Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ----------->GT1                                                            <---------WOX13(1)                                                          --------->ATHB12                                                         <---------AHL20(2)                                                         <---------YAB1                                                        --------->AHL20(2)                                                        <---------AHL20(1)                                                        --------->AHL20(1)                                                        <---------AHL20(2)                                                       --------->YAB1 ---------ANAC58             <-----------GT1          <---------YAB1 ---------ANAC58         --------->YAB1              --------->AHL20(2) --------->ANAC55(2) -----ANAC58             <--------HAHB4             <---------AHL20(2)  <---------ANAC55(1)      ---- -----ANAC58            <---------YAB1              --------->AHL20(2)  <---------ANAC55(2)      <--- -----ANAC46            <---------AHL20(2)         --------->AHL20(2) <-----------GT1  <---------ICU4   ttgcttaagaagagccaaaactctctataattaacaagtctaaaattgacaaaattaatataattggttttgttacatgtttgtgaccataactactaaa  6622800                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                           ------->GAMYB                                                            --------->AHL20(2)            <---------MYB52(2)                                                       <---------ATHB12                   <---------MYB46(2)                                <---------MYB46(3)   --------->WOX13(1)                   <---------MYB55(2)                        <---------YAB1          ------>ZmHOX2a(2)  --------->ANAC58       --------->MYB46(3) ----->AHL20(2)       --------->YAB1          --------->ARR11(3)   --------->ANAC58 --------->GLK1(1) ------AHL20(2)      <---------ATHB12   --------->ALFIN1    <---------AHL20(2)  <------ZmHOX2a(1)   aaaattcacagaaaaactattcaataatccttgtttgttcatgtgtgtgatctattaatcaataaaatcaagaaaatggataggagaaatcaactaacgt  6622900                          <---------YAB1                     --------->AHL20(2)                     <---------AHL20(2)                    <---------AHL20(2)          <---------MYB46(3)                                 <-                 <---------AHL20(2)             --------->MYB46(2)                         <---------AHL20(2)                 --------->AHL20(2)          --------->TOE2(3)                            <---------AHL20(2)                --------->AHL20(2)         ------->TEIL      <---------At5g28300          --------->AHL20(2) --TOE1(3)--------->GLK1(2)                <---------TOE1(3)<-----------GT1         <-----------HVH21 --TOE2(3)<---------ARR11(3)   <-----------GT1<---------MYB52(1)                 <---------At5g28300 >MYB52(1)--------->ARR11(3) <---------WOX13(1) --------->MYB52(2)              <-----------GT1    --   ttttttctcaaaaatctatttatttattttgattaacatgttttgaacgttagttaactaatttaccctacaaaaaactaatttaccgtcaaataaatga  6623000                                                    --------->AHL20(1)                                             --------->ANAC46                                             --------->ANAC58                                             --------->ANAC58                                            ---------->ID1                                     ------                                          ----------->HVH21                                    ------                                      --------->AHL20(2)  <---------YAB1                       <-----           --------->YAB1         --------->AHL20(2)<---------AHL20(1)            <-----------GT1     <---------------AGL15       --------->AHL20(1) <---------AHL20(2)<---------ARR14(2)    ------>MYB83     --------------->AGL15       <---------AHL20(1) --------->AHL20(2)--------->GLK1(2)     ------>MYB46(1) --------GLK1(1)                 <---------ARR11(3)--------->AHL20(2) --------->ARR14(2)  <---------MYB59 ------->GLK1(1)     <---------YAB1   <---------AHL20(2) <-----------GT1  ----------->GT1 --------->TOE2(3)   gaaatccccttaatgagaaattgattattttccaaaatatttatttgacgcaattttattttcatttttgaaaatccagtaattttacaaaacctaataa  6623100                                     <---------AHL20(2)                                     --------->AHL20(1)    ---------->DOF2                  --------->AHL20(2) --------->ANAC46                   --------->AHL20(2) --->YAB1  --------->ICU4           <---------AHL20(2)                                        ------- --->AHL20(2)                     --------->YAB1                   <----------DOF2    <-----------GT1 ----AHL20(2)                   --------->AHL20(2)  <---------MYB46(3)            <----------DOF2   tatactcaaaggaatgtttacataaaacattcaaaaaaataatttgttttttgtttgttcgtaaatgggctttaacatcacctccttttcactctatcat  6623200                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                          <-----------GT1                    ------>ZmHOX2a(1)                                                         <---------AHL20(2)        ----------->HVH21       --------->LBD16                                <---------ARR11(3)         <---------ANAC58      *TSS                                        --------------------->WRI1     <---------ANAC58   < -->YAB1           --------->YAB1 <---------ARR11(3)  --------->ARR11(3)    <<<<<<<<<TBF1   ---------   cttctactccgagtctccgaatcaaaaaaaaccctagctcttattttttgttcttagattttatctcttaagctcttcttcttccttgacatttcctcaa  6623300                  <---------TOE2(3)       --------->LBD16                                               --------->ARR14(2)      --------->LBD16                                                --------->GLK1(2) -----------GT1  <-----------GT1    --------->YAB1                   <---------ARR14(2)         <---- >TOE2(3)   <---------YAB1  <-----------HVH21                    --------->YAB1        ---------->DOF2   tttcactcccgagtacgattaacaatgcattgtcacaacgatgatgttcgcttctcttcatcttctatcagaatccattctccatctcccaaagaacaac  6623400                                  --------->TOE1(2)                                  --------->TOE2(2)                       ------>ZmHOX2a(1)                   --------->ANAC55(1)            ------>MYB46(1)       --------->TOE2(3)   <---------ARR14(2)                          ---  --------->ZAT14   <---------ATHB12        <---------ALFIN1 <---------CCA1(2)                    --- <----------DOF2   <---------ARR14(2)  <---------CCA1(2)   --------->ANAC46 ------>MYB46(1)    <----- -----ALFIN1------>MYB83         <---------HSFB2a(1)  --------->ARR14(2)    ------>MYB83   ----------   actctttactcaccaatctccaatcctgctctaaaaccttcgtctctcacctctcaaatactcgtaactcactaaaccaaatgctccagtcgctaaagaa  6623500                         --------->MYB52(2)                        <-------TEIL                       <---------MYB52(1)                       --------->ARR14(2)                     <------MYB46(1)                     <------MYB83                    --------->MYB52(2)                 <-------MYC3                        --------------->AGL15                 ------->MYC2                    <---------GLK1(2)                 <-------MYC2                   --------->At4g35610     --------->ANAC46<---------DEAR3(2)         <---------At4g35610          <---------WOX13(1)   <---------ALFIN1<-------TEIL               <-----------RAV1(2)          --------->ATHB12 <---------ALFIN1------->MYC3              ------>MYB83              --------->ZAT2 ------>ANAC58<---------ALFIN1         <---------At5g28300           <---------ZAT2 ------>ANAC58--------------------->WRI1--------->DEAR3(2)           <---------At4g35610 ----GLK1(2)------>ZmHOX2a(1)         <-----------GT1<---------------AGL15<---------YAB1         <--- >DOF2   ------>ZmHOX2a(1)   <---------SPL7------>MYB46(1)  <---------ANAC55(2)                  <---   tcgccacactcctcctccacgttcggttcgtcgtcccaatttaccgactcagatgctcaattcagtaacccagcttatgattgggaagtcttctccaatt  6623600                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                            <---------ZAT2                                                                            --------->ZAT2                                                                     --------->WRKY12                                                                     --------->WRKY38(1)                                                                     <---------ZAT18                                                                     --------->ZAT14                                                                   --------->LBD16                                                                  <---------ANAC58                    --------->MYB46(3)                            <---------ANAC58          <--------                   --------->ANAC58                               <---------ANAC46         <-------GAMYB                   --------->ANAC58                            --------->GLK1(2)          <---------- ------AHL20(2)    --------->ANAC46                            --------->ARR14(2)     <---------ZAT14 ------YAB1   --------->ANAC46               --------->CCA1(2) <---------ARR14(2)     --------->ZAT14   tcattgtctcttatccaatccacccaattcaattggtctgaatcaagagatgagaacgttgagacaatccgtggactaagctcgcctctgctctgttgtg  6623700  Previous    Next  AGI:  At5g19620.1    Description:  OEP80 (ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA). similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G44160.1); similar to hypothetical protein OsI_006101 [Oryza sativa (indica cultivar-group)] (GB:EAY84868.1); similar to hypothetical protein OsJ_005573 [Oryza sativa (japonica cultivar-group)] (GB:EAZ22090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21933.1); contains InterPro domain Surface antigen variable number; (InterPro:IPR010827); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) Range:  from: 6623206    to: 6627848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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