Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                        --------->LBD16                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                       <---------ANAC55(1)                                                                                      <--------------          <----------DOF2                                                           --------->AGP1         ------>ZmHOX2a(2)                                                          --------->ARR14(2)        <------ZmHOX2a(2)                                            --------->ANAC58 ------>ZmHOX2a(2)       <---------ARR14(2)                                            --------->ANAC46 <-------TEIL       <-----------ARR10                                             --------->ANAC58<------ZmHOX2a(2)       --------->ARR11(3)                                       --------->ANAC46    <---------ARR11(3)       <---------ARR11(3)                            <----------DOF2--------->LBD16 <---------ARR14(2)       --------->ARR14(2)                          --------------->AGL15           <---------GLK1(1)      <------ZmHOX2a(1)                            ================================================== --------ATHB12                          --------->ANAC46<---------------AtSPL8    --------->GLK1(1)< ---->RAV1(1)                            --------->AtLEC2--------------->AtSPL8 --------->ANAC46-----   aatgaataggatctttggcagtagttttgtttgcacaaactccatgccaaaatcccttttgagtacaatccacgaaacattcacgagatccgtattcgcc  6448300                                                    ------>MYB46(1)                                                    ------>MYB83                       --------->YAB1             --------->AtMYB61                      <---------YAB1            ------->TEIL                     <---------ARR11(3)        <---------ALFIN1                     --------->ARR11(3)       --------->LBD16   <-----------------AGL3                    --------->ANAC46  <---------ALFIN1 <---------ATHB12         --------------->AtSPL3 ----->ANAC46 --------->ANAC58              <---------LBD16 ---------TaNAC69(2)--------->YAB1        <---------ARR14(2) ====================MADS_MADS            --------->ARR14(2)               --------->GLK1(2) ---------ALFIN1   --------->ICU4         <-----------GT1    ----------->RAV1(1) --------->YAB1 ---->DEAR3(1)--------->ANAC58  --------->GLK1(2) <---------MYB111(1)  --------->AHL20(2)       -----   ctccacacataaatggaagcaatgatcatatgagaattttgtagtttccgcacctacacaaacccacaaaaaaaaaaattctatattaacaaaaaaactt  6448400                                                                            <---------MYB52(1)                                                                           <---------RAP2.6(3)                                                                     --------->SPL1(2)                                                                     <-------TEIL                                                                     ------->TEIL                                                                     --------->SPL7                                                                    <---------SPL1(1)                                                                 ------->TEIL                                                                 <---------------AtSPL3          >>>>>>>>>RAP2.2                                       <------------------SPL14        <-----------ARR10                                    <---------------AtSPL3                 -       <---------CCA1(2)      ---------->DOF2       --------->YAB1 <---------SPL7              ------   <-----------GT1 --------->DAG2    --------->AHL20(2)    <-------TEIL   --------->RAP2.6(2)  <----- ------>GT1      ---------->DOF2   <----------DOF2 <---------YAB1<-------TEIL           ----------->GT1   gtatataacatatctaaacaaaaggttttgttgaaagcttttaatacatgtttatgatatatacatgtacgtacggccggtatacatgtttagttatttt  6448500                                                               --------->At4g35610                                                               <---------At4g35610                                                             <---------DEAR3(1)          <---------ICU4                          <---------DAG2          -------->P -------->YAB1      <-----------GT1     <---------MYB52(1) <---------ANAC58 --->AHL20(2)    --------->YAB1       ------>ZmHOX2a(1)    <---------ANAC58                         - ----AHL20(2) --------->YAB1   ---------->DOF2    <----------DOF2     <------ZmHOX2a(1)      --------   attcaaaattgatcaatactaataacaggcctgaaaagtcctgttatctatgctttatcttgctcggctcaaggacaacccgactaataggcctcttata  6448600                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                               ------->GAMYB                                              --------->ANAC58                                              --------->ANAC46         --------->AHL20(2)       <XXXXXXXXXXXXXXXXXXXMIR775                           <---------GLK1(2)         <---------AHL20(2)     <---------ARR11(3)                                     --------->ARR11(3) --------->ANAC46               --------->ARR11(3)                                     <---------ARR11(3) --------->ANAC58              --------->YAB1 --------->ANAC58                     ---------->DOF2 --------->ANAC58----------->RAV1(2)<-----------RAV1(1)      <------ZmHOX2a(1) --------->YAB1 -------->ZAT18  ===============================RAV         <----------ID1--------->AHL20(2) ->YAB1--------->YAB1 ----------->GT1      <---------WRKY38(1)    ----------->GT1<---------YAB1 -----   agcacacaattttaaatatacctgaagttaaaatgatattgttggacaacgaaactgctaataggacaatgtgaaaaaaaatcatcaaagattttgtgat  6448700                                                           ------>ZmHOX2a(2)                                                          <---------GLK1(1)                                                          --------->GLK1(1)            <---------AHL20(1)                           --------->ARR11(3)            <---------AHL20(2)     ---------->DOF2       <---------ARR11(3)            --------->AHL20(2)<---------WOX13(1)         <---------ARR14(2)      --------->YAB1       --------->AHL20(2)            <---------AGP1     <---------YAB1        <---------AHL20(2)            --------->ARR14(2)     ----------->GT1      --------->AHL20(1)            <---------CCA1(2)   <---------ICU4         --------->AHL20(2)          <---------HSFB2a(2)   --------->YAB1         <---------AHL20(2)          --------->HSFB2a(2)  <---------ATHB12        <---------AHL20(1)         <---------LBD16              <---------AHL20(2)  --------->ICU4       <---------AHL20(2)          <-----------GT1                --------->AHL20(2) ---->GLK1(1)    ----------->GT1  *TSS       <---------AHL20(2)          <---------ZAT14          <--   acccatgatgataaaaaatttgtataaatttaattgaaaaagatgatataatttttctggatctcttagagagactccacttatataattctcttagtct  6448800                                                 <-----------------AGL1                                              <----------DOF2                                        --------->DAG2                 <---------YAB1  <---------AHL20(2)                                       ---------->DOF2                <---------AHL20(2)                                  <---------------AGL15             <---------YAB1<---------AHL20(1)                         --------->AHL20(2)<---------ARR11(3)       <---------AHL20(2) --------->ATHB12               ------------>CBF   --------------->AGL15          --------->AHL20(1)   <---------YAB1               <---------MYB59   ==================================MADS_MADS      --------->ARR11(3)               --------------->AGL15 --------->YAB1<---------------AGL15          --------->AHL20(1)              ----------------->AG------>ZmHOX2a(1)--------------->AGL15   ----------->GT1       ----            <-----------GT1      ----------------->AGL3  --------->AtLEC2 --------->MYB59        <---   --------->GLK1(2)     <---------AHL20(2)--------->ARR11(3)    <---------AHL20(1)--------->AHL20(2) -------LBD16 =====================================================MADS_MADS      <---------ARR11(3)   tggggaatctcatattacccaatttgtttaattttcctataaaaagttcttttccatttatgcaaaaaatattattttggtaaaaatatttattgacatt  6448900                                               --------->ANAC58                                           <------MYB46(1)                                 --------->CCA1(2)                              <<<<<<<<<GATA-1  --------->ANAC58                           --------->ARR11(3)                          <---------DAG2   <------MYB83                                   <---------ARR11(3)              <---------ARR11(3)      <---------ICU4                                      --------->ARR11(1)              --------->ARR11(3)      --------->ATHB12                                ---------->DOF2              <---------ARR14(2)     <---------YAB1                               ---------->DOF2 <-----------GT1          <----------DOF2 --------->MYB59                     ---------->DOF2 ----->AHL20(2)<---------GLK1(1)     --------->ICU4                       <---------AHL20(2) ------AHL20(2)--------->GLK1(1)   --------->YAB1      ---------->DOF2    --------->AHL20(2) --------   tattttctattttgaagatatcgtttgactttatctataatgatttggtatgcaaatgaaagtaaactagtagtatttaaaaaagaaagaaagatatgac  6449000                               <---------ARR11(1)                               <-----------ARR10                               --------->ARR11(3)                               <---------ARR14(2)                            <---------ANAC58                      --------->AHL20(1)                      <---------AHL20(2)                      --------->AHL20(2)                                          --------->ARR11(3)                ----------->GT1<---------ARR11(3)                       --------->ANAC55(2)                --------->YAB1 --------->ARR14(2)           <---------MYB46(3)    <---------GLK1(2)         <------MYB46(1)    <---------ANAC58--------->AHL20(2)        <-----------GT1         -------         <------MYB83 <---------AHL20(1)  ----------->GT1<---------ARR11(3)       <---------ARR11(3)        --------->MYB59--------->ATHB12 ---------->DOF2  <---------ARR14(2)     <---------TOE1(3) --->HVH21 --------->WRKY18(1)<---------CCA1(2)          --------->ARR14(2)     <---------TOE2(3)   acttgtaagtttggtcaagagtaatttattgcatatctattctaaagtaaatttctcaagatttgttgaaatttacatatttaagatttttgagagattt  6449100                                                                                            <--------                                                                                            <--------                                                                                         --------->AHL20(2)                                                                                     <---------AHL20(2)                  --------->MYB59                                                   <---------AHL20(2)                  ----------->GT1                                                   --------->AHL20(2)                  --------->MYB52(2)                         <------MYB83           <---------AHL20(1)               ------------>MYB.PH3(2)                     <---------WOX13(1)    --------->YAB1        <---------HSFB2a(2)                              --------->ATHB12  --------->ARR11(3)        --------->HSFB2a(2)                             <---------YAB1     <---------ARR11(3)       -     <----------DOF2 <---------AHL20(2)    <---------AHL20(2)<------MYB46(1)    <---------YAB1   ---- -->CCA1(2)   <---------ZAT6               --------->AHL20(2)----------->GT1  --------->YAB1<--------   gagtaagcttttagaagagttagttatttgttagagtttttatatttaaaaacaaaatatgattggtgatttgcgaagatttataataaaatttaagatt  6449200  Previous    Next  AGI:  At5g19172.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19175.1); contains domain PD864278 (PD864278) Range:  from: 6448117    to: 6448734    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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