Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ------>NtERF2                                      <---------LBD16                                     <---------ANAC46                                     <---------ANAC58                          ------->GAMYB                       --------->MYB52(1)      <---------ANAC46                      ------->GAMYB  <---------ANAC58                      --------->MYB55(1)  <---------ANAC46                     <---------MYB111(1) ------>NtERF2                     <---------MYB55(2)  <------NtERF2                     <---------MYB52(2)--------->ATERF1(1)                     --------->MYB46(3)<------NtERF2                                           ------                     <---------MYB46(2)<---------DEAR3(1)                                      ------                --------->ANAC58  <---------DEAR3(1)                                     --------->MYB52(1)                --------->ANAC58  ---------->CDC5                                     --------->YAB1<              ---------->DOF2   <---------ANAC58        ---------->DOF2        --------->AtMYB61   --           ------->GAMYB--------->RAP2.6(3)<----------DOF2             ------>ZmHOX2a(1)--------->ICU4        ----------->RAV1(1)     <---------ANAC58       <------ZmHOX2a(1)    <---------ALFIN1   ------   ggaaattttgcaacagagaagcaactaacggcaggcttggcgcggcgttttgtgagaggaaagagtcgagttcctgctccacctccaagaataatggaag  6466400                                                                               --------->ZAT18                                                                               <---------ZAT18          --------->ARR14(2)                                                 --------->ANAC58          <---------ARR14(2)                    <---------MYB46(3)           --------->ANAC58       <---------TOE1(2)                        --------->MYB55(2)           --------->ANAC46      =============HOX2a_HOX2a                 <---------AtMYB61          --------->ZAT14      ------>ZmHOX2a(1)                        --------->ALFIN1           <---------ZAT14 ------->GAMYB <----------DOF2              <---------AtMYB61            --------->ALFIN1 --->ANAC58    <---------DAG2           <---------LBD16              --------->ZAT14         <------- --->ANAC58 ------>ZmHOX2a(2)          ----------->RAV1(2)        ---------->DOF2            <------- ------------AtMYB77                  ------->TEIL               <---------AHL20(2)    --------->ATHB12 ------->At4g35610             <---------ARR11(3) <---------WOX13(1) <---------ZAT14  <---------YAB1 --->ANAC46<------ZmHOX2a(2)   --------->ARR11(3)<-------GAMYB  --------->AHL20(2) <----------DOF2   caactgtccttggatcccttttctcagtctcaagttcttgtacctggaggtggttgacataaacaaattaatgcagtgcagggcacttttgattagcttg  6466500                                                           --------->At4g35610                                                           <---------At4g35610                              ----------->GT1              --------->ZAT2                    <---------ARR14(2)                     <---------ZAT2                 --------->At4g35610        --------->YAB1       --------->DAG2             --------->LBD16                   <---------At4g35610 --------->GLK1(2)  --------->ARR14(2)        --------->TOE2(3)                  <---------YAB1 --ANAC58       --------->At4g35610           <---------MYB59  --------->REM1(1)--------->AHL20(2) --ANAC58  --------->YAB1  ---------->DOF2 <-----------GT1--------->ANAC46      <---------AHL20(2)   aagaatcgaagaataagaagcagaaccagaaaaggttgaaacttgttaccttactctccccagctacactatttagagacattaaaattctcttctgaga  6466600                                                                              <---------HSFB2a(1)                                                                              --------->HSFC1(2)                                                                              --------->ZAT2                                                                              --------->At4g35610                                                                              --------->HSFB2a(1)                                                                              <---------At4g35610                                                                              <---------HSFC1(2)                                                                             --------->GLK1(2)                                                                           <---------At4g35610                                <---------ZAT2                      --------->ATHB12                        --------->ATHB12                            <---------ICU4                      ------->TEIL                              --------->ZAT18            <------ZmHOX2a(2)   <---------At4g35610           --------->At4g35610      --------->TOE2(3)           --------->ARR11(3)   --------->At4g35610           <---------At4g35610      --------->YAB1           <---------ARR11(3)   --------->ZAT2 <---------At4g35610 <---------YAB1------>NtERF2 ------   gaagttagtagaagatcgaagacgaatgtttggaagctgagacaagttgagcttcttccccatgagctcaccattgcagaagctgccaagcttaatgtgc  6466700                                                            --------->ZAT2                                                            <---------At4g35610                                                            <---------ZAT2                                                            --------->At4g35610                                                     --------->At4g35610                                                     <---------At4g35610                                                     --------->ZAT14                                                 --------->ARR14(2)                             --------->ZAT2      --------->GLK1(2)                     <---------GLK1(2)                             <---------ZAT2      <---------ARR14(2)                ---------->DOF2                     --------->ANAC55(2)        --------->ARR14(2)                <------ZmHOX2a(1)                     <---------ANAC55(2)       <---------HSFB2a(1)               --------->ANAC58              <---------At4g35610              --------->HSFB2a(1)               --------->ANAC58          --------->ALFIN1   <---------At4g35610<---------ARR14(2)              <---------TOE1(2)         --------->LBD16     --------->At4g35610<---------GLK1(2)               <---------TOE2(2)   --------->WOX13(1)<---------ANAC46  <------NtERF2 <---------ZAT14--------->AtMYB61--------->ICU4 ->TEIL <---------ANAC46    ------->TEIL      ----------->ARR10 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ctagtcaatcccgtggagctactacgtatgcagctaggggcagagagggagattctgcagtcagcagagaccaccattttcgcaggaaagattgtctctt  