Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->GLK1(1)                                           --------->CCA1(2)                                          --------->ARR14(2)                                   <--------ATHB1                                   --------->ATHB51           ------->GAMYB    --------->YAB1--------->ARR11(3)      --------->At5g28300    --------->GLK1(1)      <---------AHL20(2)  --------->ANAC46  --------->TOE2(3) -------->YAB1  --------->YAB1     <---------ICU4                ------->GAMYB ----ARR11(3)  <---------ATHB12   <---------ATHB51   <---------ZAT14        ------->MYC3           == --->ARR11(3)--------->WOX13(1)   <---------ATHB12   --------->ZAT14        <-------MYC3           <- >DOF2   -------->P    --------->AHL20(2) <---------ARR14(2)  --------->MYB52(1)------->TEIL     ----   aatcagaaatcaacccaatcagaaactaaataatcaataattcagatatacacagttcacagagcaacggtaatcgcacatgaattttgaagaaaaatca  6526300         ----------->GT1                                                             ------->TEIL        <---------TOE1(3)              ----------->ARR10                            <-----------GT1        <---------TOE2(3) --------->HSFB2a(2)                                     <---------REM1(1)      ---------->DOF2     <---------HSFB2a(2)                                    --------------->AtSPL8 =============================HOX2a_HOX2a                   <----------DOF2      <---------------AtSPL8 -----ZmHOX2a(2)       ------>ZmHOX2a(1)             --------->WRKY18(1)         <---------------AtSPL3 ----->At4g35610<-------TEIL  <---------GLK1(1)     <-----------HVH21          <-----------RAV1(1)   gatcagagtaaaggtaaattcgttcctactagaaatctgagaagatgctctcgcagtcaagtctttgatacagttcatgttttgttgtacctctcatttt  6526400                                                                        --------->LBD16                                                                     <---------At4g35610                                                                     --------->At4g35610                                                                     ------>NtERF2                                                                     <------NtERF2                                                                  --------->ATERF1(1)                                                       <---------ZAT14  ------>NtERF2                                                       --------->ZAT14 --------->DEAR3(1)                                                   <------NtERF2 <---------SPL7                     -                                           <---------ANAC46     <---------ANAC58                   --     <------NtERF2            --------->ANAC58   --------->ETT(1)<-----------HVH21                 --    --------->LBD16           --------->ANAC58   <---------DEAR3(1)--------->SPL7             -------   <---------LBD16           <---------LBD16 --------->ALFIN1   <---------ANAC58              <------   <---------ANAC46   --------->ARR14(2)   <---------ANAC58    <-------TEIL                   <------  <---------LBD16     <---------ARR14(2)   <---------ANAC58 --------->CCA1(2)                 -------   gagagccgggaaaccagagagtcgaatcgggcacggagaaggaatgcgtggtcggagtgaagagatgcgtccgccgagaaattgacgagaaaacttcgag  6526500                                                                                    --------->At4g35610                                                                                   --------->DEAR3(1)                                                                                  --------->MYB46(3)                                                                                  <------NtERF2                                                                                <---------ALFIN1                                                                                --------->AtMYB61                                                                                --------->DEAR3(1)                                                                               --------->MYB46(3)                                                                               <---------ABI4(2)                                                                               <------NtERF2                                                                               --------->ATERF1(1)                                                                              ------>NtERF2                                                                              <-----------HVH21                                                                              <---------ATERF1(1)                                                                             --------->ANAC46                                                                             --------->RAP2.3(3)                                                                             --------->ANAC58                                                                             --------->RRTF1(3)                                                                             --------->RRTF1(2)                                                                             --------->DREB2C(2)                                                                             <---------ATERF1(2)                                                                             --------->ANAC58                                                                             --------->DEAR3(1)                                                                             --------->ATERF1(2)                                                                            --------->RAP2.6(1)                                                                            --------->ATERF1(1)                                                                            --------->RRTF1(1)                                                                            <------NtERF2                                                                            --------->ORA47(2)                                                                           ------>NtERF2                                                                           <---------DREB2C(1)                                                                           --------->ABI4(1)                                                                           <---------ATERF1(1)                                                                           <---------DEAR4(2)                                                                           --------->At4g35610                                                                           <---------At4g35610                                                                          --------->RAP2.3(2)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                          --------->ANAC46                                                                          --------->RAP2.3(3)                                                                         --------->RAP2.6(1)                                                                         <------NtERF2                                                                         --------->ERF1                                                                         --------->ATERF1(1)                                                                         --------->RRTF1(1)                                                                         --------->ORA47(2)                                                                         --------->RAP2.3(1)                                                                        ------>NtERF2                                                                        <---------DEAR4(2)                                                                        <---------RAP2.3(1)                                                                        <---------ATERF1(1)                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58         --------->ALFIN1                                         ---------->DOF2------>NtERF2    ------->GAMYB                                            <---------DEAR3(1)--------->ERF1  ------>MYB83                                              --------->ATERF1(1)----------->HVH21    <  ------>MYB46(1)                                           <------NtERF2--------->DEAR4(2)        -- --------->MYB52(1)                                         <---------LBD16<---------RAP2.3(1)     <- -------->AtMYB61                                          <---------RAP2.3(1)--------->ABI4(1)   --- ------->MYB46(3)                                         <---------DEAR3(1)--------->RAP2.3(1)   <-- ------->DEAR3(2)                                        <---------At4g35610--------->ERF1        --- -->HSFB2a(2)                                 ---------->DOF2<---------ANAC46--------->RAP2.3(2) ---- ---HSFB2a(2)                              --------->HSFB2a(2) <------NtERF2--------->DEAR4(2)   <--- ---HSFC1(1)    <------ZmHOX2a(1)          <---------HSFB2a(2)--------->LBD16--------->RAP2.6(2) ---- -->HSFC1(1)  --------->ALFIN1    --------->ALFIN1    ---------->DOF2  <---------DEAR3(1) <---------At4g35610   aaccaacggagatggggaggagaggcgatagcgagagtgggagttatggaaagtcttagagcggcggagaaagacgccgccgccaccgctggagatgatg  6526600           <---------LBD16         <---------ARR14(2)        <---------GLK1(1)        --------->GLK1(1)  ------>NtERF2 --------->DEAR3(1) ------NtERF2 <-----------HVH21 ---->NtERF2 --------->LBD16 --------At4g35610 ------>ATERF1(2) -------ATERF1(2)                                                                  --------->ANAC58 ------>DEAR3(1)                                                                   --------->ANAC58 ----->ATERF1(1)                     <----------DOF2                            --------->MYB46(3)  - ------RAP2.6(2)         <---------ICU4                               <-----------GT1 ---------->DOF2 ----->RAP2.3(1)         --------->YAB1                  --------->ALFIN1     <-----------GT1       -   ccgccgagagagttccggtcactctaaacattatgggttcttttgggtaacgagtccaagtgtgagagaaatttacaagttaaccactcaaagaagactg  6526700                                                                                                  <--                                                                                              -------                                                                                             --------                           --------->ATHB12                                                  --------          <---------At4g35610         <---------ANAC46                                       --------        *TSS              --------->ICU4           <XXXXXXXXXXXXXXXXXXXXMIR2937             <-------- -------->YAB1  ------>ZmHOX2a(2)<---------ZAT6  <---------DAG2       <---------ZAT6      --------->ARR14(2) -------->AHL20(2)        <---------YAB1         <----------DOF2    --------->MYB52(2)    <---------ARR14(2)   aataatatgggcctctgatccacaaatactgattagtgttttgtgttcgaactttttcagtagtttttgttagtgtcatcaacttaaattcaaatccgca  6526800        <-------GAMYB                 <-------TEIL ----------CBF                 <---------WOX13(1) -->LBD16                    <---------ICU4          <-------TEIL                                 --- ->ANAC58                <---------YAB1          --------------->AtSPL8         --------->ANAC58 ---- ->ANAC58            --------->ARR11(3)--------->ANAC46       --------->At4g35610               ----- ->ANAC46 <---------ETT(2)   --------->ATHB12   ---------->DOF2               ---------->DOF2 <------ -LBD16 <---------At4g35610 <---------YAB1<---------ICU4      ------>ZmHOX2a(1) --------->ANAC58<----   aattgtatgctgttgacaaaaaatatgttgataattgatatacatcattacaaagtacattatcctctgcatagtttttgaaaagcaaaactgaaaacta  6526900    <----------DOF2                                   <-------MYC2 ------>MYB46(3)                                      ------->MYC2                       ----------->GT1 ---->P   ---------->DOF2--------->AHL20(2)           ------->MYC3                      <---------TOE2(3) ---->MYB52(1)           <---------AHL20(2)           <-------MYC3                  ------>MYB83 ---MYB52(2)            --------->AHL20(2)          ---------->TaMYB80              ------>MYB46(1) -------GT1             <---------AHL20(2)   ---------->DOF2                     ----------------->AGL3   accattcttttgtaaagaatgcataaaaaaatttcttatttgacaaaaaaagagcatatgctaagatgagaagagagaaggaaaccaaataatgttacaa  6527000                  <---------ANAC46                <----------DOF2               <---------MYB52(1)              ------>NtERF2            --------->ATHB12              <---------RAP2.6(3)     <---------YAB1             --------->RAP2.6(2)      --------->ICU4          ------>ZmHOX2a(1)        ----------->GT1        <---------ANAC58        --------->ALFIN1                          --------->YAB1        <---------ANAC58      --------->ALFIN1                          --------->ANAC58           --        ----------->RAV1(2)  <-----------HVH21       <---------ZAT6     --------->AtLEC2      <------      <-----------GT1   --------->ALFIN1             --------->ALFIN1   --------->ANAC58  ------>NtERF2   aaaccaattttcctgccgctatgtggatgggggtgaggggataattgaatcggaagtgttagtagatggtgtccaagcatatagaagcatgccgactaca  6527100                                                                 <---------ANAC58                                           --------->ANAC58      <---------ANAC58                                           --------->ANAC58      ----------->GT1                 ------->GAMYB             --------->ANAC46      <---------ANAC46         <---------ANAC58                 ------>NtERF2         <-----------------------TaNAC69(2)         <---------ANAC58       <---------ANAC46          <------MYB83  --------->ATHB12              <---------ZAT6       <---------AtMYB61 <---------YAB1 <---------MYB52(2)       <---------ALFIN1 <------MYB46(1)               --------->ZAT18 ------->YAB1   --------->MYB46(3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ZAT14 ---REM1(2)   ----------->RAV1(1)   <---------At4g35610 <--------P          --------->ZAT14   aggatgattgtgcctgcaacaaacccccttggtagtgtagatgccaccccaaggtatggtaggggaagcgtgaaacagtacaccgctatgggcactgcat  6527200  Previous    Next  AGI:  At5g19370.1    Description:  rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein. similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.2); similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16868.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, PpiC-type; (InterPro:IPR000297); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 6524122    to: 6526708    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g19380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16866.1); contains domain Multidrug resistance efflux transporter EmrE (SSF103481) Range:  from: 6526827    to: 6530594    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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