Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    ------>MYB46(1)                                                                  --------->ANAC58                          --------->ARR14(2)                      --------->ANAC58                          <---------ARR14(2)                      ------>MYB83                  <---------REM1(1)                          <---------DOF5.7(2)                --------->ZAT2          -------->P         <---------MYB52(1)                --------->At4g35610    <-----------GT1     --------->DOF5.7(2)                <---------At4g35610  <---------MYB46(2)   --------->TOE2(3)                <---------ZAT2       <---------MYB52(2)   <-------GAMYB        --------->YAB1    --------->GLK1(2)              <---------MYB46(3) ------GT1  --------->ANAC46    <----------DOF2          --------->MYB52(2)                         <   ccagacccattcataagcagctgtagcaattctgcattaactaacccttctctatttgttcgttaaccaagctaatgcgacttctcatttcatgttgttt  6585000                                                                                 <---------YAB1                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                              <---------YAB1                                                                            <--------HAHB4                                                                            <---------ICU4                                                                            --------->ATHB51                                                                           --------->ICU4                                                                           <---------YAB1             <-------TEIL                                                -------->ATHB1             <           ------->MYC3                                                  <--------HAHB4            --           <-------MYC3--------->bZIP60(1)                               <---------ICU4           ---       <------ZmHOX2a(2)                                                 --------->YAB1           <--      --------->ARR11(3)                                                --------->ICU4        <------      <---------ARR11(3)               ----------->HVH21     <---------------AGL15  --------------->AtSPL8 <---------ANAC46      <---------bZIP60(1)                   --------------->AGL15  <---------------AtSPL8 ---------TOE2(3) --------->YAB1<-----------GT1    <-----------GT1     --------->GLK1(2)      -------   tttacgtagatcacatgcattgatcacatcattttaactaaatgacactgaattttcaatattctatttgaagaatcattattaatatagtactacttaa  6585100 ---------TOE2(3)           <---------ARR14(2)                    --------->YAB1                 ---- -------->DOF2              --------->ARR14(2)                --------->AHL20(2)                <---- ------>AHL20(2)            <---------GLK1(2)             --------->AHL20(2)           ---------->DOF2 -------AHL20(2)         --------->YAB1           --------->ARR11(3)         <---------ETT(2)   ----- ---AHL20(2)     --------->AHL20(2)               <---------ARR11(3)       <-------GAMYB  --------->YAB1 -->AHL20(2)   --------->AHL20(2)             ---------->DOF2 <---------AHL20(2)    ----------->RAV1(1)   ttaaagaaactaaactaaaaaatataaacatattcgcgagacataagaaaaagatgtctataaattaaaaataagactgttgacaacaacaaagataaat  6585200                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                     <-------MYC2                                                                                     <-------MYC3                                                                                     ------->PIF5                                                                                     <-------PIF5                                                                                    --------->bZIP60(2)                                                                                    --------->TGA1a                                                                                    --------->O2                                                                                <------ZmHOX2a(2)                                                                                --------->CCA1(2)                                                                               --------->ARR14(2)                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                               <---------ARR14(2)                                                                   <---------ARR14(2)------->MYC2                                                                   --------->ARR14(2)------->MYC3                                                                   --------->GLK1(1)<---------O2                                                                  <---------GLK1(1) <---------TGA1a                  <----------DOF2                              --------->LBD16 --------->AGP1               --------->ARR11(3)                             --------->HSFB2a(2)   --------->ANAC46            --------->YAB1 <---------YAB1                     <---------HSFB2a(2) <---------ALFIN1 <- ----->AHL20(2)<---------ARR11(3)                   <----------DOF2<---------GLK1(1)--------->ANAC55(2) -----AHL20(2) <---------ARR11(1)                   ==========================================bZIP_DOF ---->AHL20(2)<---------CCA1(2)  <<<<<<<<<<<<<<<<<LFY        <---------LBD16  --------->GLK1(1)   <--   aaataagactgtattcatatctttttgttatcaattcacattggaagtataaaactttatttttctgggaatcccctctgagatccacgtgattttattt  6585300                                                         --------->AHL20(1)                       ---                                                         <---------AHL20(1)                  --------                                                         <---------AHL20(2)               ------->TEIL      <---------WOX13(1)                                --------->AHL20(2)              --------->ZAT18   <---------AHL20(2)                 --------->HSFB2a(2)--------->AHL20(2)           >>>>>>>>>>ATML1   --------->AHL20(2)              <-----------GT1      <---------AHL20(2)            >>>>>>>>>>PDF2  --------->AHL20(2)   <---------ANAC58               --------->YAB1                XXXXXXXXXXXXXXXXX --------AHL20(2)      <---------ANAC46          --------->AHL20(2)       ---------->ID1<---------ZAT18 -------AHL20(2)       <---------ANAC58   <---------GLK1(1)              <-----------------AGL1   ---   