Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------AtLEC2            <-------TEIL         <---------ANAC58         <---------ANAC58         <---------ANAC46                                            <---------AHL20(2)        <-------TEIL                                           <---------TOE1(3)     <---------ANAC58                                          <---------TOE2(3)     <---------ANAC58                                         <---------DOF5.7(2)           <--------    <-----------RAV1(1)                                       --------->MYB52(1)            --------- --------->GLK1(2)          ----------->GT1                 --------->DOF5.7(2)      <---------ANAC46 ---------ARR11(3)         --------->ANAC58                <-------GAMYB          <-----------RAV1(1) -------->ARR11(3)         --------->ANAC58               <---------MYB46(3)     <---------TOE2(3)   gagattttggtgcgtgcatgaaatggagcaaggtatcaaatccattttttgttttagagatggttaacgattttttttgtataaatgttgtgcaaatcca  6518400                       <---------ANAC55(2)             --------->TOE2(3)             --------->TOE1(3)           -------->P --------------->AtSPL8         --------->AtMYB61         <---------MYB59        --------->DEAR3(2)                                              <---------ANAC58        <---------MYB55(2)                                         <---------ICU4        --------->MYB46(3)                                        <---------YAB1    --------->TOE2(3)   --------------->AtSPL3     --------->STY1(2)                   --------->ICU4 ----------->RAV1(1) -ARR14(2) ------>MYB46(1)    <---------STY1(2)                 --------->YAB1  --------->REM1(1)   - >ARR14(2) ------>MYB83--------->ANAC55(2)            <-----------HVH21 <---------ANAC58            <   caatagccgaaccaaccttcatgttatgtactagctagtttggactagttttgccctgtctcatagtcatcatggcttcactacaacataaaccctatcc  6518500                                                              ----------->GT1            --------->ANAC46                       --------->ANAC46   <---------TOE2(3)                               --------->ANAC58 -------->ARR11(3)                                 --------->ANAC58 ---------ARR11(3)                         <-------TEIL     <---------ANAC46         <---------ARR11(3)   aagataatgttttcactcaaacaacttgatagtcacatactcacattcattccaagaaaacgatgtgtaacaaatcgctaaaaacaatatgttttgtcat  6518600                                       --------->REM1(2)                                       --------->ZAT14                                    <---------ANAC46                                    <---------ANAC58                                    <---------ANAC58                                                <                            <---------WOX13(1)                                                      -                            <--------P <---------ZAT14                                       --------                          <---------MYB46(3)                                         <-----------GT1-                          ----------->GT1                                            --------->MYB52(1)                         <---------AtMYB61                                        --------->YAB1-----      ------->TEIL       --------->ALFIN1        <-----------GT1             ----------->GT1---------   cacatatgtattttggaatttcatcgagtggttgatagccgtgtacaaatttttcttcatagcgaagtcgattacaaaaatgaaaaataacgaaataatc  6518700                                                                                        <------NtERF2                                                            <---------TOE2(3)         <---------ANAC58                                                           ---------->DOF2            <---------ANAC46                                                          <---------AHL20(2)          <---------ANAC58     <---------AHL20(2)                               --------->AHL20(2)             ---------->ID1     --------->AHL20(2)                               <---------AHL20(1)       <---------AHL20(2)   <----------DOF2                                    --------->AHL20(1)      <---------AHL20(1) ---------ARR11(3)          <---------AHL20(2)        <---------AHL20(2)      --------->AHL20(1) -------->ARR11(3) --------->ATHB12                --------->YAB1             --------->AHL20(2) ->YAB1           --------->AHL20(2)             --------->AHL20(2)           <---------AHL20(2) -------->GLK1(2) <---------AHL20(2)            --------->YAB1               --------->AHL20(2) ---->YAB1      --------->TOE2(3)             --------->AHL20(2)          --------->AHL20(2)--------- >ICU4        <-------TEIL  <---------YAB1 --------->YAB1 --------->AHL20(2) <---------AHL20(2)   aaaatcttttattagtttcattaattgagttttattgaaactcaattttaaaataataaattaaagaaaatcaccataaattaatttggcgtctataaac  6518800                                                                                  <---------WOX13(1)                                                                                <--------ATHB1                                                                                --------->ATHB12                                                                                -------->HAHB4                                                                                --------->ATHB51                  <---------DAG2                                                <---------ICU4                  <----------DOF2                                              --------->ICU4           <---------AHL20(1)                                                  <---------ATHB51     <           <---------AHL20(2)                                                  <---------AHL20(2)   <           --------->AHL20(1)                                                  <---------YAB1      <-           --------->AHL20(2)                                                --------->YAB1    ------          --------->AHL20(2)                                               --------->AHL20(2)<-------      <---------AHL20(2)                *TSS                 --------->AHL20(2)--------->AHL20(2)<---      --------->AHL20(2)       <---------ANAC58          ------>ZmHOX2a(1)--------->YAB1     <-------     --------->AHL20(2)        <---------ANAC58         --------->TOE2(3)--------->AHL20(2) <-------- -->TBP   <---------AHL20(2)   <---------ANAC46      <---------ARR11(3)--------->YAB1 <---------WOX13(1)   