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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                        --------->ARR14(2)
                                                                  --------->ATHB12
                                                                 <---------YAB1
             --------->ARR14(2)                                --------->YAB1
             <---------GLK1(2)                                 --------------->AGL15
             <---------ARR14(2)                               ----------------->AG
            <------ZmHOX2a(1)                                 ----------------->AGL1
          <---------TOE2(2)                                   <-----------------AGL1
          <---------TOE1(2)        --------->ATHB12          <---------At5g28300
        --------->TOE1(2)  <---------AHL20(2)               --------->YAB1
       --------->ATHB12   --------->AHL20(2)             --------->WOX13(1)  <---------WRKY18(1)
       --------->YAB1   --------->YAB1               <-----------GT1    <---------ARR14(2)
---------->AtSPL8      <---------YAB1              <---------WOX13(1)------>ZmHOX2a(2)
 
agtacataaatcataggattctctctataataaatagttgatttggacaacttgatttaccaattaccatgatcggaacttgactggcaatttgaaatga  6400800
                                                                              <---------YAB1
               <---------At4g35610                                           --------->ARR11(3)    <
               --------->At4g35610                                           <---------ARR11(3)    <
 --------->LBD16                            <------NtERF2                 --------->YAB1    --------
<---------ANAC58                           --------->RAP2.6(2)    --------->At4g35610      <--------
<---------ANAC46                       --------->MYB59   --------->AtLEC2 --------->AHL20(2)--------
<---------ANAC58                --------->YAB1   <----------DOF2  <---------At4g35610  ----------->GT1
 
aatgcgcgtatgtaagacatctgtgtgtgaatgtataacaattaggccgaaactttattcatgcatagcagatgaaataatatcattgtctggtataatt  6400900
                                                       <----------DOF2
                                                    ------>MYB83
                                                    -------->P
                                                  --------->MYB46(3)
                                                  <---------MYB111(2)
                                                  <---------MYB111(1)
                                                  <---------MYB59
                                                  <---------MYB46(2)
                                                 --------->DEAR3(2)
                                            --------------->AtSPL3
                                            --------------->AtSPL8                         ---------
---------ANAC58           ------->TEIL      <---------------AtSPL8                         <--------
---------ANAC58    <---------YAB1     --------->ANAC58<---------DAG2                    --------->AHL20(2)
->ATHB12     <---------AHL20(2)       --------->ANAC58--------->TOE2(3)               --------->AHL20(2)
-YAB1<---------WOX13(1) <---------ZAT18     --------->MYB59                          --------->YAB1
->ATHB51    --------->AHL20(2)  --------->At4g35610 ------>MYB46(1)            <----------ID1 <-----
 
gggcttggattgattttaaatttttaatgcacatatgctgcaagaaataggtaccaaccttttacaaacccattagcccattgagccaaaataatatata  6401000
                                                                          ----------->RAV1(2)
       --------------------->WRI1                                  --------->ARR11(3)
   --------->ANAC58                                                <---------ARR11(3)
   --------->ANAC58                                               <---------CCA1(2)
 --------->MYB52(1)                                             --------->AHL20(2)
>AHL20(1)                                 <---------ANAC58   <---------ARR11(3)
-AHL20(1)              <---------MYB52(1) <---------ANAC58   --------->ARR11(3)    <-----------GT1
----AHL20(2)     <<<<<<<<<TBF1<----------DOF2            ---------->DOF2  <---------At4g35610-------
 
atgctaacgccttagttttcttcttcgtttcttcttttcttcttgacttgtttatgaacagaaagatttatatcttcacctgttttttacttcatccgaa  6401100
                                                                                    --------->KAN4(2)
                                                                                   <----------TaMYB80
                                                                                   <---------HSFB2a(1)
                                                                                   --------->KAN4(1)
                                                                                   --------->HSFB2a(1)
                                                                                   <---------KAN4(1)
                                                                                  ---------->TaMYB80
                                                                                  --------->ARR14(2)
                                --------->YAB1                                    <---------ARR14(2)
                               <---------TOE2(3)    --------->MYB52(1)--------->ARR14(2)
                 <---------At4g35610               <---------ATHB51   <---------ARR14(2)       <----
     <-----------GT1      --------->ZAT6           <---------AHL20(2)<------ZmHOX2a(1)      <-------
-->LBD16         --------->At4g35610         ----------->GT1   <---------TGA1a    <---------KAN4(2)
 