tttatttaattgatgcctatttgtttcttgtctgtatttactggaattcattttaaaaataaatttgttcaacttcttcgttttggtaaatgcacttata  6585400                                                        ---------->ID1                                                    <---------AtLEC2                                                    <---------ANAC46                                                    <---------ANAC58                                                    <---------ANAC58                                                <---------ANAC58                                            --------->WOX13(1)      --------->ARR14(2)                  <------ZmHOX2a(2)      <---------ARR14(2)                  ===================================HOX2a_HOX2a ------>At4g35610                        --------->ARR11(3)           ------>ZmHOX2a(1) ->YAB1                *TSS    <---------TOE2(3)<---------ANAC58      <---------------AtSPL3  <------ XXX>MIR844        ---------->DOF2       <---------ARR11(3)<----------DOF2--------->SPL7  ---------->ID1 ------>ZAT2  <----------DOF2 ---------->DOF2  <---------ICU4     <---------ZAT18      <----------DOF2   agctggagttttcgctctttgcaaagcagaactaaagtttcaagatcaatccttgcttggcctttcagtgtccttgtacgactatctctcttttcccttt  6585500                                                                ---------->DOF2                                                              --------->ARR11(3)                                                             --------->YAB1                                                        <---------MYB55(2)                                                        --------->MYB46(3)                                          <----------DOF2 ---------->DOF2                                      <XXXXXXXXXXXXXXXXXXXMIR156H               ---------->ID1   --------->DAG2         --------->ANAC46       <----------DOF2         ---------->DOF2         --------->ANAC58     <---------YAB1<----------DOF2    <XXXXXXXXXXXXXXXXXXXMIR157D  <---------MYB52(1)         <---------HSFB2a(2)       --------->ANAC58                      -------- ----DOF2<---------AHL20(2)  --------->HSFB2a(2)    <---------ZAT18                     <---------MYB52(1)   ctctgttatctttatttgtttctttaagtttctaaaagtgttttcttttttttgtccacccaaagataaagagagttcaatacctgctctgttttgtctc  6585600                                                                     <----------DOF2              <---------At4g35610                                    <---------DAG2      --------->YAB1                     --------->ARR11(3)   <---------MYB46(3)     <---------YAB1          <---------ARR14(2)               <------MYB46(1)   <----------DOF2 <---------CCA1(2)     <---------AHL20(1)   <------MYB83 <----------DOF2  <---------------AGL15      --------->ARR14(2)           <-----------RAV1(1)  --------------->AGL15 ------>ZmHOX2a(1)<---------ARR11(3)  <---------AtMYB61 -->ID1  --------->YAB1--------->TOE2(3) --------->AHL20(1) <---------MYB52(1)   tgtaacttttatagtaagcttatatcctaagtatacgtttgaatattttccaacgaggcactgttggtttactttttctttggaagtatacatatgtgtt  6585700                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                             ========                                                                                             --------                                                                                             <-------                                                       --------->ZAT14                       <------ZmHOX2a(2)                                                     <---------------AtSPL8                 <--------                                                  ---------->DOF2                           <--------                                            <---------MYB46(3)                              <--------                                            ----------->GT1                                 ---------                                            <------MYB46(1)                                 <--------                                            <------MYB83                                    <--------                         <----------DOF2   <---------AtMYB61                                ---------                    --------->RAP2.6(3)  <---------ANAC58                                  <---------CCA1(2)                   <-----------GT1       <---------ANAC58                                  <---------At4g35610               ------>ZmHOX2a(1)        <---------MYB46(3)                           <---------ANAC58             ------>ZmHOX2a(2)          --------->ATHB12        <---------AHL20(2)   <---------ANAC58        ----------------------->TaNAC69(2)<--------P --------------->AtSPL8       <----------DOF2<---   ttgggaaactgttgatccttcttacggctttcttcagaaaattggttggttttaaagagtactcatttacttagaaaaaatgttctttcttgcagatctc  6585800 ===================HOX2a_HOX2a ===================HOX2a_HOX2a ->GLK1(1) --GLK1(1)             <---------TOE2(3)                                     <---------WRKY12 -ARR11(3)             --------->MYB59            <---------ANAC46           <---------WRKY38(1)    - -ARR14(3)             <---------TOE1(3)          ----------->GT1            <---------WRKY45    <--- ---ARR10         <------MYB83                  <---------ANAC46            <<<<<<<<<<WRKY11  <------MYB46(1) >ARR11(3)        <------MYB46(1)              <---------AtMYB61            <<<<<<<<<<WRKY6   <------MYB83 -AGP1        <---------ARR14(2)          ----------->ARR10             --------->ICU4        <------ -ARR14(2)    --------->ARR14(2)      <---------At4g35610             <---------ICU4         <------- >ARR14(2) <---------TOE1(2)   <---------TOE1(3)<------MYB83          --------->ATHB12       <------- -------DOF2 <------ZmHOX2a(1) <---------TOE2(3)<------MYB46(1)    --------->YAB1       ---------->DOF2   ttttctagccttgtaggatttggtttaggttttaaggtttagcttagatttggtgtaaaattttgtcaatagtcattagtcaactaagtccaaagtcggt  6585900  Previous    Next  AGI:  At5g19520.1    Description:  mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein. similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12080.1); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12080.2); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12080.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN70429.1); similar to unnamed protein pr Range:  from: 6585423    to: 6588938    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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