Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ATHB12                                                                                  <---------ATHB12                                                             --------->WRKY12    ------>MYB46(1)                                       <------ZmHOX2a(1)     --------->WRKY38(1) ------>MYB83                                     <---------TOE2(3)      <---------MYB52(1) <---------MYB59                                --------->GLK1(2)          <-------GAMYB       <---------MYB111(1)      ------->GAMYB            <---------GLK1(2)          <---------ANAC58     --------->MYB46(3)     --------->MYB46(3)        <---------ARR14(2)         <---------ANAC58     <---------MYB46(2)  --   --------->MYB52(1)     <---------ARR14(2)              <---------ANAC46 <---------MYB52(1)      <- ------>GLK1(1)           --------->ARR14(2)          <----------DOF2<---------ZAT14               <- -------GLK1(1)          <---------CCA1(2)       <------NtERF2       ---------->DOF2               -- -->YAB1                 <---------GLK1(1)       <---------At4g35610 --------->ZAT14               <-   aaatccaacggacttggagactagttcatatccgattctgaggaaaatggcagaggctttgcgttggccactaaaccggtaccaaacattggcattgcta  6597600                                       --------->ARR11(3)                                       <---------ARR11(3)                        ------>ZmHOX2a(2)                       --------->GLK1(1)                      <---------ARR11(3)                                             ----------->GT1           ------->TEIL<---------GLK1(1)                                         <---------ZAT14      <---------At4g35610             <---------GLK1(1)                       <------MYB83<----------      --------->At4g35610     <----------DOF2                                 <------MYB46(1) ------->AHL20(1)     --------->ARR14(2)        <---------MYB46(3)         --------->ARR14(2) --------ARR11(3)     <---------AGP1  --------->GLK1(1)                    <---------ARR14(2) --------ICU4         <---------ARR14(2)       <---------TOE1(2)     -------->P  --------->ZAT14 ------->ARR11(3)     --------->ARR11(3)     <----------DOF2    --------->ZAT18  <-------TEIL --------AHL20(1)    <---------CCA1(2)<---------At4g35610  ----------->HVH21 <-----------------------TaNAC69(2)   atattttcatctgtacttgcactggatctctgcttttgggagctcttctttggttcgacaattgactgggctacccagataggtgcagagttataccagt  6597700                                    --------->YAB1                                  --------->GLK1(2)                           --------->ZAT2                           --------->At4g35610                                             --------->ANAC58                           <---------At4g35610                  <---------At5g28300        --------->ANAC58                           <---------ZAT2                <---------ARR11(3)         <-------GAMYB<---                          ----------->RAV1(1)            --------->ARR11(3)        <-----------RAV1(1)                       --------->ANAC46           <-----------HVH21             XXXXXXXXXXXXXXXXXXXX>MIR859 -GT1               ----------->HVH21<---------------AtSPL8 <----------DOF2--------->O2  ---------->DOF2   ttatagataatacaaaaattgtatgacgcagcacagaatcatgtacaaacagtgtcaaataccttttacagtgtcccaagtctctctgttgtaaagcaaa  6597800                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                     --------->AHL20(2)                                                                                     <-----------GT1                                                                                  <---------ICU4 ----                                                                                 --------->AHL20(2)                 --------->GLK1(1) --------->ZAT6            <---------TOE2(3)   <---------AHL20(2)        <---------bZIP60(1)   <---------ANAC55(2)        --------->YAB1          --------->AHL20(1)        --------->bZIP60(1)   ----------->GT1           <---------YAB1          --------->AHL20(2) ------ICU4 ---------->DOF2   --------->ANAC55(2) <<<<<<<<<<MYB80        ----------->GT1     <-------   catggctctgatgtcaaagaaatctattgaataggtaactctagttgtttttggtttgatgataatgtttttatgaagaaaaaaaaattacttaataaat  6597900                                                                                                    <                                                                                                    -        ------------------------>ANAC81                   ---------->DOF2                           <       <---------GLK1(1)                           ---------->DOF2                             ------   --------->YAB1                           ------------------------>ANAC81                  -------- ------->GT1            <----------ID1      <-----------HVH21   <------------CBF         --------->AHL20(2) --AHL20(2)    ---------->DOF2        ---------->DOF2----------->GT1              ----------->TBP   -   ggaaattagaattcagacaaagaaaaacgacaaaaaaaaaaaaagaagtcagacaaagaaaaaaggaattggaatatttctcgtataaaaaaaaaatgta  6598000                                                                            --------->DAG2                                                                           ---------->DOF2                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                   <---------ALFIN1                                          --------->At4g35610      ----------->RAV1(1)                                          <---------At4g35610     --------->DEAR3(1) <---------AHL20(2)                   <---------ALFIN1            --------->RAP2.3(3) ---------AHL20(2)                    ------------>AtMYB77       --------->ATERF1(1) -------->AHL20(1)                    ----------->RAV1(1)        <------NtERF2 ---------AHL20(1)                --------->DEAR3(1)            --------->PCF2 --->AHL20(2)                --------->ANAC58                   <---------ATERF1(1) --->GT1--------->HSFB2a(2)  --------->ANAC58                   ------>NtERF2 -------->AHL20(2) *TSS      --------->ANAC46                  --------->DEAR3(1) <---------GLK1(2)   aataaaatttctcgacttgttgggcaagttcaagcatcgcccacagttgccaaatcgcaatataggcgcccacagctaaaagttgattctcaaaacctct  6598100                                                                  <-------TEIL                                                                 >>>>>>>>>>>>>>>>>LFY                                                                 <------ZmHOX2a(2)                                                                --------->AGP1                                                                <---------ARR14(2)                                                                --------->ARR11(3)                                                  ------>ZmHOX2a(1)                                               =========================HOX2a_HOX2a             <----                                 <----------DOF2  ======================HOX2a_HOX2a             <----                               <------------------------ANAC81  <---------ARR11(3)             ------                --------->AHL20(2)             ------>ZmHOX2a(1)--------->ARR14(2)             ------  <----------DOF2  ---------->DOF2   <-----------GT1 <---------At4g35610                       <-----   ctctctttgtgaacaagattaaaaagacgacttctcttttaacttattcctcctctgcttcttcaagatccattgtctgcaatttcaatcccttgtctcg  6598200                                      --------->HSFB2a(1)                                      --------->GLK1(1)                                  --------->LBD16                                 <---------HSFB2a(2)                           ------->PIF5<---------ARR11(3)                           <-------MYC2--------->ARR14(2)                           <-------PIF5<---------ARR14(3)                           <-------MYC3--------->ARR14(3)       <---------ANAC58    ------->MYC3<---------ARR14(2)                                <-----------GT1       <---------ANAC46    ------->MYC2--------->ARR11(3)                            <---------DAG2       <---------ANAC58 <---------ANAC58   ------>ZmHOX2a(1)                         <----------DOF2 -------HVH21           <---------ANAC46 ------>ZmHOX2a(2)                <---------GLK1(1) -------TGA1            <---------ANAC58<------ZmHOX2a(2)                --------->ARR11(3) --->bZIP60(1)    <---------TOE1(3)  ----------->ARR10        <----------DOF2  ------>ZmHOX2a(1) --->bZIP60(2)    <---------TOE2(3)--------->LBD16      <-----------RAV1(1)------>ZmHOX2a(2) ----bZIP60(1)--------->HSFB2a(2)--------->HSFB2a(2)   ------->TEIL      <---------ARR11(3)   tcatggattccgtcttctctaacgttgctcgtgctcccgaagatcctattctcggtgtatgtcgcttctctgtttgatctcctcttacttttttcgcgtt  6598300                                                        <---------MYB46(3)                                                        ----------->GT1                                                       <---------ANAC46                                                      --------->RAP2.6(3)                                                     ------------>AtMYB77                                                     --------->MYB52(1)                                                    ----------->TGA1                                                  --------->YAB1                                                  <---------ICU4                       <---------ANAC58          <---------ATHB12                       <---------ANAC58      --------->LBD16                   <----------DOF2          --------->ANAC46                                     ----               <---------ANAC58         --------->GLK1(1)    <---------CCA1(2)            <----------               <---------ANAC46         <---------GLK1(1)<-------GAMYB               <---------DAG2               <---------ANAC58        <---------MYB52(1)--------->At5g28300         <----------DOF2            <-----------GT1           <-------GAMYB ----------->HVH21       <---------ANAC58 <-------         <---------AHL20(2)   ------>ZmHOX2a(2)  --------->ICU4             <---------ANAC58 <-------   ttagttgattttttattccgtctttgcttcgatctcactcggttatccgaaatcatgacggttatatctgattttagtgcgtctctactttttttccgtc  6598400                                                       <---------YAB1                                                    <---------YAB1                                               --------->CCA1(2)                                              --------->ARR14(2)                                     --------------->AGL15 ------>ZmHOX2a(2)                   <---------------AGL15 ------->HVH21                      <-----------------AG -GT1                               <-----------------AGL1                                         -- --ANAC58                         <-----------GT1<---------YAB1                                  <--- --ANAC58            <---------GLK1(1)        <---------ARR14(2)                                 ----   tgatcggagagagttgggatttgatttctctgtgttttactcgatttggatatgattcttatttggctactgggaattagaagacatatgactctcgatg  6598500  Previous    Next  AGI:  At5g19540.1    Description:  similar to unknown [Brassica napus] (GB:AAY21212.1); similar to unknown [Brassica napus] (GB:ABP73257.1); similar to unknown protein [Brassica napus] (GB:ABN48558.1) Range:  from: 6595704    to: 6597891    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g19550.1    Description:  ASP2 (ASPARTATE AMINOTRANSFERASE 2). Identical to Aspartate aminotransferase, cytoplasmic isozyme 1 (ASP2) [Arabidopsis Thaliana] (GB:P46645); similar to ASP4 (ASPARTATE AMINOTRANSFERASE 4), catalytic/ pyridoxal phosphate binding / transaminase/ transferase, transferring nitrogenous groups [Arabidopsis thaliana] (TAIR:AT1G62800.2); similar to ASP3 (ASPARTATE AMINOTRANSFERASE 3) [Arabidopsis thaliana] (TAIR:AT5G11520.1); similar to ASP4 (ASPARTATE AMINOTRANSFERASE 4), catalytic/ pyridoxal phosphate binding / transaminase/ transferase, transferring nitrogenous groups [Arabidopsis thaliana] (TAIR:AT1G62800.1); similar to unknown [Populus tricho Range:  from: 6598019    to: 6601821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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