Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->DEAR3(1)                                                 --------->DEAR3(2)                               --------->DAG2    --------->MYB46(3)                              ---------->DOF2    <------------AtMYB77                          <---------TOE2(3)     <---------At5g28300                    --------->AHL20(2)      --------->TOE2(3)                    --------->AHL20(1)   <---------ARR11(3)                    <---------AHL20(1)   --------->ARR11(3)                    <---------AHL20(2)   --------->GLK1(2)                   --------->AHL20(2)    --------->ARR14(2)                   <---------AHL20(2)    <---------ARR14(2)               --------->AHL20(2)    <------NtERF2------->GAMYB            ----------->GT1 <------ZmHOX2a(1)  <-----------GT1       <----------DOF2              <--         ---------->DOF2  <---------TOE1(3) <----------DOF2      <-----------GT1              -------   tctaaacaaatgaaagataaaataaattaaggaaaagtcggagtatctttaaccgcccttccactatttatcttttgtttgttttttgaaaacatggacc  6602900 <-------MYC3                                                                                      <- <-------MYC2                                                                                      <- ------->MYC2                                                 ------>MYB46(1)                      -- ------->MYC3                                                 ------>MYB83                        --- -------ALFIN1                   <---------ICU4             <---------MYB111(1)              -------- >TEIL           <---------HSFB2a(2)                        --------->MYB46(3)             ----------   gcacgttgtctctccagccctagaaaactacttcaacatttctctgtttcattcattttgcaccaactaaaaaacaaaaacataaaacaactggaaagaa  6603000                                                                                       --------->ANAC46                                                                                      ------->TEIL                                                                                  --------------->AtSPL3                                                                                  ------>ZmHOX2a(2)                                                                             <---------WOX13(1)                                                                            <---------ANAC58                                                                            <---------ANAC58       <-   <-------TEIL                                                             <---------ANAC46 <------- --------------AtSPL8                                              ======================HOX2a_HOX2a --------------AtSPL3                  ---------->DOF2             <------ZmHOX2a(1)  --------->SPL7 ------->DAG2                      <---------MYB46(3)          --------->MYB52(1) --------------->AtSPL8 ------->DOF2                     <---------AtMYB61            ---------->DOF2    <---------------AtSPL3 --->GT1     --------->DAG2       <---------DEAR3(1)        --------->At4g35610 <---------ARR11(3)<-- >DOF2      ---------->DOF2       --------->ALFIN1          <---------At4g35610 <---------AGP1    <--   aaaagtacagaacataaagtagttttgtttcattcggtggtgaaagaacagagacaagggagagctaaaggactagttgcttgatctgtacgtctctttt  6603100                                                                 --------->ANAC58                                                         ------>ZmHOX2a(2)                         --                                                       <---------ARR14(2)                         ---                               <---------ANAC58        --------->ARR14(2)                       -----                               <---------ANAC58    <-----------GT1             ----------->GT1  <---- ---------DOF2        <---------GLK1(1)         <---------AHL20(2)    ---------->DOF2      --------->DAG2 ---DOF2              --------->GLK1(1)     --------->AHL20(2)   ----------->GT1          ---------->DOF2 -------ANAC58       >>>>>>>>>>GATA-1    <----------DOF2<------ZmHOX2a(2)    ----------->GT1  ------- -------ANAC58  <---------ANAC46<----------DOF2--------->AHL20(2)--------->ANAC58     ----------->TBP   gctttcttctcttccattttgtggatttcatttgctttgttttcttttatataatacgatctgagacaagaaaaaagaagagagaaatataaaaaagtgt  6603200                                                                         <----------DOF2                                                                        ------>ZmHOX2a(2)                                                                       <---------RVE1(1)                                                                       <------ZmHOX2a(2)                                                                      <---------ARR11(3)                                                  --------->ANAC58    --------->ARR14(2)                                                  <---------ANAC55(2) --------->ARR11(3)                                                <------ZmHOX2a(1)     <---------ARR14(2)        --------->AHL20(2)                      ===============================HOX2a_HOX2a        <---------AHL20(2)              ------>NtERF2                 --------->AGP1      --------->CCA1(2)               <---------ANAC46                <---------ARR14(3)     <---------ARR11(3)              <---------LBD16                  <---------AGP1     --------->ARR11(3)          <---------AtMYB61--------->ANAC58    --------->ARR14(3)   ----------->GT1               --------->ALFIN1 ----------->GT1   ----------->ARR10             <-- ------->REM1(2)                 <---------------AtSPL3     --------->ZAT2                       <--- ------>ALFIN1           <------------CBF       ==============================HOX2a_HOX2a--------->ARR11(3) ---->ALFIN1        ----------->GT1  <---------At4g35610    <---------ZAT2               <---------ARR11(3) -----ANAC46       <------ZmHOX2a(1)<---------ANAC46        --------->At4g35610   --------->HSFB2a(2) -->ALFIN1 <------------CBF      <-----------RAV1(1)        <---------At4g35610   <---------HSFB2a(2)   gtggagagatataaattgagaggagtaaattgggaatggtgcggacattaggacgtaaactaagctggccaagatcttttagttttagaaagatgttcga  6603300                                                                                      --------->MYB46(3)                                            --------->AtLEC2            --------->ARR14(2)                                            --------->ANAC58            <---------ARR14(2)                                          <---------ANAC58            ----------->HVH21     --------->GLK1(1)                    <---------ANAC46            --------->LBD16------>MYB46(1)     <---------GLK1(1)           --------->ALFIN1   --------->ANAC46 --------->DEAR3(1)<---------ALFIN1 --------->ETT(1)    <----------DOF2      <---------ANAC58  --------->ANAC58         ------>MYB83 -------MYB46(3) --------->YAB1<---------O2 --------->ANAC58--------->ANAC58       --------->AtMYB61 ------AtMYB61  <-------TEIL   <---------ANAC46   <---------ALFIN1  <---------LBD16--------->DEAR3(1)   tggtcggaactctggacattcatctttctcttctcgtggggatggcatgcatacacccgagcacgaactcgccggacatgctgcaccatccactcgtaga  6603400                  ----------->GT1                                                 --------->YAB1                <-----------RAV1(2)                                              ----------->GT1               <------ZmHOX2a(2)                                        <---------AHL20(2)         <-              --------->ARR11(3)                                       <---------AHL20(2)       -----             <---------GLK1(1)                                         <---------AHL20(1)       <----             --------->GLK1(1)                     --------->YAB1      --------->AHL20(1)--------->AHL20(1)           <------ZmHOX2a(1)                ----------->GT1            --------->AHL20(2)<---------AHL20(1)   --------->YAB1 --------->At4g35610       <------MYB83           <---------AHL20(2)    <---------AHL20(2) --------->ANAC58 <---------ANAC55(2)       <------MYB46(1)       --------->AHL20(2)     --------->AHL20(2) --------->ANAC58 --------->ANAC55(2)      --------->MYB59        <---------AHL20(2)    --------->AHL20(2)   ggcaagcaaaataggagatcaggtaacatattagtgcaagtttatttggtaaatggtaatggcaaaattttaatttaatggaaatgaaaattttatttcg  6603500                                                                                                <----                                                                                            ---------                                                                                         <--------HAHB4                                                                                         <---------ICU4        <---------YAB1                                                                   --------->ATHB51     <---------YAB1                                                                      <--------ATHB1     <---------AHL20(2)                                                                 <---------ATHB12    <---------AHL20(2)                                                                  --------->ICU4    <---------AHL20(1)                           <-----------GT1                        --------->AHL20(2)    --------->AHL20(1)                          --------->RVE1(1)       --------->AHL20(1)  <--------    --------->AHL20(2)                          --------->CCA1(1)       <---------ARR11(3)  --------- --------->AHL20(2)                         --------->AHL20(2)          --------->ARR11(3)  <-------- --------ARR11(3)                        <---------HSFB2a(2)           --------->AHL20(2)--------->YAB1 ---->HSFB2a(2)                    <---------GLK1(2)             ----------->GT1        <---------ATHB51 -----HSFB2a(2)        <----------DOF2   --------->HSFB2a(2)     <---------ANAC46<---------ZAT18<----   agataatataatggtagaaagaaaactttaggtgaaagaatttctaaaaaatatccatttcatattttcgtaaatatatccattgcaccaataattaatt  6603600        <---------AHL20(2)        --------->AHL20(2)                           --------->AHL20(1)       <---------ATHB12                              <---------AHL20(1)                  --------->AHL20(2) -----ICU4             --------->GLK1(2) <-----------GT1                                 <---------AHL20(2) >AHL20(2)  -------->HAHB4           <---------ICU4  --------->ARR11(3)              --------->AHL20(2) -AHL20(2)  --------->YAB1          --------->AHL20(2)                               <---------AHL20(2) >AHL20(1) <---------YAB1           <---------AHL20(2)      -------->ZAP1        <---------AHL20(2) -AHL20(1)<---------TOE2(3)     <---------ATHB12    <---------AHL20(2)      ------>ZmHOX2a(1) -----AHL20(2)        <---------GLK1(2) <-----------GT1   <---------WRKY18(1)   --------->AHL20(2)  -   aatgctccaattaatgataatgtagaatctctaaatcatttattacccgcttatatatattgaccgaaataagaagtcctcattttataaattatatata  6603700                                                     -------->HAHB4                                                     -------->ATHB1                                                     --------->ATHB12                                                     --------->ATHB51                                                     <---------ICU4                                                    <---------YAB1                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                                 --------->AHL20(1)                                                 <---------AHL20(1)                                              --------->ATHB51                                              <---------ICU4                                              <--------HAHB4                                              <--------ATHB1                     ----------->GT1     --------->LBD16                    --------->ANAC58    --------->ANAC46                    --------->ANAC46    --------->ANAC55(2)                    --------->ANAC58    --------->ANAC58             --------->ATHB12           --------->ANAC58             --------->ATHB51    --------->ANAC55(2)--------->ICU4            <---------AHL20(2)   <---------ANAC55(2)<---------ATHB51            <---------YAB1 --------->AHL20(2) --------->YAB1         <---------ARR11(3)--------->AHL20(1)<---------ATHB12         --------->ARR11(3)<---------AHL20(2)--------->ICU4--------------->AGL15        --------->YAB1    --------->AHL20(2) <---------ATHB51           ------->GAMYB  <------ZmHOX2a(1)<---------LBD16     ------>ZmHOX2a(2)   <---------------AGL15     <---------AHL20(2) ---------->GT1   <---------AtLEC2     <---------LBD16    <-----------------AGL3     --------->AHL20(2)   gacaggaaaatgatattattgcacggaaaaaaattatgtgatccgcaataattaattattgctaaatttgataaccacataaacgaataaaatgttatcc  6603800  Previous    Next  AGI:  At5g19560.1    Description:  ATROPGEF10/ROPGEF10 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF8/ROPGEF8 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT3G24620.1); similar to pollen-specific kinase partner protein [Lycopersicon esculentum] (GB:AAW57535.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 6603293    to: 6606450    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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