agagaaattaaaataaattcctttttctaaatttcgtttacatcgaattacccaaaatcctaaaaatatacaaaaataaaaataattgatagaccggtcg  6518900                            <---------TOE2(2)                         <---------TGA1a                         --------->O2                         <---------ANAC58                         <---------O2                                                               -                         --------->TGA1a                                                            -                         <---------ANAC46                                                           -                         <---------ANAC58                                                           -                      <---------ANAC46                <------NtERF2                                 -                  <-----------HVH21                  ------>NtERF2                                  -                --------->MYB46(3)                   ----------->RAV1(1)                            -              <---------ARR14(2)                    <------NtERF2                                  --              --------->ARR14(2)                    --------->ANAC58                               --             ------>NtERF2  <---------TOE1(2)       --------->ANAC58                               <-             <---------RAP2.6(3)                    --------->ANAC46                               --            ----------->HVH21                      <---------ZAT18                                 <-          --------->At4g35610                     <---------ANAC58                                 <-       <---------ANAC58 <------NtERF2        --------->ARR14(2)                                   --- ---------CCA1(1)--------->O2                <---------ARR14(2)                                 ----- ---------RVE1(1)--------->ANAC46         --------->ANAC55(2)                                   ----- --------ARR11(3)<---------O2            <---------TOE1(3)   ----------->GT1                    <---- --->ETT(1) --------->DEAR3(1)           <---------TOE2(3) <---------ZAT14                    <------ --MYB52(1)--------->DEAR3(2)     <---------TOE2(3)------>NtERF2                             ------>ZmHOX2a(1) ---NtERF2<---------At4g35610     <---------TOE1(3)--------->ZAT18                       ------->TEIL ----HVH21<---------ATERF1(1)     --------->MYB59 <---------ANAC58                 --------->ICU4---- -SPL7 <---------ANAC58<-----------HVH21<-----------GT1    --------->ZAT14   <---------DEAR3(1)------   ggatatttggcgagccgacccgtcgcgtcgtgggtttaggtttaacgtattggcgcgccagtgaagaaaatagacgacgatggcgatgatgcatcctccg  6519000        --------->ANAC58        --------->ANAC58     <------NtERF2     ------>NtERF2    --------->RRTF1(3)    --------->ANAC46    --------->RAP2.6(2)    --------->RRTF1(2)    --------->DEAR3(1)    --------->RAP2.3(3)    --------->RAP2.3(2)   --------->ERF1   --------->RRTF1(1)   --------->RAP2.3(1)   <------NtERF2   --------->ATERF1(1)  ------>NtERF2  <---------ATERF1(1)  --------->At4g35610 --------->DEAR3(1) --------->ATERF1(2) --------->RAP2.3(2) <---------ATERF1(2) --------->RAP2.3(3) --------->RAP2.6(2) --------->ANAC46 ------->GAMYB -------->ERF1 -------->RAP2.6(1) -------->ATERF1(1) -------->RRTF1(1) -------->RAP2.3(1) -------->MYB46(3) -------->DEAR3(2) ------->ZAT2 ---->NtERF2 --------ATERF1(1) ------->At4g35610 --------ZAT2 --------At4g35610 ------>DEAR3(1)                                                                             <------- ---->At4g35610           ------>ZmHOX2a(1)                 ----------->GT1               <---------- ---->LBD16              --------->TOE2(3)                  <------MYB46(1)     <---------WRKY38(1) -----At4g35610        ------>MYB46(1)                      <------MYB83        <---------DEAR3(1) ---LBD16              ------>MYB83                        <---------AtMYB61    <---------WRKY12 ----->ERF1       --------->YAB1                           <---------MYB46(3)   --------->ETT(2) --->ANAC46    ------>ZmHOX2a(1)                          <---------WOX13(1)    <---------ETT(2)   cagccgccgcaaggctcctatcaccatcctcagacgctcgaagaagttcgaactctttggattggtgatttgcagtactgggtcgacgaaaattacctca  6519100                                                    <----------DOF2                                                  --------->ZAT2                                                  <---------At4g35610                       ---------                --------->TOE2(2)                 --------->At4g35610                       <--------                --------->TOE1(2)                 <---------ZAT2                            <--------  ------>ZmHOX2a(1)                            ------>ZmHOX2a(1)       <----------DOF2      --------- --MYB59       --------->DEAR3(2)             --------->TOE2(3)    ----------->HVH21     <---------At5g28300 -GT1    <-----------------AGL1       <----------DOF2       ---------->DOF2             <-----------GT1   cttcctgcttctcccaaaccggcgaggtatctcttcacctctttgtttcctcagctttctctaaaagctgtgactttgtcaatttccaattcacagctct  6519200       <---------TOE1(2)                                                 <---------ANAC46     <---------LBD16                     --------->At5g28300             <---------ANAC58     --------------------->WRI1         ----------->GT1                  <---------ANAC58    ----------->RAV1(2)   <------ZmHOX2a(1)                      <---------TOE1(3)         --------->ATHB12 >At4g35610     --------->ANAC46    --------->DAG2     <---------LBD16 <------MYB83      <----------DOF2 -At4g35610  --------->KAN4(2)     ---------->DOF2    <---------LBD16  <------MYB46(1)   <---------DAG2 -ZAT2--------->LBD16  --------->HSFB2a(2)          <----------DOF2  <--------P     <---------ANAC58 >ZAT2------>ZmHOX2a(1)<---------HSFB2a(2)       <-----------GT1 <---------TOE2(3)  <---------ANAC58   ccattttcctgggtttattcgccatctaggaacaagataaagcagtgaattttactttcgggattttaagggttggcttatatttctcgtgctttattga  6519300  Previous    Next  AGI:  At5g19350.1    Description:  RNA-binding protein 45 (RBP45), putative. similar to ATRBP45A (RNA-BINDING PROTEIN 45A), RNA binding [Arabidopsis thaliana] (TAIR:AT5G54900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21922.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 6518840    to: 6521476    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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