Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ZAT14                                                            <---------At4g35610                    <-                                                            <---------ZAT14                        --                                                     <------ZmHOX2a(1)                             <-                --------->ANAC46                 ========================HOX2a_HOX2a               --           ---------->TaMYB80                    <------ZmHOX2a(2)                --------->MYB52(1)        ----------->GT1                         --------->ARR11(3)               <---------WRKY38(1)       <---------TOE1(2)                        --------->ARR14(2)               <---------WRKY12  <-       <---------TOE2(2)                        <---------ARR14(2)  --------->CCA1(2)             <--   --------->HSFB2a(2)                         --------->At4g35610 <---------ARR11(3)      --------->ARR11(3)   <---------HSFB2a(2) ----------->GT1      --------->At4g35610    --------->ARR14(2)      <---------ARR11(3) -----ANAC58 <---------ARR14(2)             <---------At4g35610    <---------ARR14(2)    ----------->ARR10 -----ANAC58<----------TaMYB80---------->DOF2 ----------->ARR10   <------ZmHOX2a(1) <---------ATHB12   ttgtgctcgaaggtatatacgaagagggtgaagaaaggaattggtgagcagatcaggaatagagcagaggatatatgtttgggccaacgatgagatactt  6661900                             <-----------RAV1(2)                            --------->LBD16                                                      ----                       ------>ZmHOX2a(2)                                                <-------GAMYB         ----------->GT1    <---------LBD16                                            --------->MYB52(2) ------>ZmHOX2a(2)   <---------ARR11(3)                                                <---------MYB46(3) --------ARR11(3)    <-----------ARR10                                                <-------TEIL ------->ARR11(3)    --------->ARR11(3)                      ------>MYB46(1)         <---------MYB52(1) --------ARR14(2)  <---------YAB1                            ------>MYB83    --------->DAG2     ----- ------->ARR14(2)--------->YAB1                            <---------MYB59   <---------------AtSPL3 --------AGP1    <---------ICU4                            <---------MYB46(2)<---------------AtSPL8-- -------CCA1(2) <---------ATHB12          ---------->DOF2--------->MYB52(1) ---------->DOF2    ------   ggatcttgatgaagataaatcatgatcttccccaggttgagccatagagcgacgattactaccgaacttgtgagtaagaaaagtacggttcgttgaagcg  6662000                                 <---------ANAC58                            ---------->DOF2                       --------->ATERF1(1)                       <------NtERF2                      <---------DEAR3(2)                      <---------RAP2.3(1)                      ------>NtERF2                      <---------ATERF1(1)                     <---------RAP2.3(2)                     <---------RAP2.3(3)                  ------>NtERF2                     <---------ATERF1(2)           <-------TEIL                     --------->ATERF1(2)         --------->TCP20                    --------->RAP2.6(3)         <------MYB83                <<<<<<<ZML2                    <---------LBD16  <---------ANAC58    <---------ANAC46<---------HSFB2a(2)       <------ZmHOX2a(1) ------>NtERF2          <------MYB46(1)    --------->ARR14(2) ----->DOF5.7(2)   <---------At4g35610         <---------MYB46(3)  <---------ARR11(3) ---->TOE2(3)      --------->At4g35610        --------->ALFIN1--------->ZAT18 -------->DOF2    ----------->HVH21  <---------ANAC58 --------->AtLEC2   --------->HSFB2a(2) ----->GT1   <---------AtMYB61   <---------ANAC58<---------PCF2    --------->ARR11(3)        <-------   ttaaagagaggagttttggtctgccggctccaaaggcttgcgaacagagtgggtccatgccgagtgcaagacctgctagaacggagtagccagtgatgtt  6662100                              --------->ZAT6                         --------->STY1(2)                         <---------STY1(2)                         --------->ZAT2                         --------->At4g35610       --------->LBD16                         <---------ZAT2           --------->LBD16                <---------ZAT14                       --------->MYB46(3)  <---------ARR14(2)            <------NtERF2                     ------>NtERF2         --------->ARR14(2)          <---------ANAC46                  <---------ATERF1(1)      <---------MYB52(1)          <---------DEAR3(1)                 --------->PCF2      --------->ZAT14                   <---------ANAC58          <---   --------->ANAC58--------->ATERF1(1)  <---------------------WRI1    <---------LBD16            ----   --------->ANAC58--------->MYB46(3)--------->ZAT18                --------->ALFIN1           <----- --YAB1     <-----------RAV1(2)      <---------ZAT14  <------ZmHOX2a(1)<---------ANAC58<------ZmHOX2a(1)   agcgaaggcaatggccagggagccaccagctagctctagttcaccgatatgcccgaggaagagcatcgagatggcggagcgagcgtagaggatgagggcc  6662200                                                                           --------->ATERF1(1)         <---------HSFB2a(2)                                               <------NtERF2         --------->HSFB2a(2)                                    <------NtERF2        <---------ANAC46                                       --------->HSFB2a(2)        --------->ETT(1)                                       <---------HSFB2a(2)        <---------LBD16                                       <---------ANAC46   <---------ARR14(2)                                         <---------LBD16   --------->ARR14(2)                            <---------At4g35610      ------>NtERF2  <------ZmHOX2a(1)                ------>MYB83  --------->At4g35610  --------->ALFIN1   <-----------GT1 ---NtERF2           <------ZmHOX2a(1)     <----------DOF2    --------->ETT(1)<------NtERF2       <-- -->NtERF2<------NtERF2            ------>MYB46(1)        <---------WOX13(1)<-----------RAV1(2)------ ----DEAR3(1)      <---------TOE2(3)    <---------ALFIN1--------->ATHB12 <---------RAP2.3(3) --------   gcgaggattgtcgggaaggctaaggagaagagagacctagcctcacttttaagctcagtgattgtcgggaaaatgggggcagggttttgtttttccaggt  6662300                              <---------YAB1                                                  -------                         <---------At4g35610                                                  <------                       <---------ANAC46                                                     ---------                      <---------At4g35610                                                  --------->ARR11(1)                  <---------ANAC58                                                         --------->ARR11(3)                  <---------ANAC58                                                         --------->ARR14(2)              --------->CCA1(2)                                                            <---------ARR14(2)             --------->ARR14(2)                                                            <---------ARR11(3)             <---------ARR11(3)                                                   ----------->GT1 -------CCA1(2)   <-----------RAV1(1)                          ---------->DOF2   <---------TOE1(3) --->AGP1    --------->ARR11(3)        --------->GLK1(1)      --------->AHL20(2) <---------YAB1 ->LBD16     <---------ARR14(2)--------->ATHB12   ---------->ID1                 <---------TOE2(3)   ctatcttcgatagaagatttgtgtggctgatgatgtttggggtttccattttgtctctgtgaaataaaagacacaagacgattatggttacaagatatga  6662400                                                  --------->O2                                                  <---------O2                                                  --------->TGA1a                                                  <---------TGA1a                                                  <---------bZIP60(1)                                                  --------->bZIP60(2)                             ---                                                  =========================================bZIP_DOF   <---------At4g35610                            --------->bZIP60(1)           ---------->DOF2  <---   --------->ZAT2                              <---------MYB52(1)             <---------YAB1   <-----   --------->At4g35610                         ----------->HVH21            --------->YAB1   <------- -->ICU4<---------ZAT14                       <-----------HVH21            <---------ATHB12 --------- ---YAB1--------->ZAT14   --------->ANAC46   --------->ANAC46       ----------->GT1         --------- >CCA1(2)           <-----------TBP<---------ANAC55(2)             <------ZmHOX2a(1)     --------->AHL20(2)   ttaccagcagaacacttctggtttatatacacaaattacctatatgtccgtcacgtcggacttagcgaaggagtcaaatgataaaagtcaaatatttatt  6662500  <------ZmHOX2a(1)             ----------->GT1 ------->DOF2                  --------->DAG2 ------AHL20(2)      --------->ICU4                          --------->HSFB2a(2) ----YAB1<----------DOF2       <---------TOE2(3)          <----------DOF2      --------->CCA1(2)  --- --AHL20(2)         <---------TOE2(3)                <----------DOF2   <---------ANAC46        ------ >ICU4   <---------DAG2      ---------->DOF2         <---------DAG2 --------->ALFIN1          ------- >AHL20(2)       <---------AHL20(2)         ---------->DOF2  <---------HSFB2a(2)        -------------   aaaaggatagactttatgttttaatgtttaaaaaaggttaattacagaaagaacacttttcttttagaaggtgctgtgaagataagacttcttaaaatgt  6662600                                                                         <---------YAB1                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                               <----------DOF2                                                            <---------ARR11(3) <---------ZAT6       --------->MYB59                                      <-----------GT1  ----------->GT1 ------->DOF2                                               --------->ARR11(3) ----------->GT1    <-- --->TOE2(3)                                          <---------GLK1(2) <---------AHL20(2)        --- ---->GT1                                           <---------TOE2(3)  --------->YAB1      <---------DAG2 -->AGL15              <----------DOF2 <---------REM1(2)  <---------YAB1--------->AHL20(2) <---------   taaagaagttaggcatttttgtaatcttttttttttgggtctacaaggttgttttagattattatctttttaattttaatagtgaaaaaatccctttttt  6662700                                                                                    ----------->GT1                                                                                   <---------HSFB2a(2)                                                                                --------->GLK1(2)            --------->AHL20(2)                                                 <---------GLK1(2)            <---------AHL20(2)                                                 <---------GLK1(1)          <----------DOF2                                                      --------->ARR14(2)          --------->TOE2(3)                                             <---------AHL20(2)       <---------ARR11(3)                                              <---------AHL20(2) --------->YAB1                          --------->YAB1                --------->AHL20(2) -------HSFB2a(2)                       <---------YAB1             --------->AHL20(2)       --------- ------>HSFB2a(2)                  <----------DOF2            <---------YAB1   <---------ARR14(2) -DOF2 --------->ARR11(3)  <-----------GT1       <---------MYB59   <---------AHL20(2)     --------->TOE2(3)   ctataagaacatctttaatttgtatgttttcacaatacttttatgaaaatgcctaattttagttctgattttattaaatgggattctggtaacattaatt  6662800  Previous    Next  AGI:  At5g19700.1    Description:  MATE efflux protein-related. similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G29140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65441.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 6660823    to: 6662349    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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