Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ARR11(3)            --------->ZAT2           --------->ANAC58           --------->ANAC58     --------->GLK1(1)   <----------DOF2       --------->MYB46(3)                                                         < --------->At4g35610   <---------DOF5.7(2)        --------------->AtSPL8                       ------   atcagctttggccaagctctcttgttaacgactgatttcaattggtaatagttctgttccttcttatattctcttaacatgtttatattcttaagtttaa  6595300                                                                <---------ANAC58                                                                <---------ANAC46                                                                <---------ANAC58    --------->ZAT6                                 <---------ZAT2   >>>>>>>>>>AtWER                                 <---------At4g35610  --------->MYB52(1)                               --------->At4g35610                       <------- ---------MYB52(2)               --------->At4g35610          <-----------GT1             <---------- --->YAB1     <----------DOF2    <---------At4g35610      <---------AHL20(2)           <---------AHL20(2)   taactaacagtagttcctttctagggatgaagttgagcttagaatggttatggagctgattttttttcgtgcttcagtctcaacttcatttttttcttta  6595400                                                                             --------->ATHB12                                                                             <--------ATHB1                                                                            --------->ICU4                                                                 ---------->DOF2           <-------GAMYB                                                               <---------AHL20(2)         <----------      <---------AHL20(2)                                      <---------AHL20(2)   <---------TOE1(3) ---DOF2      --------->YAB1                           ----------->GT1      <---------ATHB12 -GT1--------->AHL20(2)                    ----------->GT1    --------->AHL20(2)   <---------TOE2(3)   tggccaattttatcaaacaaaattggcatttagcaaaaacccaaaatgaaaaacatatggctaatttaaaagttcccaatgatttatggtttctgttgtc  6595500                                                                  --------->YAB1      <------MYB46(1)                                                          ----------->GT1             <------MYB83                                                          <------MYB83               --------->MYB59                --------->ANAC46                          <------MYB46(1)        <------MYB46(1)                --------->ANAC58                         --------->MYB59         <------MYB83 -RAV1(1)       --------->ANAC58 <-----------GT1         <---------AtMYB61 <---------MYB52(1)   ccatatagatttatgaacaaggaatagaccatattttactctcttggtttagaactggtttggttaaatcatattcagttatttggttcggtttactaag  6595600                                                                                <-----------HVH21                                                                               --------->ANAC46                                                                               --------->bZIP60(2)                                   <-------MYC3                              <---------ALFIN1                                   ------->MYC3                      --------->ARR14(2)                                  ----------->GT1                    <-----------ARR10                   <---------RAP2.6(2)                               --------->ARR11(3)            <-           <---------AHL20(2)     <---------ANAC46                   <---------ARR11(3)         <<<<<    --------->ANAC46    <------NtERF2          ------>ZmHOX2a(1)    --------->CCA1(1)       <--------  <-----------GT1<-----------RAV1(1) --------->REM1(2)              --------->RVE1(1) --------->ANAC46   taattcaccgaatttttttttgtggccgaagtagaaacgtgtaaacttcctctggttgaaaaatggcgaaatatcttctccacatcacacactagttctt  6595700                                                                                        =============                                                                                  <------MYB83 ------                                                                           <---------------AGL15                                                        <---------At4g35610--------------->AGL15                                                        --------->At4g35610------>ZmHOX2a(1)   <-----                                                      <---------ZAT18     ===========================                                                    <-----------HVH21     <-----------------AGL1                    --------->ANAC55(2)             <------NtERF2  <---------RAP2.6(3)  ------>ZmHOX2a(1)    *TSS            <---------ANAC55(2)           <---------DEAR3(1)      <-----------------AGL3    ------------>CBF----------->GT1               <---------ANAC46 --------->ORA47(1) ---------------  <---------At4g35610  ---------->DOF2            <---------DREB2C(2)     <-----------------AGL2  --------->At4g35610--------->LBD16      <---------ARR14(2)       ------>NtERF2  <------MYB46(1) --------At4g35610 <---------LBD16        --------->ARR14(2)      --------->DEAR3(1)--------->ARR14(2) <<<<TBF1--------->TOE2(3)               <------ZmHOX2a(1)  --------->KAN4(2)  <---------MYB52(1)  <- -ARR11(3)    <---------MYB52(2)  --------->TOE1(2)<---------MYB46(3)  ------>ZmHOX2a(1)=============   cttctgctcaatctcaactatcccgtaaaacaaaaacgagggaggaaccatggcggtgagctcattcgccgtccttcctccatttggttcctcatacagc  6595800            <------ZmHOX2a(2)           --------->ARR11(3)           <---------ARR11(3)                             --------->TOE2(3)           --------->ARR14(2)                           <-----------ARR10           <---------ARR14(2)                           <---------ARR14(2)           --------->AGP1                               --------->ARR11(3)           <---------AGP1                               --------->ARR14(2)       <---------MYB52(1)                               <---------ARR11(3)    --------->MYB46(3)                                 <---------GLK1(1) --------->MYB46(3)     ---------->ID1                 --------->GLK1(1) ===================HOX2a_HOX2a                        <---------CCA1(2) --->At4g35610       <<<<<<<<<TBF1          <---------HSFB2a(1) ----At4g35610      <------------------------ANAC81 --------->LBD16 ===MADS_MADS------>ZmHOX2a(2)              --------->HSFB2a(1)                       <---------MYB52(1) -->AGL3 ----------->ARR10                  --------->HSFC1(2)       --------->ARR14(2)--------->WRKY12 --------ALFIN1   <<<<<<<<<TBF1             <---------HSFC1(2)  --------->MYB52(1)   <-------GAMYB ==================HOX2a_HOX2a<-----------GT1     <---------LBD16    <---------ARR14(2)--------->WRKY38(1)   tccacaaccgatagatcttcttcttcttcgttttactcatcttcgaaacttctccgcatatctcaataccggttccagtcaaattcccgttgtccaaatg  6595900                                                   <----------DOF2                                               --------->ABI4(1)                                               ------>NtERF2                                              --------->RRTF1(3)                                              --------->RAP2.6(2)                                              --------->DEAR3(1)                                              --------->RAP2.3(3)                                              --------->RAP2.3(2)                                             <------NtERF2                                             --------->RAP2.3(1)                                             --------->ATERF1(1)                                             --------->ORA47(2)                                             --------->DEAR4(2)                                             --------->ERF1                                            <---------RAP2.3(1)                                            <---------RRTF1(1)                                            ------>NtERF2                                            <---------ATERF1(1)                                    <-                                           --------->DEAR3(1)                                      --                                           --------->O2                                            <-                                           <---------DEAR3(1)                                      <-                                           --------->ANAC46                                    ------                                           <---------O2      <---------ARR14(2)                ------                                        ----------->HVH21<---------HSFB2a(2)                   ------           --------->ZAT18          <---------ANAC58     --------->HSFB2a(2)           ----------->GT1      <---------ANAC46              <---------ANAC58     --------->HSFC1(1)       <---------ANAC58 --      <---------ANAC58            <---------YAB1   <---------DAG2           <---------YAB1     ------      <---------ANAC58       <---------At4g35610<------NtERF2--------->ARR14(2)   <---------ANAC58---   tgttcgtctcgtgctcactgaatcagccttctgatgatgcttccgacgccgccctttttctcgaatccaattcaattgctgattacatgcggttcaaacg  6596000          --------->LBD16         --------->ANAC46         --------->LBD16        <-----------------AGL1    ------>NtERF2    <---------ALFIN1   ----------->HVH21   <---------ETT(1)  --------->HSFB2a(2)  --------->DEAR3(2) --------->SPL7 --------RAP2.6(3) ---->NtERF2 ----------HVH21                                                                                  --- --------SPL7                                                                                     --- --->ANAC58                                          --------->ANAC46                             <-- ->GAMYB<---------LBD16                       --------->MYB52(2)                                  --- --->ANAC58 <---------ARR14(2)            --------->YAB1                                          <-- ------->ABI4(1)                     --------->ZAT14 --------->ANAC58                       <-------- --->ANAC46 --------->ARR14(2)       <---------ZAT14 --------->ANAC58               <----------DOF2 ------>DEAR3(1)     --------->TOE1(2)   <---------ATHB12             <---------GLK1(2)    <---------   ccgtcccgaccccggaaatggtaccagcgagttgcagactgcaatcgtgagttacaagaaacgtttcccttggattcttctcaacccttttcttcaggtt  6596100                        --------->GLK1(1)                        <---------GLK1(1)                                                  <------MYB46(1) ------>TGA2(1)    <---------ANAC58                                                        <------MYB83 ------>REM1(1)<---------ANAC58             ----------->GT1                               --------->MYB59 -------TGA2(1)<---------ANAC58            <---------TOE2(3)                           --------->ARR14(2) ------>bZIP60(1)  <---------ANAC58       --------->DAG2                               <---------ARR14(2) -------bZIP60(1) --------->ZAT2         ---------->DOF2           <---------ICU4  <-------PIF5 -TOE1(3)     --------->MYB52(2)--------->AHL20(2)      <-----------GT1            ------->PIF5 --RAV1(2)  <---------MYB52(1)  <---------AHL20(2)    <---------YAB1            <-----------RAV1(2)   acatcaccatctctgttacttgctgggtttccatttaaatcgataaaggtaacatttttatcgatttcatcatctctatattgcaggtggatttggtctc  6596200  Previous    Next  AGI:  At5g19540.1    Description:  similar to unknown [Brassica napus] (GB:AAY21212.1); similar to unknown [Brassica napus] (GB:ABP73257.1); similar to unknown protein [Brassica napus] (GB:ABN48558.1) Range:  from: 6595704    to: 6597891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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