aaaaaaaaaaaccatttggcatcttacaaacactaagataacaaaacttggaaaataatggaactgatgtgaggaactgaaatcgaatattctaatattt  6401200
                                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                   xxxxxxxxxxxxxxxx>smallRNA(le3)
                                                                  xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                                  xxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                                xxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                                xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                                xxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                               xxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                               xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                               xxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                               xxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                               --------->ZAT18
                                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                              xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                              xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                                            xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                            xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                           <---------------AtSPL8
                                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                           xxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                           <xxxxxxxxxxxxxxxxsmallRNA(i)
                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                           xxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                           xxxxxxxxxxxxxxxx>smallRNA(si3)
                                                           xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                           xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                          xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                        xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                       xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                       xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                       xxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                       xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                       xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                      xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                      xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                      xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                     xxxxxxxxxxxxxxx>smallRNA(fl3)
                                                     xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                    xxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                    xxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                    xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                    xxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                    xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                   xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
                                                   xxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                   xxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                                   <---------ZAT6----------->RAV1(2)
                                                   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                   xxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                  xxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                 xxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                               xxxxxxxxxxxxxxxx>smallRNA(le3)
                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                               xxxxxxxxxxxxxxxxx>smallRNA(se3)
                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                               xxxxxxxxxxxxxxxxx>smallRNA(le3)
                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                              xxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                              xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                              xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                             xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                            xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           xxxxxxxxxxxxxxxx>smallRNA(s)
                                           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                           <---------AtMYB61xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                           xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                          xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                          xxxxxxxxxxxxxxxxx>smallRNA(le3)
                                          xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                          xxxxxxxxxxxxxxxxx>smallRNA(se3)
                                          xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                         xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                         xxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                         xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      xxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxx
                                        xxxxxxxxxxxxxxxx>smallRNA(fl3)                       xxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              xxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxx>smallRNA(le3)              xxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         xxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxx>smallRNA(le3)                 xxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxx>smallRNA(le3)               xxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(se3)
                                        xxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <xxxxxxxxxxxxxxxxsmallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <xxxxxxxxxxxxxxxxsmallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  --------->DEAR3(2)  ---
                                        xxxxxxxxxxxxxxxx>smallRNA(s)------>NtERF2     xxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxx>smallRNA(le3)   xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(s)----
                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                        xxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->ANAC58  xxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ANAC46  xxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)xxxxxxxxxxxxxxxx>smallRNA(i)
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     xxxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        xxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ARR14(2)<-
                                        xxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxxxxxxxxxxxxxx
                                        xxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                        xxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ARR14(2)--
                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(i)
                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-------TEIL xxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ZAT14xxxxxxxxx
                                        xxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        xxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC58xxxxxxxxxxxx
                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxx>smallRNA(si3)
                                        xxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)
                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                      --------->ZAT14   *TSSxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx
                      <---------ZAT18   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                      --------->ZAT18   xxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)--
                      <---------ZAT14   xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)
                    --------->ANAC46  ----------->RAV1(1)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<----
                  --------->ZAT6   --------->ANAC58xxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxx
         --------->TOE2(3)         --------->ANAC58xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->LBD16<
-------GT1<---------YAB1         ---------->DOF2xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxx
--ICU4<---------GLK1(2)      --------->YAB1xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------LBD16---
 