6466800                                                                                            ---------                                                                                        --------->ANAC46                                                                                      <---------ALFIN1                                                                                     <---------WRKY38(1)                                                                                     <---------ZAT18                                                                                  <------MYB83                                                                                  <------MYB46(1)                                                                                 --------->MYB59                                                  <------------CBF            <---------ARR14(2)                       ---------->DOF2      <---------ANAC58                  --------->ARR14(2)                     --------->CCA1(2)      <---------ANAC46                 <------ZmHOX2a(1)-------                  ----------->GT1           <---------ANAC58           <---------HSFB2a(2)  <--------            --------->ALFIN1     *TSS       <---------AtLEC2           --------->HSFB2a(2) <---------CCA1(2)   gaagggtttgaagagaggggaagataaaagagaagagaagagagttgcatggaattgcattttagttgattttttggaaggatttggtccaccctatctt  6466900                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                       --------->KAN4(2)               ----------->RAV1(1)                                         --------->AtLEC2   <-----------HVH21                                                     <---------ANAC58  --------->ANAC58                                                       <---------ANAC46     <------  --------->ANAC58                                               ----------->HVH21    <---------KAN4(1)  --------->ANAC46        <---------AHL20(2)                   <---------ANAC58       --------->KAN4(1) >ARR14(2)    --------->AtMYB61                                <---------ANAC58       <----------TaMYB80 -->YAB1   --------->ANAC46             <---------GLK1(2)<----------DOF2 <---------ANAC58     ------- -ARR14(2)<-------TEIL   <---------AHL20(2)     --------->ARR11(3)<---------WRKY18(1)---------->TaMYB80   catcaagtcacatacaccaccagtttttttattttgtattcagattttaagacattgctcttttgtcttgacctgtcttgcaaatggcatattctactgg  6467000                                                                                        <---------AHL20(2)                                                                                       --------->AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                                      --------->YAB1                                                                                 >>>>>>>>>>ABI3         --------->AtLEC2                                                        >>>>>>>>>>FUS3         --------->ANAC58                                                       --------->ANAC58         --------->ANAC58                                                       --------->AtLEC2        --------->WOX13(1)                                                      --------->ANAC58     <-----------HVH21                                                          --------->ANAC46 ---HSFB2a(2)                       --------->ATHB12                    <---------CCA1(2) -->HSFB2a(2)            ---------->DOF2                                ------>ZmHOX2a(1)  <---------YAB1   aaacttatgtcaagcaaattcaaaattgaaagagaaattgatttcttagaatatactttcgccattttagtttcctatctccatgcaaatataatcaatg  6467100                                                                       <----------DOF2                                                                  <---------AHL20(2)                                                               <---------AHL20(1)                                                               --------->AHL20(1)              ------             ----------->GT1                                  --------->AHL20(2)             <-------           ---------->DOF2                                  --------->AHL20(2)            <---------AHL20(2)    <---------ANAC46                                      --------->AHL20(2)              --------->AHL20(1)    <---------REM1(1)             <---------At4g35610  --------->HSFB2a(2)                --------->AHL20(2) <---------AtMYB61                --------->At4g35610  <---------HSFB2a(2)               --------->AHL20(2)   gagatggtgtaagaaaagaaaaaattcaagtttttttgctgaatcaattttgtatttctaaaaaatatataatctttttttttcactggaattttattaa  6467200                                                                                ---------->DOF2                                                                    --------->LBD16                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR14(2)                                                         ===============HOX2a_HOX2a      --------->RAP2.6(3)                                                         <------ZmHOX2a(1)    ------->GAMYB                                                         ================HOX2a_HOX2a ---------->DOF2      <---------ATHB12                                  --------->ANAC58    <---------LBD16     ------>MYB83                                       --------->ANAC46   --------->MYB52(1)  ------     ------>MYB46(1)                             <---------------AGL15     <-----------GT1     ------ >>>>>>>>>>MYB80                                 <----------DOF2--------->ARR11(3)--------->ANAC58 --->WOX13(1)                              ---------->DOF2      --------->ARR14(2)--------->ANAC58 --YAB1         ---------->DOF2  <---------GLK1(2)      --------->ANAC58 <---------AHL20(2) <------NtERF2   tcaaaccaaacatgtttacaaagcctgataaaccagaaacttagccaaagactttaacaggaaacagatcccgattttaacggaaagcaaagtcggcaaa  6467300  Previous    Next  AGI:  At5g19220.1    Description:  ADG2 (ADPG PYROPHOSPHORYLASE 2); glucose-1-phosphate adenylyltransferase. Identical to Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplast precursor (ADG2) [Arabidopsis Thaliana] (GB:P55229;GB:O04929;GB:Q9SXS1); similar to APL2 (large subunit of AGP 2) [Arabidopsis thaliana] (TAIR:AT1G27680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71117.1); similar to ADP-glucose pyrophosphorylase [Cicer arietinum] (GB:AAK27718.1); similar to ADP-glucose pyrophosphorylase large subunit [Brassica rapa subsp. pekinensis] (GB:AAK27685.1); contains InterPro domain ADP-glucose pyrophosphorylase, conserved site; (InterPro:IPR Range:  from: 6463826    to: 6466833    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g19221.1    Description:  other RNA Range:  from: 6464236    to: 6466351    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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