrier (DTC). similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G22500.1); similar to oxoglutarate malate translocator [Solanum tuberosum] (GB:CAA68164.1); similar to dicarboxylate/tricarboxylate carrier [Nicotiana tabacum] (GB:CAC84547.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 6679308    to: 6682003    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g19770.1    Description:  TUA3 (tubulin alpha-3). Identical to Tubulin alpha-3/alpha-5 chain (TUBA5) [Arabidopsis Thaliana] (GB:P20363); similar to TUA2 (tubulin alpha-2 chain) [Arabidopsis thaliana] (TAIR:AT1G50010.1); similar to TUA5 (tubulin alpha-5) [Arabidopsis thaliana] (TAIR:AT5G19780.1); similar to TUA4 (tubulin alpha-4 chain) [Arabidopsis thaliana] (TAIR:AT1G04820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22082.1); similar to alpha tubulin-1D [Triticum aestivum] (GB:ABD92942.1); similar to tubulin A [Glycine max] (GB:AAX86047.1); contains InterPro domain Alpha tubulin; (InterPro:IPR002452); contains InterPro domain Tubulin/FtsZ, GTPase; ( Range:  from: 6682495    to: 6684581    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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