acaaatccaaattcttaatgaacactgcactagcatgaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcc  6401300
         --------->AHL20(2)
         <---------AHL20(2)
    <---------ZAT18
    <-------TEIL
 <------MYB46(1)
 --------->At4g35610
 <------MYB83
<---------MYB46(3)
--------->MYB55(2)
--------->ALFIN1
xxxxxxxxxx>smallRNA(i)
xxxxxxxxxx>smallRNA(s)
xxxxxxxxx>smallRNA(i)
xxxxxxxxx>smallRNA(s)
xxxxxxxx>smallRNA(s)
xxxxxxx>smallRNA(s)
xxx>smallRNA(s)
xxxxxxxxxx>smallRNA(l2)
xxxxxxxxx>smallRNA(l2)
xx>smallRNA(s)
xx>smallRNA(i)
xxxxxxxxxx>smallRNA(l2)
------>LBD16                              ----------->GT1
xxxxxxxx>smallRNA(l2)                     <---------ANAC58
----->LBD16                               --------->ANAC55(2)
xxxxxx>smallRNA(i)                        <---------ANAC55(2)
xxxxxxxxx>smallRNA(l2)                    <---------ANAC46
xxxxxx>smallRNA(s)                        <---------bZIP60(1)
xxxxxxxxxx>smallRNA(fl3)                 <------NtERF2
>smallRNA(fl3)                       <------MYB83
--------ZAT2                         <------MYB46(1)
xxxxxxxxx>smallRNA(l2)              <---------AtMYB61
------->ZAT2                        --------->ALFIN1
xxxxxxxxxx>smallRNA(l2)      -------->HAHB4
xxxxxxx>smallRNA(i)          <---------ICU4
xxxx>smallRNA(s)            <---------ATHB51    <---------AHL20(2)
xxxxxxxx>smallRNA(l2)       <---------YAB1<---------ANAC58
--------->RAV1(2)--------->AHL20(2) <---------MYB46(3)      <---------ICU4
-----LBD16   --------->AHL20(2)  --------->ATHB12          <---------YAB1                        <--
xxxxxx>smallRNA(l2)         --------->ICU4--------->bZIP60(1) <---------YAB1             <----------DOF2
---------MYB55(1)<---------AHL20(2)<---------WOX13(1)      --------->ICU4             --------->ARR11(3)
xxxxxxx>smallRNA(l2)   ----------->GT1 <---------DEAR3(1)--------->YAB1  --------->YAB1 ------>ZmHOX2a(2)
--->NtERF2   <---------AHL20(2)<---------TOE2(3)--------->AHL20(2)      <---------YAB1<---------ARR11(3)
 
cggctggtgcatttatttttttaaatctgtaattatggattggtggcgtaataaaacaattcatgattataggttatcattttccatttgatcttttgct  6401400
                                           <-----------GT1                 --------->ANAC58
                                    <---------CCA1(1)                      --------->ANAC58
                                    <---------RVE1(1)             <------NtERF2
                                   <---------GLK1(2)              --------->LBD16
         ------->TEIL              --------->ARR11(3)            <---------LBD16
------->MYC3                       <---------ARR11(3)            <------NtERF2                    --
<-------MYC3           <---------MYB52(1) <-----------GT1        --------->LBD16                 <--
-------ALFIN1      <---------At4g35610<---------AHL20(2)        <---------LBD16                -----
 
ccacatgtaatgaaactaattcatctgttaagcgtagagatttttttaccaattcttgttgaataggcccgggaagacaagcacaagtgaagttaatgga  6401500
                                      <---------ANAC58
              --------->ANAC58        <---------ANAC46                      --------->ATHB12
------------->AtSPL8---------->DOF2   <---------ANAC58                     <---------YAB1   <-------
--------DOF2  --------->ANAC58        ----------->GT1             <-------TEIL<---------WOX13(1)
-->TEIL       --------->ANAC46 --------->AHL20(2) ---------->DOF2--------->ALFIN1      <---------ICU4
 
ctttgtacatctaatacaagcccaaaaggaacataaaaattgggtgaaactgtgaaagtgaccaagaggtgcaacttgttgattgattcaaaattacaaa  6401600
                        <-----------RAV1(1)
                     <---------AHL20(2)
                    <---------YAB1
                  -------->HAHB4
                  <--------ATHB1
                  <--------HAHB4
                  --------->YAB1                       <---------------AGL15
                  <---------ICU4                       --------------->AGL15
                  --------->ATHB51                <---------DAG2
                 <---------YAB1               <---------ZAT14
                 --------->AHL20(2)           --------->ZAT18
                 --------->ICU4               <---------ZAT18 <---------YAB1
               --------->YAB1                 --------->ZAT14 <---------TOE2(3)
 --------->ATHB12<---------ATHB51        <----------DOF2  --------->YAB1
--YAB1        --------->AHL20(2)   <-----------GT1<----------DOF2      ----------->GT1  ---------->DOF2
 
tggatgatggaaaacaaataataattaatggggctgtttttcttctttctgcacttttctaaaataagattgggatgtcaaaaaaaaaaaaaaaagaatg  6401700
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AGI:  At5g19095.1   
Description:  pre-tRNA. tRNA-Gly (anticodon: GCC)
Range:  from: 6401241    to: 6401311    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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