Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->At4g35610                  ------>NtERF2                 <---------DEAR3(1)            <-----------HVH21          --------->ALFIN1       --------->ATERF1(1)      --------->ABI4(1)      ------>NtERF2     <---------DEAR3(1)     --------->RRTF1(3)     --------->DEAR3(1)     --------->RAP2.3(2)     --------->RRTF1(2)     --------->RAP2.3(3)    --------->RAP2.6(1)    <------NtERF2--------->DEAR3(1)    --------->ATERF1(1)    --------->DEAR4(2)    --------->ERF1<---------At4g35610    --------->ORA47(2)    --------->RAP2.3(1)    --------->RRTF1(1)                                            ----------->HVH21   ------>NtERF2<------NtERF2                                   <---------O2   <---------ATERF1(1)                                      --------->ATERF1(1)   <---------RAP2.3(1)                                     <---------ATERF1(1)                  <----  --------->DEAR3(1)                                       <---------SPL7               <---------ANAC55(2) ---------ATERF1(1)                                        ------>NtERF2                ----------->GT1 -------->CDC5 <---------RAP2.3(1)                        <---------ETT(2)           <------ZmHOX2a(2) ------>MYB46(3)--------->ATERF1(1)                       ----------->HVH21       --------->MYB46(3) -------MYB55(2)--------->RAP2.3(1)                       --------->ETT(2)  --------->ARR14(2)  <---- ----->ANAC46  <---------ATERF1(1)                        --------->DEAR3(1)<---------TCP20     <---- ----->ANAC58 <---------DEAR3(1)                         --------->ATERF1(1)<---------TCP16(1)  <---- ----->ANAC58--------->ATERF1(1)                        ------>NtERF2 --------->AtMYB61 <---------ANAC46 ->NtERF2--------->LBD16                                --------->LBD16--------->MYB52(1)    -------- ----ALFIN1<---------MYB46(3)                          <---------LBD16<---------ALFIN1------>ZmHOX2a(2) >LBD16<------NtERF2                                  <---------LBD16--------->MYB46(3) --------->ANAC55(2) -ETT(1)--------->DEAR3(1)                        <----------DOF2<-----------HVH21--------->DEAR3(1) >ANAC46<---------ANAC46                         <---------ICU4 --------->O2<---------ARR14(2)<------   cccagcgccgccgtggtcgccgctgctattactatctccatcgttctgtcatcttttccggcgaccgcgtgaccaccggttccaccgatcgcgtaattac  6530200                                               <------ZmHOX2a(1)                                            --------->HSFB2a(2)                                            <---------HSFB2a(2)                                       <---------ANAC58                                      ================HOX2a_HOX2a                                      ------>ZmHOX2a(2)                                      =============================HOX2a_HOX2a                                     <------ZmHOX2a(2)                                     ==============================HOX2a_HOX2a                                    --------->AGP1                               --------->TOE2(3)                           --------->DEAR3(1)--------->LBD16 --------->ARR14(2)    ----------->HVH21     <------NtERF2<---------ANAC58      <---------ARR14(2)              -------- -----YAB1               ------>NtERF2<-------TEIL          <------ZmHOX2a(1)          ------->TEIL -----ANAC58           ---------->ID1=================HOX2a_HOX2a                 ----------->RAV1(2) -----ANAC55(1) --------->ARR11(3)  <---------ARR14(2)   <------NtERF2       --------->AtMYB61 -----ANAC58    <---------ARR11(3)  --------->ARR14(2)  --------->LBD16      ------->GAMYB   <------- ->ICU4        <---------GLK1(1)  ----------->ARR10   <---------LBD16       --------->MYB46(3)    <-- -----GT1      <---------CCA1(2)<---------MYB52(1)<----------DOF2         <-----------GT1--------->TOE1(2)   gagtgtctgacttcttgatatcttcgtcgccatcgttagatccgttccaggactttgccggaggaatcgcctcgattaaccacagcctggaccttcgaga  6530300                           --------->ATHB12                                       <-------TEIL                    --------->ANAC58                                             --------->ARR14(1)                    --------->ANAC58                                             --------->GLK1(2)                   <---------ZAT18                                        --------->MYB52(1)                   --------->SPL7                                      <---------ANAC58                  --------->ALFIN1                                     --------->ANAC46                  <---------ATERF1(1)                                  <---------ANAC46                 <---------SPL7                                        --------->ANAC55(2)                <---------DEAR4(2)                                     <---------ANAC55(2)                <---------DEAR3(2)                                 <---------GLK1(1)           <-----          <---------ARR14(2)                                      <---------ARR14(2)          <------          --------->ARR14(2)                                      --------->ARR14(2)          ------- --------->ANAC58--------->ATERF1(1)                         --------->At4g35610 --------->CCA1(2)  - --------->ANAC58<------NtERF2                               <---------ZAT2     <---------ARR14(2) -- ->HSFB2a(2)    <---------ORA47(2)                           --------->ZAT2     <---------GLK1(2)  <- --HSFB2a(2)   <---------DEAR3(1)                  --------->MYB52(1)  <---------ANAC58   <---------At4g35610 ----ZmHOX2a(1)<---------DREB2C(2)   --------->ETT(2)        <---------At4g35610--------->ARR14(2) --   ggaccgcaagacgataggcggtgcgccattgatttgatttcgacagattagagaaacggattgagctggatttgcgtaacgagattcgattgagccgatc  6530400           --------->LBD16          --------->TOE2(2)          --------->TOE1(2)         --------->DEAR3(2)      ---------->DOF2     <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------MYB52(1)                                                                  <----------DOF2   <-------GAMYB                   <---------MYB46(3)                               ------->GAMYB   --------->At5g28300       <---------ZAT2                                       --------->At4g35610  ----------->GT1            <---------At4g35610                                  <---------At4g35610 <------NtERF2               --------->GLK1(1)                                    <---------ZAT2 -ZmHOX2a(2)                 --------->ZAT2                                   <-----------HVH21 ---ARR14(2)               <------NtERF2                                     <---------ANAC58 -->ARR14(2)             --------->ETT(1)                                    <---------ANAC46 ----->NtERF2            <---------DEAR3(1)                                  <---------ANAC58     <-- ------->ANAC46        <-----------HVH21                        --------->LBD16   --------->ZAT2  --- --------DEAR3(1)      <---------MYB52(1)                <-------TEIL    <---------GLK1(1)        <-- ------->DEAR3(1) <-----------GT1<-------GAMYB<---------ANAC46------>ZmHOX2a(2) <---------WRKY12  ---   gacgccgttaaaccggcgattaaccggtcggagctcgttgttgccatggtttgtacaggttcgatcgggagatggaattgcgtcaactggctttatactg  6530500                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     --------->ANAC55(2)      *TSS                                    <----------DOF2   <---------AHL20(2)                    ---------                             <---------ZAT18         --------->AHL20(2)                     ---------                            <---------ANAC46         <---------AHL20(1)   <-----------GT1   ---------                          <---------ANAC46           <---------AHL20(2)<---------CCA1(2) <---------ZAT18 -------bZIP60(1)       --------->ZAT14             --------->ICU4 <---------ANAC46      --------->ZAT18 ------>bZIP60(1)       <---------ZAT14        ----------->GT1  <----------DOF2    <----------DOF2 -------TGA2(1)         <---------At4g35610  ---------->DOF2<----------DOF2     <---------ARR11(3) ------>TGA2(1)   <----------DOF2   <---------------AGL15<-----------GT1  --------->YAB1 --------->ZAT14   acatcacaacgagactacctcttttgtgctgtgtgcttcttttagttgaaagtaatttttttctttctttcgcgtatcacaatttcttttgagcactcca  6530600                                                   ----------->GT1                                               ---------->DOF2                     <---------YAB1       ----------->GT1                    <---------AHL20(2)    --------->ALFIN1                      <---------ANAC58                    --------->AHL20(2)  <---------ANAC46                        <---------ANAC58 >ANAC58        ----------->GT1         <---------ANAC58               --------->YAB1 >ANAC58       <---------YAB1           <---------ANAC58    --------->TOE2(3)   <---------ANAC46 >ANAC46     ----------->GT1      <----------DOF2--------->DAG2   <---------ATHB12   tagctgtttagagaagtgtgattaaaatagcagaggcttttggggtgtcaaaagggtattttcgtcaaatgaataatagttttcgtgtattttcagatag  6530700                                                                                               ------                                                                                               ------              ----------->GT1                    <----------DOF2                               ------         <---------AHL20(2)                   ------>MYB83                                     <-----       <---------------AGL15                  ------>MYB46(1)                                  ------      <-----------------AGL3                --------->MYB46(3)                                 ------      <---------AHL20(2)                    <---------MYB59                            <-------------     --------->AHL20(2)                    --------->ANAC46                          >>>>>>>>>>WRKY6    <---------YAB1                       <---------WRKY18(1)                         >>>>>>>>>>WRKY11 --------->AHL20(2)               <-----------GT1<---------DAG2                     ----------->HVH21 --------->AHL20(1)     --------->ANAC58--------->WRKY12                            --------->WRKY12 <---------AHL20(1)     --------->ANAC58--------->WRKY38(1)                         --------->WRKY38(1) <---------AHL20(2)     --------->ANAC46----------->HVH21        <---------ANAC46 -------------------   tattttattatatatatggaaattcaacgtaacattgtaccattgacccaacttttttgatcatgttgtttgggctatttgactagttgacccaaaaacg  6530800      <---------MYB59 --->ANAC46                 --------->ANAC58 --->ANAC55(2)              --------->ANAC58                                                 ------>ZmHOX2a(1) --->ANAC55(1)         --------->At4g35610                                                ------>MYB83 ----ANAC55(2)   <---------ZAT14                                                          ------>MYB46(1) --->ANAC58   <---------ANAC58                                                         --------->MYB46(3) --->ANAC58   <---------ANAC46                             <------MYB46(1)    <---------At4g35610 ----AGL1     <---------ANAC58                             <------MYB83      <---------TOE2(3) ---->TaNAC69(2) --------->ZAT14   <---------ICU4     ----------->HVH21<---------YAB1<-----------GT1   taattgggcctaacttgtgtgtagtagccgaagcaaattatgtccatcttacataggtgataggtctcttatgctcattaagctaagaaaccatcctgcc  6530900                                                                                                 <---                                                                                                -----                                                                                     --------->TOE1(2)                                                                                    --------->At4g35610                                          <---------ANAC46                          <---------At4g35610                                          <---------ANAC58                          --------->ZAT2                 --------->ZAT6           <---------ANAC58<---------YAB1       --------->YAB1<-------                <---------YAB1 --------->ICU4     ------>ZmHOX2a(2)           <---------YAB1 <<<<<<<<     <-----------RAV1(1) <---------DEAR3(1)   <---------YAB1            <---------ARR11(3) <---------   aaaaaaactgttggaactatgactacgatggcgataattttggagcgtatgatcgagttgatgatagagaagtagatgttttgataagctgcgatttacc  6531000 -------DOF2 ---->TOE2(3) ----GT1                                                                              --------->ALFIN1 <GT-1                                         ------>ZmHOX2a(1)          ----------->GT1 -DOF2       <---------TOE2(2)                --------->TOE2(3)          --------->DAG2         -----   tttgaagaagagtcatatgttaagcagtagcgaagagagccatggtttccttactgactggatgctctccattgtaaggtgagaagatgtgttgacaatg  6531100  Previous    Next  AGI:  At5g19380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16866.1); contains domain Multidrug resistance efflux transporter EmrE (SSF103481) Range:  from: 6526827    to: 6530594    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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