Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                --------------->AtSPL8                                                                        <---------WOX13(1)          -                                                                      --------->ATHB12              -                                                                     --------->ICU4                 <                                                                     <---------YAB1        --------->HSFB2a(2) <---------ARR11(3)                                 --------->AHL20(1)<---------ICU4       <---------HSFB2a(2) ------->ANAC46                              ----------->GT1       --------->YAB1  <-----------GT1 <- ------->ANAC58                          <----------DOF2     --------->YAB1     <---------------AtSPL3 ------->ANAC58                        ------->TEIL <---------AHL20(1)<--------ATHB1------->TEIL  <-- >ZAT6         --------->YAB1 --------->AHL20(2)    --------->ARR11(3)--------->ATHB51<---------DAG2<   caagaaatttgtagtaatcaaaactatacaaaataaacatgaactttaagtaaaaatattgtttcataagaataattgacaaaatgtacctttccaaaac  6590800           ------->GAMYB        ----------->RAV1(1) <------MYB83 <------MYB46(1)       --------------->AtSPL8 <---------ANAC58  <---------AHL20(1) <---------ANAC58  --------->ARR14(3) -------->MYB46(2) <---------ARR11(3)                <<<<<<<<<TAC1 -------->MYB52(2) <---------ARR14(3)             --------->ZAT18 -------->MYB55(2) <-----------ARR10              --------->ZAT14                                 <-- ---------AtMYB61  --------->ARR14(2)             <---------ZAT14 ----------->GT1              ------ --------MYB55(1)  --------->AHL20(1)  <---------ANAC58         ---------->DOF2   ---------->DOF2---- -------MYB52(1)   --------->ARR11(3)  <---------ANAC58  --------->ETT(2)        --------->AHL20(2)-- ---------MYB46(3) <---------ARR14(2)  <---------ANAC46  <---------ETT(2)----------->GT1   <------ZmHOX2a(1)   gtttggtgtccaacagagcaatatcttggtactcactagttccttgatggagaacactgtcgacaaaaaagaaaattgtaaaataaaagacgaggagaat  6590900           --------->ANAC58                                              <---------MYB46(3)           --------->ANAC58                                      <---------YAB1 -------AHL20(2)                                               --------->YAB1 --->GLK1(2)  <---------WRKY12   --------->GLK1(2)           <---------ARR11(3)                     < ----->AHL20(2)   <---------------AGL15        ---------->DOF2<------ZmHOX2a(2)                     < ------->AHL20(2) --------------->AGL15  <---------ANAC46    --------->ARR11(3)                     <   ttaaaataagagcaagtcaacttgaaatggaagaaaacctgttgagggcaaaagaccacttgagatcatcatcgatggtttcttcataccaatggcagtc  6591000                                    <----------DOF2                                   <---------ANAC46                                   <---------ANAC58                                   <---------ANAC58                              <---------ANAC46                              <---------O2                              <---------TGA1a                              <---------bZIP60(2)                              <-----------RAV1(1)                         <------MYB46(1)                         <------MYB83                        --------->MYB55(2)       <---------HSFB2a(2)             <---------ANAC46 =================bZIP_DOF    <---------ARR14(2)           <---------ZAT14    <---------REM1(1)  --------->HSFB2a(2)          --------->ALFIN1 ----------->HVH21     --------->LBD16    <--------P          <---------MYB46(3)      <---------LBD16                           --------->ARR14(2)    ====================================MYC_MYB<---------LBD16                            <---------ARR14(2)  <---------MYB46(3)   --------->ALFIN1     <---------GLK1(1)                            <---------CCA1(2) ---------ANAC46     <---------ANAC58      --------->ARR14(2)                            --------->GLK1(1) ---------ANAC58     <---------ANAC46      <---------ARR14(2)  --------->LBD16   <-----------HVH21 ---------ANAC58     <---------ANAC58      ------->TEIL    --------->ARR14(2)--------->ANAC46       <   ttgctggttagagtggagggtttgagtgggtgatgtggctttgtgaatctccgggaacccatttccgaacatgacctctacggcttcacccatatccaag  6591100                      --------->ALFIN1                                          <---------ARR14(2)            ----------->GT1                    ---------->DOF2                ----------->ARR10         --------->CCA1(2)                  <------ZmHOX2a(1)       <------MYB83<---------ARR11(3)        <---------ARR14(2)                ----------->GT1          --------->MYB46(2)        --------->ARR11(3)         --------->CCA1(2)               <---------MYB46(3)        <---------ARR11(3)        --------->ARR11(3)            --------->ATHB12--------->ARR14(2) <-  <------ZmHOX2a(1)--------->DAG2 <---------ARR11(3)          <---------TOE2(3) --------->ARR11(3)--- ---------ANAC46  ---------->DOF2 <-----------------------TaNAC69(2)<------MYB46(1)--------->GLK1(2)   ttgaggagaagatatagagaaaaagtgtgagtgagagatatagagaggaaaaagagtgctacttaatgtttggtgatgggacgatattctatggagacaa  6591200                            --------->REM1(2)                           --------->ALFIN1                         <---------ANAC58                                                          --                         <---------ANAC46                                                      <-----                         <---------ANAC58       <---------MYB52(1)                            <------               --------->GLK1(2)               <-------GAMYB                                 <-------             *TSS      <------MYB83           <---------ANAC58                               <-------        <---------YAB1 <------MYB46(1)        <---------ANAC58                               --------   <---------ANAC46   <---------AtMYB61      <---------TOE1(2)                               --------   <---------ANAC58  <--------P           <---------ANAC58                                  <--------   <---------ANAC58<-----------RAV1(1)    <---------ANAC46                                  <-------- ---------DOF2<---------GLK1(2)           <---------ANAC58            ----------->GT1       --------- ------>TOE2(3)--------->ARR11(3) ----------->GT1          <---------ATHB12        --------->YAB1 <--   cctttgcgtttttatagaatcttgttggtgtgtagaatgttatatcgtgcgttatccacaaatgaagggaaaatgaaaaatgctagcatgagtaatgatt  6591300                                                                                                   <-                                                                                                <---- --------->RAV1(1)                                                                            <------ ----WOX13(1)                                                                                 <------ ------CBF                                                                                   -------- -ATHB1                                                                                      <------- --ICU4                                                                 --------->ZAT6     --------->YAB1 ->ATHB12                                                               <---------ALFIN1--------->bZIP60(1) >HAHB4                             <-----------HVH21          <---------TOE2(3)        --------->TGA2(1) -YAB1                              --------->LBD16            <---------TOE1(3)        <---------TGA2(1) -ATHB12                           <---------ANAC58           <-----------GT1           <---------bZIP60(1) >ICU4                             <---------ANAC58          <-----------GT1       <---------ICU4---- --------ID1          --------->At4g35610                   <---------AHL20(2) ------>ZmHOX2a(1)-----   gcgacagattacaactctacaatcttctgccaaaattccgtcgcatgcttatattttggcattttaacgtttcaacacttcctcatcgtgacatcataat  6591400                                                                                            <--------                                                                                           --------->ANAC55(2)      <----------DOF2                                                                      <---------ANAC55(2) --------YAB1                    <---------AHL20(2)                                       <-------TEIL -----YAB1            ----------->GT1                                                 --------------- ---ICU4         --------->CCA1(2)                                                    --------------- --HAHB4        --------->ARR11(3)                                                    <---------TOE1(3) ->ICU4         <---------ARR11(3)                                                    <-------------- --YAB1   <---------TOE2(3)  <---------AHL20(2)                    <---------TOE2(3)  <---------TOE2(3) ----->YAB1  <--------P      --------->AHL20(2)              <---------ZAT6 <---------AHL20(2) ---->ICU4<---------YAB1    <---------AHL20(2)          <----------DOF2     --------->AHL20(2)   tataagagatttatggtagatatatagtaatttatataaacttctattcatatatgttctttagtgtttaagtttgaaataaatgtttaaggtacataac  6591500                                                            ---------->DOF2                                                           <---------AHL20(2)                                                    ------->TEIL                                                  <<<<<<<<<EIN3                                             <------ZmHOX2a(2)                                         --------->SPL7<---------AHL20(2) -MYB59                                <---------SPL7 <---------AHL20(1)                         ---- >AtSPL3                              <---------ANAC58--------->ARR11(3)                  <------ZmHOX2a(1) >AtSPL8                     <-----------GT1 <---------ATHB12<---------TOE2(3)  <---------YAB1  <---- -AtSPL8            --------->ZAT14   <---------ANAC58<---------ARR11(3)<-----------GT1 <---------TOE2(3)   ctgttcaactagtttttgaaactatactagtttacaattttcgtccgatcaatgtatatatttaaagtatgtttctactattttgatttttaggataaat  6591600                      ------->MYC3                      <-------MYC3                   <---------ALFIN1                  <-----------------AGL1                 --------->SPL7                <---------PCF5               --------->LBD16              <---------HSFB2a(2)          <---------ANAC58          <---------ANAC58         --------->HSFB2a(1)             --------->TOE2(3)         <---------HSFB2a(1)             <----------DOF2                            --------->TOE2(3)         <---------HSFC1(2)       <---------MYB46(3)                              -------->P         --------->HSFC1(2)       --------->MYB55(2)                --------->YAB1------->TEIL      - ----->YAB1   --------->HSFB2a(2)<---------AtMYB61                  --------->TOE2(3)               - -----ATHB12 <---------LBD16    <---------MYB52(1)                <---------ARR11(3)<---------DAG2  -   cataccagagatgcttccggaccacgtttggaccggtggtttactttagtttaagacattacttcaactatcttagttgacatcaacctttttcccctca  6591700  Previous    Next  AGI:  At5g19530.1    Description:  ACL5 (ACAULIS 5). similar to SPDS1 (SPERMIDINE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT1G23820.1); similar to spermine synthase [Arabis gemmifera] (GB:BAB83654.1); contains InterPro domain Spermine synthase; (InterPro:IPR001045) Range:  from: 6588960    to: 6591213    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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