Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC58                               --------->ANAC58                               --------->ANAC46                              --------->LBD16                           ------>MYB83                         --------->DEAR3(1)                         --------->AtMYB61                                --------->ANAC58                        --------->At4g35610                               --------->ANAC58                        <---------At4g35610                          ------>ZmHOX2a(1)                     ------->GAMYB---------->DOF2                <---------ARR14(2)                    <---------MYB52(2)                        <---------ANAC58    ---------->DOF2   -                 --------->MYB46(3)                    --------->ANAC46   --------->ANAC46          <           <-----------HVH21  <---------LBD16       --------->ZAT18 --------->TOE2(3)--------->At4g35610          ------>ZmHOX2a(1)------>MYB46(1)       ------>MYB46(1) --------->ARR14(2)  <---------At4g35610 -------DOF2 <---------ETT(2)--------->LBD16     ------>MYB83 <---------ANAC58  <----------DOF2------   tttgcgataatcctgtcgaacaactcacctcccgcgcaaagctccataaccaaatgcacagaatgcttatcctcatacgctcctttaagctccacaatgt  6523400            --------->ANAC55(2)          <---------WRKY38(1)    ------>MYB46(1)          <---------WRKY12     <---------ALFIN1         --------->WRKY18(1)   --------->AtMYB61        <-----------HVH21     --------->At4g35610   <---------WRKY18(1)        <---------At4g35610  ----------->HVH21          ------->TEIL                                                     -------  --------->WRKY12          <---------ALFIN1              <----------DOF2  <----------DOF2    ------- -------->At4g35610    --------->GLK1(2)       ------>ZmHOX2a(1)     --------->At4g35610  --------->AtLEC2 ---------At4g35610--------->YAB1------>MYB83 --------->TOE2(3)      --------->ZAT2   --------->ARR11(3) --->ATHB12 <---------ANAC55(2)--------->DEAR3(1)   <---------ARR11(3)     ==========================   ttggctgaccggtcaagtgatgcataatctgcacctcccttctcacatcctcaatgtcttctttgttcacgagcttccttttagcaatggtcttgcaagc  6523500                <----------DOF2               <---------DAG2          <-------PIF5         <---------O2<---------ANAC46         ==================bZIP_DOF                             ------>ZmHOX2a(1)         <---------TGA1a                                   <---------ZAT2         --------->TGA1a--------->ZAT14                   ------>MYB46(1)         --------->O2<---------ANAC58 --------->ANAC58    ------>MYB83     ------>NtERF2   <---------ANAC58 --------->ANAC58  <---------MYB59     <---------At4g35610<---------ZAT14             --------->ANAC58                 <----------DOF2< -->ANAC58------->PIF5  --------->REM1(2)           --------->ANAC46       ------->TEIL            <- -->ANAC58--------->LBD16         <-----------HVH21 --------->ANAC58     <<<<<<<<<EIN3            <-- ==================bZIP_DOF  --------->CCA1(2)   <---------ETT(2)   --------->MYB46(3) <-----------GT1   gaattgcagccccgtggccttttgcgtgcagagatgagtcaccccaaactgtccacgacctagctccttacccaatgtatatgagctctttacatcttcc  6523600                                                             <-------GAMYB                          <                                                             <------NtERF2                         --                                                           <---------ANAC58                        --                                                           <---------ANAC46                        --                                                          <------NtERF2                           ---                                           <------ZmHOX2a(1)<---------MYB46(3)                   ----                                    <---------ANAC58      <---------LBD16                       <----                                    <---------ANAC58     ------>NtERF2                          -----                                    <-------GAMYB      <---------ANAC58                        ------                                   <------MYB46(1)     <---------ANAC58                     <--------                                   <------MYB83    --------->GLK1(1)                        <--------                                   <---------MYB46(3)--------->GLK1(2)                      ---------                                  <---------AtMYB61<---------GLK1(1)                       --------->ANAC46     <------NtERF2                --------->MYB59 ----------->ARR10                       <---------At4g35610   --------->ETT(2)          ------>ZmHOX2a(1)   <------ZmHOX2a(1)                        --------->At4g35610 ---------MYB46(3)          <---------ANAC58  <------ZmHOX2a(1)                         ---------->CDC5 --------AtMYB61            <---------ANAC58--------->ALFIN1--------->MYB55(2)        <-----------HVH21 -------MYB52(1)    ------>ZmHOX2a(1)   <-----------RAV1(2)<---------ANAC58 ----------->HVH21<------NtERF2   attggtcgccctaagacaggtcctattggtccttgtttggttgcaggaggaggagatgctggcgggtgtttagaagctctaacagaggcttcagcggcac  6523700        <------NtERF2        --------->RAP2.3(1)       ------>NtERF2       --------->ABI4(1)       <---------ATERF1(1)      --------->RAP2.6(2)      --------->RAP2.3(3)      <---------ALFIN1      --------->RAP2.3(2)      --------->DREB2C(2)      --------->RRTF1(3)      --------->ATERF1(2)      --------->RRTF1(2)      --------->DEAR3(1)      <---------ATERF1(2)     --------->RAP2.3(1)     --------->ERF1     --------->DEAR4(2)     --------->ORA47(2)     --------->RRTF1(1)     --------->ATERF1(1)    ------>NtERF2    <---------ATERF1(1)    --------->ABI4(1)   --------->ANAC46   --------->DEAR3(1) ---------ALFIN1 ------>P ------>NtERF2 ---->MYB83                                                                              --------->MYB52(1) ---->MYB46(1)                                                                       --------------->AGL15 -------->RAV1(1)       <------NtERF2       --------->At4g35610                    ------------>CBF ----->AtMYB61       ------>NtERF2          <---------At4g35610                <-----------RAV1(1) --NtERF2--------->DEAR3(1) <---------ARR14(2)                             <---------------AGL15 ---->MYB46(3)      ------>NtERF2 <----------DOF2------->TEIL              ==========================MADS_MADS >NtERF2--------->ATERF1(1) --------->ARR14(2)  <---------GLK1(2)          --------------->AGL15 -ATERF1(1)         --------->LBD16         ----------->RAV1(2)           <-----------------AGL1 -RAP2.3(1)        <---------RAP2.6(2)   <---------YAB1                   >>>>>>>>>>>>>>>>>LFY     <- >RAP2.6(2)       <---------LBD16 --------------------->WRI1      ----------->RAV1(1)<---------------AGL15   caacaccgccgcctccattttccggcctcggttcttctttgttatcatctgaatctcttccatgagagcaacaatttcccattgttgcaattaaggggag  6523800                                                 <----------DOF2                                                =================HOX2a_HOX2a                                               ==================HOX2a_HOX2a                                               <---------RVE1(1)                                               <------ZmHOX2a(2)                                              --------->ARR14(2)                                              <---------ARR11(3)                                              --------->ARR14(3)                                              --------->ARR11(3)                                              <---------ARR14(2)                                              <-----------ARR10                                              <---------ARR14(3)                                             --------->RVE1(1)                                          ---------->DOF2                        ----------->GT1 <---------YAB1               -------->P            --------->AHL20(1)         <---------ARR11(3)       --------->AHL20(2)         --------->ARR11(3)   --------->AHL20(2)------>ZmHOX2a(2)        <---------TOE1(3)       ----     ---------->DOF2==================================HOX2a_HOX2a        <---------TOE2(3)       ---- ----------->GT1    <------ZmHOX2a(1)<---------AHL20(1)   ------>ZmHOX2a(1)                      ---- -----ZmHOX2a(1)    ===================================HOX2a_HOX2a   <----------DOF2      <----------DOF2   aggaagtaaaagttctcaaccaggaagagaaataaaaaaaatattaaagatcttttcttcctctgtctgttcttttaggtttttggtttcttctttagca  6523900                                                                                                    -                                                                             ------>NtERF2          -                                                                           <---------ANAC58        <-        <------ZmHOX2a(1)        <---------YAB1                            <---------ANAC58        -- ------->GT1      <---------ANAC58                                        <---------At4g35610    <--- ----->ANAC58     <---------ANAC46                                 ---------->ID1                ---- ----->ANAC58     <---------ANAC58           <-----------GT1      <-----------GT1             -------   agaaaaattaggagttttttgcttatgaaatggctatgagtagcatttttctgtttttgtaagttttttttcgttttgctggccttcaagttcaaacgat  6524000   ------>ZmHOX2a(2)                                                                                <   <---------LBD16                                                                          ------>ZmHOX2a(1)   ======================HOX2a_HOX2a                                                        --------- ------->HAHB4                                                                             <---------LBD16 -------->ATHB12                                              <------ZmHOX2a(1)           <---------ANAC46 --------YAB1                                               <---------TOE2(3)           <---------ARR14(2) ------->ICU4                                           <---------YAB1                 <---------GLK1(1) ------ICU4             ---------->DOF2               <---------AHL20(2)               --------->GLK1(1) ----->YAB1       <------ZmHOX2a(1)                   --------->AHL20(2)   --------->DAG2 ----------- -->TOE2(3)  <----------DOF2                         <---------AHL20(2)  ---------->DOF2--------->ARR14(2)   aatgatcgggagggactttaggaaccaaaagcagcctgtctctgtatttttgttatttattttaggatttagtacaaaaggttgagagcatttcctggag  6524100             <---------ANAC58             <---------ANAC58                                                                <-------             <---------ANAC46                                    <---------AHL20(2)          --------     <---------ANAC55(2)                                 --------->TOE1(3)                   <-------     --------->ANAC55(2)                                 --------->TOE2(3)           ------->TEIL ---------AHL20(2)                                     ------->TEIL     <---------AHL20(2)  <-------- >LBD16  <---------ANAC58                             <-----------GT1----------->GT1 --------->ARR14(2) >RAV1(2)<---------ANAC58                <---------GLK1(2)      --------->AHL20(2)   <---------ARR14(2)   aattaatacggacttgcctgtaatattctaaatttgttatctatattctcaaaaatgaaccttatattatatagtttattgaatacgaatttgcaaatct  6524200                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58               --------->CCA1(2)                                        --------->TOE2(3)              <---------ARR14(2)                                    <---------WRKY12      --------->ICU4   ---------->DOF2                              <---------WRKY38(1) --ARR14(2)   --------->ARR14(2)                                   --------->WRKY18(1)          ----- ->GLK1(2)   <------ZmHOX2a(1)                                  <---------MYB46(3)        ---------->ARF1 ----ARR10  ----------->GT1        <---------GLK1(2)         --------->ATHB12             <---------CCA1(2) -CCA1(2) <------ZmHOX2a(1)      ----------->ARR10      <------ZmHOX2a(1)        <---------KAN4(2)   aatttggaattaggaggatacaagaaaaagagactaagatgctcaatttcagtaagtaggaattgatgggtcaaccttgagagaataagcttgtatccca  6524300  Previous    Next  AGI:  At5g19360.1    Description:  CPK34 (calcium-dependent protein kinase 34); calmodulin-dependent protein kinase/ kinase. similar to CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G23650.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK17 (calcium-dependent protein kinase 17), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62888.1); similar to calcium-dependent protein kinase 17 [Nicotiana plumbagi Range:  from: 6521718    to: 6523782    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g19370.1    Description:  rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein. similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.2); similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16868.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, PpiC-type; (InterPro:IPR000297); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 6524122    to: 6526708    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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