Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ARR14(2)                          <---------TOE2(3)                        ---------->DOF2          ------>MYB83                      >>>>>>>>>MYB98             --------->MYB52(1)                    ------>ZmHOX2a(1)  --------->ANAC46                   <---------MYB59    --------->LBD16            <-----------GT1 <------ZmHOX2a(1)    ------>MYB46(1) <-----------GT1 ------>MYB46(1)     ----------->RAV1(1) ---->AHL20(2)   ------>MYB83--------->ARR14(2)<---------MYB59         --------->YAB1          ------   aaataaccttctcttaaccttcctaacaaaggatttgttccacagaaaacctaacaattcagtagaattggaatcataaacaagaccaaaaaaaacctgc  6552800                                           <------NtERF2                                          ------>NtERF2                                          <-----------HVH21                                          <-----------TGA1                                         --------->bZIP60(1)                                         <---------bZIP60(1)                                        <------NtERF2                                        --------->RAP2.3(1)                                       ------>NtERF2                                       <---------ATERF1(1)                                       <---------RAP2.3(1)                                      <---------DEAR3(1)                                   ----------->HVH21                                  ------>ZmHOX2a(2)                                  --------->DEAR3(2)                  --------->DEAR3(2) --------->SPL7               <---------ZAT14    ===============================HOX2a_HOX2a               --------->ZAT14   --------->CCA1(2)         <-----------TGA1        ================================HOX2a_HOX2a         <-----------HVH21       <------ZmHOX2a(2)         --------->ANAC46        --------->ANAC46         --------->ARR14(1)       ------>ZmHOX2a(1)        --------->bZIP60(2)     <---------ARR11(3)    --------->ARR14(2)        <---------O2            --------->ARR11(3)    <---------MYB52(1)        --------->TGA1a         <---------ARR14(2)  <---------DEAR3(2)        --------->O2            --------->ARR14(2)  <---------MYB46(3)                             --  <---------ARR11(3)          ----------->ARR10    <---------TOE1(2)         ------>ZmHOX2a(1)  ----- --->At4g35610 ----------->HVH21--------->AGP1     --------->SPL7           --------->TOE2(3)   <----   tcaatatccctcgtcactggaccggctctactaagatccgacggcgtcattcgtccgttcctcgacataaacaaaattcctcagtagcaaaccccttgag  6552900                                                                              <-----------HVH21                                                                        --------->ANAC58                                                                        --------->ANAC58                                                               --------->ANAC58                                                               <---------ANAC55(2)                                                               --------->ANAC55(2)--------->bZIP60(1)                                                               --------->ANAC46   --------->ANAC46                                                               --------->ANAC58   <---------bZIP60(1)                      --------->ZAT6                         --------->YAB1<---------ALFIN1        <-       --------->TOE1(3)                                    <---------ATHB12 --------->ANAC46      --       --------->TOE2(3)                                <---------ZAT18 --------->ANAC46           -- ------->LBD16--------->AHL20(2)                      ------->PIF5 --------->ARR14(2)         ------>ZmHOX2a(2) ---->At4g35610       --------->ANAC46                <-------PIF5--------->GLK1(1)     <----------DOF2 -----At4g35610     <-----------GT1       <---------ATHB12--------->WOX13(1) --------->bZIP60(2)   <-   ccgagaaaacctcaaaaaaaattcacactagtcgtcaagctcaaatcaatagacctcgtgcaatcacgaaatccactccacatcacatcactttgatcgt  6553000                                     <---------At4g35610                             <---------GLK1(2)                            --------->HSFC1(2)                            <---------HSFC1(2) ------>ZmHOX2a(2)          <---------At4g35610 --------ARR14(2)           --------->At4g35610                                           --------->WOX13(1) ------->ARR11(3) --------->ANAC46   --------->ZAT2                                <------NtERF2 ------->ARR14(2) --------->ANAC58   <---------ZAT2<-------TEIL               --------->DAG2 -------- --------ARR11(3) --------->ANAC58   --------->At4g35610    <------ZmHOX2a(2)---------->DOF2<--------   cgatcttggattcaaattcgaagccagagcagcttcttcagctccaatttagattcaaatcgatccaaacagtagaacaaaaagcgccgtttcaatcaaa  6553100                                                                                  <---------O2                                                                        --------->STY1(2)                                   --------->AHL20(2)                   <---------STY1(2)                            --------->At4g35610                    --------->GLK1(2)         ------>ZmHOX2a(2)     <------ZmHOX2a(1)      <---------At4g35610   <------ZmHOX2a(1)--------->ARR14(2)      <---------ARR11(3) ---------->DOF2       --------->HSFB2a(2)   --------->HSFB2a(2)   <-----------ARR10       --------->ARR11(3) ->YAB1                <---------HSFB2a(2)   <---------HSFB2a(2)   <---------ARR14(2)  <---------ANAC58 -ATHB12              <---------LBD16<-----------GT1              <---------GLK1(2)    <---------ANAC58   tgtaaaaggattcaaatatgttcttctggatgctgaattaaactcttcgagaggaattgaaacacagagaatctagctagagagacatggcatgatctat  6553200                                                      <---------YAB1          --------->DAG2                           --------->GLK1(2)         ---------->DOF2                          --------->ARR14(2)     --------->At4g35610                          <---------ARR14(2)     <---------At4g35610                          <---------GLK1(2)     --------->ZAT2                         *TSS <---------At4g35610     <---------ZAT2                         --------->DAG2    ------->TEIL                           ---------->DOF2                                <----------DOF2 --------->ANAC58                         ---------->DOF2                               <---------At4g35610 --------->ANAC46                       --------->AtMYB61      ---------->DOF2      <-----------GT1 --------->ANAC58               ---------->DOF2 ----------->ARR10              <----------DOF2 <-----   actacgcagcttaaagcgagcgagcgagagagaagaaagagaccaaaaggcagattctgactagagaaagctatacttcttctttttttctgctttctat  6553300                                                 >>>>>>>>>>>>>>>>>LFY                                                <-----------GT1                                              <----------TaMYB80                                              <---------GLK1(1)                                              --------->GLK1(1)                                              --------->CCA1(2)                                             ---------->TaMYB80                                             <---------ARR14(2)      <---------AHL20(2)                                             --------->ARR14(2)      --------->AHL20(2)                         --------->ICU4   --------->LBD16           <---------AHL20(1)                     <-----------TGA1    <---------ANAC46           --------->AHL20(2)                    --------->ANAC46     --------->ANAC55(2)        <---------AHL20(2)                <-----------GT1          <---------ANAC55(2)       <---------ATHB12             ----------->TBP        <---------ICU4       --------->ZAT14         --------->CCA1(2)        ------>ZmHOX2a(1)      <---------ZAT18         ------>ZmHOX2a(1)        --------->ARR11(3)       --------->TOE2(3)       <---------ZAT14        --------->TOE2(3)       <<<<<<<<<RAP2.2   <---------YAB1<-----------GT1 <---------ZAT14          --------->TOE1(3) -------CBF----------->TBP<---------ICU4<---------LBD16--------->ZAT14   <-----------GT1   tgattttttagatatataaaacccgtcattattctccttaattacgggatataccactgtacactcccaattaatttactctccttaaacattttgtatt  6553400                                --------->GLK1(2)                                --------->ARR11(3)                                --------->ARR14(2)                                <---------ARR14(2)                                <---------ARR11(3)                       --------->REM1(2)                               --------->GLK1(1)   <----------DOF2    <---------ANAC58                               <---------GLK1(1)--------->ANAC58      <---------ANAC58                     <---------DAG2             --------->ANAC58      <---------ANAC46           <---------ANAC46<---------ANAC46  <---------At4g35610   <----------DOF2 ----------->HVH21   <----------DOF2 <---------MYB52(1)         <-----------GT1        <----------DOF2   tctgtgactagtaatgtggaaggctttttgcgaatatctgttttttcagcaagcttttttcgaatattactttcgtgtatacatttgctctttttttttt  6553500                                                    ------>MYB83                                                    ------>MYB46(1)                                                   <---------------AGL15                                                  <---------MYB111(1)                                                  <---------MYB59                                                  <---------MYB46(2)                                               <---------ALFIN1                                              --------->MYB46(3)                            ---------->DOF2  -------->P ---------->DOF2                 --------->ATHB12            ------>MYB46(1)                                    <----                 --------->YAB1              ------>MYB83<---------TOE2(3)                  ---------                 <---------ICU4             --------->MYB55(1)                              <--------                 -------->HAHB4            <---------MYB111(1)    --------->ATHB12   --------->ANAC58                <---------YAB1             <---------MYB111(2)   <---------YAB1      --------->ANAC58                --------->ICU4             <---------MYB46(2)    --------->ICU4      --------->AtLEC2                <---------ATHB12    <---------AHL20(2) --------->AHL20(2)        <-----------HVH21               <---------TOE2(3)    --------->AHL20(2) <---------AHL20(2)      --------->ARR11(3)   --------->AHL20(2)    <----------DOF2   <---------MYB59     --------->YAB1  <---------ARR11(3)   ttggtttaaatttttctaatgatgggactttaaagaatttaaatacctaccacctaattaaagaagaatgattcaatagaagatgtcatgcaaattaaat  6553600         <---------ICU4         --------->YAB1        --------->ICU4      <---------ICU4                                                                               --     --------->ICU4                                                                                <-   --------->YAB1                                                                                <---   --------->ANAC55(1)                                                   <---------ICU4      <-------   --------->ANAC46                                                    <---------ARR11(3)    <------- <---------ALFIN1                       <---------YAB1                 --------->ARR11(3)   <-------- -------GT1               <---------GLK1(2)                         <---------YAB1          <-------- >AHL20(2)                <---------ARR14(2)                 ---------->DOF2           <---------ICU4 -AHL20(2) <---------YAB1 --------->ARR14(2)       ------->TEIL----------->GT1    --------->AHL20(2)   accacacataattatgttatttgtaatggatactctatgactatgatgtaatgtattttcttcaaaagttataaatcttgacattttaaaaattgcttta  6553700  Previous    Next  AGI:  At5g19420.1    Description:  Ran GTPase binding / chromatin binding / zinc ion binding. similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G42140.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to PRAF1, Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42840.1); similar to putative ZR1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87854.1); similar to unnamed protein product [Vitis vinifera] (GB: Range:  from: 6547640    to: 6553244    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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