Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                            <--------                                                                                       <---------AHL20(2)                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(1)                                                                                      --------->AHL20(2)                                                                                      --------->YAB1                  --------->YAB1      --------->DOF5.7(2)                            <---------YAB1             ------->TEIL            --------->TOE2(3)                             <--------HAHB4 ------>CCA1(2)  <-------TEIL      <---------TOE1(2)               <-----------GT1 --------->YAB1 >TOE2(3) <---------YAB1<---------ZAT18    <----------DOF2 <---------GLK1(2)      <---------YAB1<----   ataggggatgttatgaatattcatagtccccatttccaacgtttactttgttgtactaatagattattttcacacttaaaatgtattattatattttata  6387100                                <---------AHL20(2)                        ---------->DOF2                  ---------->DOF2              <---------------AGL15              --------------->AGL15                         --------->YAB1          <-----------GT1              <----------DOF2   --------->AHL20(2)     <---------AHL20(2)  --------->YAB1 ----CCA1(2) <-----------------AGL3                    --------->AHL20(2) <---------YAB1 -AHL20(2)<<<<<<<<<<GT-3b ----------->GT1     <---------ZAT18          <---------YAB1     <---------ZAT14 -------GT1  <-----------------AGL1  --------->TOE2(3)--------->AHL20(2)--------->YAB1    --------->ZAT14   tccacttactatttttctttaaaagggaaagtatttaaatctcaacaatgcacaaattaaaatcataaaccatattataagaattttgactctatactat  6387200                        <<<<<<<<<MYB98                       ----------->GT1              <---------YAB1            --------->AHL20(2)            <---------AHL20(2)           --------->AHL20(2)           <---------AHL20(1)           <---------AHL20(2)        --------->AHL20(2)                                                 --------->TOE2(3)  <------        <---------AHL20(2)          --------->CCA1(2)            --------->ARR11(3)  --------->At5g28300        --------->AHL20(1)         --------->ARR11(3)      <---------AHL20(2)    --------->MYB52(1)       --------->AHL20(2)          <---------ARR11(3)     --------->AHL20(2) --------->AHL20(2)<-----       <---------AHL20(2)   ---------->DOF2 ------>ZmHOX2a(1)    <---------ARR11(3) ----------->GT1   attcgaaaattaaattatttttgtatgttaaaaagaagatataatcctctctatattcaaatttatagattttagaacattaaaaacggtaataccatta  6387300                                                                                                 <---                                                                                                 <---                                                                              <---------------AGL15                                                                              --------------->AGL15                                                                        --------->YAB1         ------                                                                    --------->AHL20(2)         <-----                                                                    <---------AHL20(2)        -------        --------->TOE2(3)                                           <---------AHL20(1)     <---------YAB1        <----------DOF2                                             --------->AHL20(1)    --------->AHL20(2)    ------>ZmHOX2a(1)                                              --------->AHL20(2) ----------->GT1    <---------CCA1(2)                                      <---------MYB52(2)----------------->AGL3 ---MYB52(1)      --------->bZIP60(2)                    <-----------ARR10 <-----------GT1<---------AHL20(2) ----ICU4  --------->YAB1    ------>ZmHOX2a(1) <-----------GT1 --------->MYB46(3)  ---------->DOF2   gtactcctatctttaatgacacatcatactcctaatctagtttgacaatttacatttcacatctaaccattaaattataaccaaaaaaagattaaaatta  6387400                                    --------->ANAC58                                    --------->ANAC58                                 --------->ZAT18                                 <---------ZAT18        ----------->TBP          <---------ZAT14             ---------->DOF2  --------->AHL20(2)             --------->ZAT14            --------->AHL20(2)  <---------AHL20(2)           --------->ANAC46         --------->AHL20(1) ------YAB1                 <---------ZAT14             --------->AHL20(2) ------TOE2(3)              --------->ZAT18             <---------AHL20(2)        --------->MYB52(1) --->AHL20(2)               <---------ZAT18             <---------AHL20(1)        <---------DOF5.7(2) ----AHL20(2)               --------->ZAT14            --------->AHL20(2)       --------->ARR11(3) -->AHL20(2)            <---------------AtSPL8      ------>ZmHOX2a(1)       ---------->DOF2*TSS <----   atattaaaatataaaaacccaaaataagagtacactgcactcacttcatttctcctaataaattaaagcccatcttaaaaaagataacgaagtagcaact  6387500              <---------At4g35610              --------->At4g35610                                            ------>MYB83          <-----------HVH21                                                  ------>MYB46(1)          <-----------TGA1                                                 <---------MYB46(2)      <---------ICU4                                                       <---------MYB111(2)     <---------YAB1                                                       --------->ANAC46   --------->YAB1       xxxxxxxxxxxxxxxx>smallRNA(i)               <---------TOE2(3)   ---------->DOF2 ------DOF2   <---------CCA1(2)                                    <---------TOE1(3)<---------ZAT6   ttgcatcatcatcgtcatctctctctctctctctccctctcattctgaaatagatgaagtagagaagttaatgttcaccaaacttactgtaaagcctgaa  6387600                                                                                                    -                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                                          --------->ANAC58                             --------->ANAC58                        --------->ARR14(2)<---------ARR14(2)                <----------DOF2                                      <---------ARR14(2)--------->ARR14(2)           <<<<<<<<<TBF1     --------->ANAC58                <----------DOF2   <---------AtLEC2<-----   actttcttccttcttcttctttgcttcattcaagtaagtctctgatttgcattctctgtttctcttttgcatatttgtcttccatggcaaatacccaata  6387700                                                                    <---------At4g35610        ------                                                                    --------->At4g35610        ------                                                            <---------YAB1                    <------                                                         <---------MYB52(1)                 --------- --------->DOF2                                    <---------ZAT14<---------ANAC58       --------->TOE2(3) ----ATHB12<----------DOF2                         --------->ZAT18<---------ANAC58       <----------DOF2   actaaagagacttctttcttctgttttctcagataatgtatgatatgtctgtgttcacagttatgtttgcttctgacttctaaatctatttctttaataa  6387800                                                                   --------->DAG2                                                                  ---------->DOF2                                                        <------ZmHOX2a(2)                                                       <---------ARR11(3)                                                       --------->AGP1                                                       --------->ARR14(2)                                                       <---------AGP1                                                      <---------CCA1(2)                                        --------->At4g35610  <---------ZAT6                   ------- -->HAHB4                               <---------LBD16--------->ARR11(3)                     <------ --->YAB1    <---------REM1(1)          <---------At4g35610----------->GT1               <-----------TGA1 ---YAB1     <-----------RAV1(1)       --------->MYB52(1)------>ZmHOX2a(2)              <---------ANAC58 >YAB1      <---------TOE2(3)        --------->MYB46(3)<---------ARR14(2)               <---------ANAC58   tagtttttgggtttgatgttgcagattaatctttcaagaaccagcggagttgtctcagatctagtgataaaagtgagatagatttgaatttcgtcaccaa  6387900                                         <---------MYB46(3)                                    --------->LBD16                                   <-----------RAV1(2)                                 --------->CCA1(2)                                 <------ZmHOX2a(2)              ---------->DOF2   --------->ARR14(2)      --------->ICU4            <---------ARR11(3)    ---------->DOF2             <---------ARR14(2)                        ----------->GT1 -------->AGL15                 --------->AGP1     <---------DAG2  <---------ANAC55(2)            <-- ---------AGL15                 --------->ARR11(3) <----------DOF2 --------->ANAC55(2)        <------   ttcaagaaaagatgagtaaagaagagtttatgaagatccaggtttgttcatcacttttttatatttcttacataacatgaaaaatttgctctgtttttat  6388000  Previous    Next  AGI:  At5g19090.1    Description:  heavy-metal-associated domain-containing protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G06130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71098.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71268.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 6387491    to: 6390026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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