Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->LBD16                                                                                  ----------->GT1                                                                            --------->ATHB12     ---------->DOF2                                                        <---------ICU4 -----At5g28300       <---------------AGL15                                --------->ICU4 ------GT1        --------->AHL20(2)                          <------ZmHOX2a(1)  <---------ANAC46 ---YAB1   <------ZmHOX2a(1)              <---------YAB1<-------TEIL       <---------YAB1         <-- -ICU4    <----------ID1     ----------->GT1        ------->TEIL   ------->TEIL <---------LBD16   --- >YAB1  <---------------AtSPL8         <---------YAB1 <---------SPL7     --------->YAB1           ---   ctgtcttaaaagaggacaaaataaacatttgtagtaaaaagattatagttaatgaacgtacagaggatggatgtttcatgattccggttaaaacttgaag  6621600              <---------GLK1(2)        <---------YAB1      --------->YAB1      <---------ICU4      <--------HAHB4          <---------ARR14(2)      --------->ATHB12        --------->ARR14(2)     <---------ATHB12         --------->GLK1(2)     <---------YAB1          ------>MYB83     --------->ICU4          ------>MYB46(1)  ------>ZmHOX2a(1)        --------->AtMYB61 -------ARR14(2)          --------->ANAC58    --------->ANAC58 --------->LBD16 ------>ARR14(2)          --------->ANAC58    --------->ANAC58--------->LBD16                  <----- ------>GLK1(2)<---------ARR11(3)      <-----------GT1       <---------LBD16           <----------DOF2   aatcctcatcattacagcatcttcagacaccaaatctgttttctccaaacgacaactagtaatcccggagacaatagaattcatagcatcttttgcacca  6621700                                ====================HOX2a_HOX2a                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                               =====================HOX2a_HOX2a                              <---------ARR11(3)                              --------->ARR14(2)                              --------->GLK1(2)                              <---------ARR14(2)             <---------DEAR3(1)                              --------->ARR11(3)           --------->ALFIN1                           <---------TOE1(3)               <-----------RAV1(1)                           <---------TOE2(3)             --------->At4g35610                 ===================HOX2a_HOX2a          <---------At4g35610                 ===================================HOX2a_HOX2a           --------->ARR14(2)                 ------>ZmHOX2a(2)                       <---------ZAT2--------->RAP2.6(2)                <------ZmHOX2a(2)                        ----------->RAV1(2)                ====================HOX2a_HOX2a          --------->ZAT2--------->ANAC46                ====================================HOX2a_HOX2a   --------->ATERF1(1)               <---------ARR14(3)                      <-----------RAV1(2)<---------ARR14(2)               <---------AGP1<------ZmHOX2a(1)         ================RAV<---------GLK1(2)               --------->ARR14(2)                    ================RAV <------NtERF2               --------->ARR14(3)                    ----------->RAV1(1)--------->LBD16               --------->ARR11(3)             ---------->DOF2--------->ALFIN1                     <--               <---------ARR14(2)            <------ZmHOX2a(1)  <---------ANAC46                  --- ------RAV1(2) <---------ARR11(3)<----------DOF2    ----------->HVH21 <---------LBD16<----------DOF2   ggtgttttctcatcgaagatctcgattttaaggatctttaagatggaggaaagagcgacagctgtggcgctagccggaatctcatcgctttgaataactt  6621800                                        <---------ARR14(2)                                        --------->ARR14(2)                                   --------->ANAC58                                   --------->ANAC58                                  <---------ZAT18                                  --------->ZAT18                              <-----------RAV1(1)                           ===============================HOX2a_HOX2a                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         --------->GLK1(2)                         <---------ARR11(3)                         --------->ARR11(3)                         <---------ARR14(2)                         --------->ARR14(2)           ----------->GT1================================HOX2a_HOX2a  ---------->DOF2       <------ZmHOX2a(1) ================================HOX2a_HOX2a          ----------->GT1 <------ZmHOX2a(1)     --------->HSFB2a(1)         <------ZmHOX2a(1) =================================HOX2a_HOX2a    <---------TOE1(3)                                  - -------HSFB2a(2)      --------->HSFC1(2)        <---------TOE2(3)                    <---------MYB46(3) ------>HSFB2a(2)      <---------HSFC1(2)<---------ATHB12                   --------->CCA1(2) -------   cgaggaaaggagaaagataaaccgaaggatctatggtgcgccaatcttgttgaggattgaaaataagagctctaagagatttgagagattgttggactga  6621900                                                                                  --------->LBD16                                                                                 <---------ANAC58                                                                              ------->GAMYB                                                                             --------->MYB46(3)                                                                            -------->P                                                                            ------>MYB46(1)                                                                            ------>MYB83                                                                          <------------AtMYB84                                                                          --------->AtMYB61                                                                          --------->DEAR3(1)                                                                          <---------MYB46(2)                                                                          <---------MYB111(2)                                                                      --------->ZAT18                                                                      <---------ZAT14                                                                      --------->ZAT14                                                                      <---------ZAT18                                                                --------->ANAC58 <---------ANAC46                                                                --------->ANAC58 <---------ANAC58                                                             <------NtERF2--------->MYB46(3)                    <---------LBD16                         ------>NtERF2 <---------MYB55(2)                 <---------ANAC58      --------->HSFB2a(2) <---------bZIP60(1)--------->TOE2(2)        <---------ZAT14      ----------->GT1             --------->MYB52(1)--------->MYB55(1)      <-   <---------At5g28300      --------->DAG2       <---------WRKY12 <------ZmHOX2a(1)                --  --------->YAB1 <---------ANAC46      <---------HSFB2a(2)--------->RAP2.6(3)<---------MYB55(2)   <-- ------>TEIL     <---------ANAC58  <----------DOF2      ----------->HVH21 <---------MYB111(1) ------- -->ICU4--------->ZAT14   ---------->DOF2---------->DOF2----------->TGA1  <---------ALFIN1    <------   tgaatcacagtggtctgtttcttggggagaaaggtaactttctgaaaggggtctacgaatgacggcaaggactgcaccaacctccgtgttaagcatgcat  6622000                                  --------->CCA1(2)                                 --------->ARR14(2) --------GLK1(1)         ----------->HVH21 ------->GLK1(1)       <----------DOF2 <------ZmHOX2a(2)                                --------->WOX13(1) -------ARR11(3)  <----------DOF2<---------ARR14(2)     <-----------GT1               <---------ATHB12 -->YAB1<---------ARR11(3) <---------At5g28300     <---------DAG2              ----------->GT1 ---AtLEC2 <----------DOF2 --------->SPL7          --------->TOE2(3)      ---------->DOF2    <-------   gatatccctagctctttccgctttgctcttacggcgatacgatccatttctcaccttatcacactcttcttgccgataaagaagaaaaatcattcagcaa  6622100                                               <---------ANAC58  <---------------AGL15                                         <-----------RAV1(1)     --------------->AGL15                                         --------->ALFIN1        ------>ZmHOX2a(1)                                     <---------ZAT14            ----------------->AGL3                      <---------YAB1 --------->SPL7 <---------ANAC58         ---------->ID1          <---------------AtSPL8         <-----------------AGL3       <-----------RAV1(1)  <----------DOF2    <---------ANAC58------>ZmHOX2a(2)           <---------ANAC46 --At4g35610    ---------->ID1  <---------ANAC46    <---------ANAC58                     <---------MYB46(3)   ctgttttttttgttgttcttcgtttttattctttatgtgtacggtgttgccttgccttggtttgatcctatatttagtatataagttttagtggctgaga  6622200                                                                ------------>CBF                                                                <---------MYB52(1)                                                            <---------At5g28300                 <-----------GT1                            -------->P                --------->CCA1(2)       <---------ANAC58                                  --------->ZAT2            <---------TOE2(3)       <---------ANAC58                  <------ZmHOX2a(1)  --------->MYB52(1)     <---------YAB1      <---------MYB46(3)              --------->HSFB2a(2)<---------At4g35610<---------TOE2(3)     <---------ANAC46        --------->At4g35610    --------->YAB1      <----------DOF2             -   --------->ATHB12          <---------At4g35610    <---------ICU4   <---------ARR11(3)             <  ----------->HVH21<---------ATHB12   <---------HSFB2a(2)--------->At4g35610<---------TOE1(3)   <----   ctcagtgatgggtgagtttcaaccatttgtcatcacacatctaggaaaactccatcatcagctaccgtcaatttctttaaggcttaagatagaaaactaa  6622300                             <-------TEIL                                         <---------TOE2(3)      <---------HSFB2a(2) ======================HOX2a_HOX2a             <<<<<<<<<TBF1    --------->ANAC58 ------>TEIL              <------ZmHOX2a(1)               <---------TOE1(3)      ---------->DOF2 -------TEIL            <---------TOE1(3)        ------->TEIL       <-----------GT1      --------->ANAC58 -----TOE2(3)           <---------TOE2(3)<------ZmHOX2a(2)<---------TOE2(3)  <----------DOF2   ------   tgtacgttctgcaaaaattcagatttaaggatacattatttggatcaaacgtatgtgttcaaggtttttttttcttcttcttttaaagtagaagcaaact  6622400            --------->ALFIN1                                       <---------AtLEC2      <---------WOX13(1)                                       <----------DOF2         ------>ZmHOX2a(1)    --------->ATHB12              --------->MYB59   ------>ZmHOX2a(2)               <-----------GT1   <---------YAB1             <------ZmHOX2a(1)    <---------At4g35610             <-----------GT1   --------->ICU4             =============================HOX2a_HOX2a <---------At4g35610       ---- --->ZAT6 <---------ANAC46  <---------TOE1(2)      --------->At4g35610 --------->At4g35610      <----   ctacgatgattggagtggaaaccatttttgtaggattaggcctcttcatactgatctgagtcagactttgcatagctgaagtttttttcctctactattc  6622500  Previous    Next  AGI:  At5g19610.1    Description:  sec7 domain-containing protein. similar to GN (GNOM) [Arabidopsis thaliana] (TAIR:AT1G13980.1); similar to pattern formation protein, putative [Arabidopsis thaliana] (TAIR:AT5G39500.1); similar to H0207B04.10 [Oryza sativa (indica cultivar-group)] (GB:CAH65909.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79521.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65546.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) Range:  from: 6617748    to: 6622047    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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