Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------AHL20(2)                                                          <---------YAB1                                                         <---------AHL20(2)                                                       <---------YAB1                                                     <---------AHL20(2)                                                 <----------DOF2                            ----------->GT1   --------->AHL20(1)                    ----------------->AGL2    <---------ARR11(3)         --------->ANAC58  --------->DAG2     <---------AHL20(1)           <---------ANAC58         --------->ANAC58 ---------->DOF2     --------->ARR11(3)           <---------ANAC58 ----------->GT1    ----------------->AGL3   --------->CCA1(1)           <-----------GT1 ------>DOF2   ---------->DOF2               --------->RVE1(1)  <-----------GT1   aaagtgtcaaaacgcatgaaagtccaaaaaaagttatatatatccaaatatctttttatttttattttactatattttcgttctaacttagtttttgctc  6670100                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                              <---------WOX13(1)                                                                           <---------YAB1                                                                         --------->O2                                                                         --------->ANAC55(2)                                                                         <---------O2                                                                         <---------ANAC55(2)                                        <---------AHL20(2)               <---------ANAC46                           <---------------AGL15                         ----------->GT1                ------>ZmHOX2a(1)      --------->AHL20(2)         <---------ANAC58     <---------ALFIN1      --------------->AGL15                  <---------ANAC58     <----------DOF2   atgttcaacacctctctcctatttgatgactaaatagagcataaaattgaattcacatatggtataagtcgtgtctcgtgattaattagcttttgtttct  6670200                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                              <----------DOF2   <---------DEAR3(2)                                        <---------ANAC58        <---------MYB46(3)                                        <------MYB83            <------MYB83                                        <---------ANAC58        <------MYB46(1)                                       <------MYB83             --------->MYB52(2)                                     <--------P                <---------AtMYB61                                     <<<<<<<<<MYB98            --------->MYB111(1)                                    <---------ANAC58          <--------P ---------->ID1                                    <---------ANAC58         <---------ANAC58                       --------->AtMYB61<------MYB46(1)      <-------GAMYB                       <---------ALFIN1<------MYB46(1)       <---------ANAC58                  --------->ANAC58  <-------GAMYB            <---------ANAC46           --------->ANAC58         <---------ANAC46        <---------MYB46(3) <---------YAB1           --------->ANAC58    <-----------RAV1(1) <----------DOF2  --------->MYB52(2) --------->ZAT14  --------->ANAC58 <---------MYB46(3)   <-----------RAV1(1)<----------DOF2   cagtgtaataaacaagaaataagcaccacatcaatgtgggttgggtttcttttcttttttgtgggttggttccttgtctttatatttggcatttagctag  6670300                                   ----------->HVH21                                  <-----------HVH21                                  --------->LBD16                                 --------->O2                                 ==================================bZIP_DOF                                 <---------TGA1a                                 --------->bZIP60(2)                                 <---------O2                                 --------->TGA1a                                <------NtERF2                            ------->GAMYB                            ===============MYC_MYB                            --------->DEAR3(1)                           <------------AtMYB77                  ------>MYB46(1)                           ================MYC_MYB               ------>MYB83                       -                           --------->MYB46(3)                  <---------MYB46(2)                   <                           --------->DEAR3(2)                  <---------MYB59                     --                         <---------ARR14(2)                   --------->ANAC55(2)               -----                         --------->ARR14(2)                   --------->ANAC46            --------->ANAC46          <---------ANAC46 --------->ATERF1(1)              <-----------GT1               <<<<<<<<<TAC1  <---------YAB1         --------->TCP20                <----------DOF2      ---------->DOF2---------   gcttctcattctacgtggatgtgagtggaaccgccccgtgacctcttcccttctgtctcttttcacctaattcccttaccaaagtgccaaacactcgacc  6670400                                                                            <---------SPL7                          <-----------TBP                                 --------------->AtSPL3                          <---------AHL20(2)                              --------------->AtSPL8 <---------MYB52(2)       --------->AHL20(2)                   <---------AHL20(2) -------->At4g35610     <-----------TBP                       <---------ARR11(3) ---------At4g35610   --------->AHL20(2)                      <---------AHL20(1)<----------DOF2 ----->TEIL           <---------AHL20(2)        --------->ARR14(2)     <---------AtMYB61<----------DOF2 ---->RAP2.6(2) <---------ALFIN1                <---------ARR14(2) <---------AHL20(2)------->TEIL---- -->HVH21     <---------ALFIN1       <-------TEIL           *TSS <---------AHL20(2) <---------CCA1(2)   gcatctaacaacatccacacacatttatatatatacacatacatattgagaattcacatagccatatatttttttggtcgtactttgtatctttggcaaa  6670500                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                    <---------ZAT2                                                     <---------ANAC58               --------->ZAT2                                                     <---------ANAC46              --------->ANAC58                         ------>ZmHOX2a(1)    <---------YAB1                       --------->ANAC58 -------------------->ANAC81  <---------AHL20(2)     <---------ANAC58           ------->GAMYB<-------   acacaaaaaacaaaaacaaaaaaactccttatatttttgtatttgatgctaattgtcgtatagatgcccaaactcaattcaacccaagctcccaatttat  6670600                                                       <---------GLK1(1)                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                 --------->AtMYB61                                                --------->ANAC58                               ------->GAMYB    --------->ANAC58                              --------->ANAC58--------->REM1(1)      ------>ZmHOX2a(1)    <---------WRKY12   --------->ANAC46 -------GT1                <---------WRKY38(1)--------->ANAC58 --AHL20(1)          <----------DOF2        ----------->RAV1(1)        --------->ANAC58 ->AHL20(2)       ------>ZmHOX2a(1) --------->YAB1---------->DOF2      --------->ANAC58 ->AHL20(1)    <---------YAB1 --------->ANAC46<---------ALFIN1         --------->ANAC46      -------- --AHL20(2) <---------MYB52(1)--------->ANAC58--------->ANAC58   <----------ID1     --------->GLK1(2)   tccttctccttctcgttatccttctttgttcaacgcaaacacaatgccacaccaaaggtctccgattacgaccaagaaaccagaagaatatgaacacgac  6670700                  --------->LBD16                         --------->TOE1(3)                 --------->ANAC58                         --------->TOE2(3)                 --------->ANAC46               --------->ATHB12                  --------->At4g35610                <---------LBD16                 <---------MYB46(3)                <---------At4g35610    ------>ZmHOX2a(2)                          <-------TEIL                       <------NtERF2   <---------At4g35610--------->At4g35610     --------->ARR14(1)             --------->ANAC46   --------->At4g35610<---------At4g35610     --------->GLK1(2)              --------->ANAC58 --------->ATHB12--------->ANAC58            <---------GLK1(2)               --------->ANAC58 ->ANAC46 --------->ANAC46   <-------TEIL  ----------->ARR10           <---------ZAT6             xxx   gagtgatcggacacaaaacccggaagatgagttcatgaaatgggtgagattcgttggaagccttaaacactcagtgttcaaggcagccaagaacaaactc  6670800                         --------->ANAC58     --------->ZAT18                         --------->ANAC46   <---------bZIP60(1)                         --------->ANAC58   --------->bZIP60(1)       <---------GLK1(2)                    <---------ETT(2)  <---------TOE2(3)             <---------ATHB12                    <---------ZAT18 ---------->DOF2            ------>NtERF2                 ------->GAMYB  <---------------AGL15         --------->ANAC46               <---------At5g28300 <---------ATHB12           --------->RAP2.6(2)               <----              <-----------GT1  ----------------->AGL3      --------->ANAC46                     <----           --------->TOE2(3)<---------GLK1(1) --------->ZAT14 --------->ANAC58            ----------- xxxxxxxxxxxxx>smallRNA(i)  --------->GLK1(1) <---------ZAT14 --------->ANAC58            <----------DOF2   ttcccttcttatacattaactgtccacaagaaatccaataaaggtgacttcactaaaatccaagacgccattgattctctccctctcatcaactttgttc  6670900        ---------->DOF2      <---------YAB1  <-----------TGA1 <---------bZIP60(1) --------->bZIP60(1)          --------->ANAC58                               --------->MYB52(1) --------->TGA2(1)            --------->ANAC46                           <---------ICU4            -- <---------ANAC46    <------NtERF2--------->ANAC58                    --------->ANAC55(2)        <--- <---------TGA2(1)  --------->LBD16     --------->ANAC58            <-----------GT1              ---- -----ANAC58       <---------ANAC46     --------->ANAC58        <---------YAB1           ------>ZmHOX2a(2) -----ANAC58 <-------TEIL     --------->ANAC58 <----------DOF2 <---------AHL20(1)--------->At4g35610 ---------->WRI1  <---------LBD16 --------->ANAC58          --------->TOE2(3)<-----------GT1     ----   gtgtcgtcatcaaagttcatgccggagtttacaagtaagcacaagtactctttcttccattacattatttttacataattaacagctctgatctatatca  6671000  Previous    Next  AGI:  At5g19729.1    Description:  unknown protein Range:  from: 6670311    to: 6670424    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g19730.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63186.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65438.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 6670460    to: 6673284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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