Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <----------DOF2                     --------->GLK1(2)                    <---------ARR14(2)                    --------->ARR11(3)                    --------->ARR14(2)                    <---------GLK1(2)                    <---------ARR11(3)                   <---------HSFB2a(1)                   --------->HSFC1(2)            <---------ANAC58                   --------->HSFB2a(1)           <---------ANAC58         <------ZmHOX2a(1)<---------AHL20(2) <----------DOF2               <---------MYB52(1)  <------MYB83     <---------HSFC1(2)  --------->REM1(2)           --------->AHL20(2)  <------MYB46(1) ----------->ARR10 <---------ANAC58            --------->TOE2(3) --------->MYB59<------ZmHOX2a(1)   <---------ANAC58            --------->TOE1(3)        --------->ZAT2 ------TOE2(3)<---------TOE2(3)     <---------ANAC46     <---------YAB1  --------->MYB59 --------->At4g35610   agtttggtttaggacttaggaagattcttttatttgtctcgtgtagacttttcttgattatgttagccttaaaattcggtatttagtcacaagctgaaga  6374800                                                                                           <---------ICU4                                                                                          <---------YAB1                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                       <----------DOF2              <---------AHL20(2)                                         --------->ANAC58                           --------->AHL20(1)                 <----------DOF2         --------->ANAC58                           --------->AHL20(2)             <----------DOF2             --------->ANAC55(2)                       --------->AHL20(2)       <-----------TGA1               --------->ARR14(2)                       --------->AHL20(2)      --------->YAB1          <---------ATHB12      <-----------GT1           --------->AHL20(2)  <---------AHL20(2)  <---------WOX13(1) <---------ANAC55(2)            --------->AtLEC2--------->YAB1 --------->AHL20(2) --------->ATHB12  <---------ARR14(2)               --------->WOX13(1)<---------AHL20(1)   caaataaatcgtcatctttctttcattgacaaatcatccgattacgcattgttttctcttttcaaaacttggtcattcaaataaaaaaaattataattcc  6374900                                                                                               <-----                                                                                             <-------                                                                                            <--------                                                                                            <--------                                              --------->YAB1                              <---------YAB1                                     <---------AHL20(2)                                 --------->YAB1                       <----------DOF2       <------ZmHOX2a(2)                          <---------ICU4                 <---------ICU4   <---------AHL20(2)                                   <---------YAB1               --------->GLK1(2) --------->AHL20(2)         <-----------HVH21       <---------AHL20(2)      <---------AHL20(2)         <---------AHL20(2)     <-------TEIL                <---------YAB1   atttgtatataatgaagaatcagtactttgagtaattaaatatttggatcatgaaatattcatgtcatatacttatgtcattgttttttattattatttt  6375000                                                                                              <------                                              <---------ARR14(2)                     --------->ARR14(2)                                              --------->ARR14(2)                     <---------ARR14(2)  --------->WRKY18(1)                    <-----------GT1                            <------NtERF2<--- ----AHL20(2)                    <---------YAB1                                    ----------->GT1  < --YAB1                --------->YAB1 <---------AHL20(2)                       --------->ANAC46  ---- -AHL20(1)         <----------DOF2<---------ICU4                 ----------->GT1  <---------ANAC46<-- -AHL20(2)      ---------->ID1   --------->ICU4      --------->YAB1 <---------AHL20(2)--------->CCA1(2)   tttggtcaaacttattttgttctttttataatgtcattattttatacatatccaaatataaaaaacatagttaattcatacaaggcggatacaaatgtga  6375100                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                 --------->AHL20(2)                                                                            ------------>CBF --------->AHL20(2)                                                  <---------ARR11(3) <---------AHL20(2)                                  ----------->GT1 <-----------ARR10 ---YAB1  --------->KAN4(2)                     <---------YAB1    --------->AHL20(2)  --------->AHL20(2) ------YAB1                                     <---------ANAC55(2)  --------->ARR11(3)       ------- ---------YAB1                            --------->AHL20(2)      <---------AHL20(2)  <---------AHL20(2) ----->ICU4           <---------YAB1   --------->AHL20(2)      --------->YAB1    <---------AHL20(1) -------ICU4        <---------------AGL15 <---------AHL20(2)  <---------AHL20(2) <---------AHL20(2)   ttattaattgttcattctcttcttatttttagtaaatcgaataaaaaattatgtatggttctaaataataaaatctcatccaatttaatttaaaacaaaa  6375200                                                     ------->MYC3                                                    <---------O2                                                    --------->ANAC46                                                    --------->O2                                                  <---------ALFIN1                                                  --------->DEAR3(1)                                                ------>NtERF2                                                <-----------HVH21                                               --------->ANAC58                                               --------->ANAC58                                          <---------SPL7                                         <------MYB46(1) <----------DOF2                                         <------MYB83<-------MYC3                                        --------------->AtSPL3                                        --------->MYB59----------->GT1                                 --------->ANAC58<------NtERF2                                 --------->ANAC58----------->HVH21                              <------NtERF2    *TSS------>NtERF2                     <---------ANAC58                            --------->ANAC58 --------->ANAC58                       <---------ICU4                            --------->ANAC58 --------->ANAC58          ----------->HVH21 --------->ANAC58                           --------->RAP2.6(3) --------->ANAC46       <-----------HVH21  --------->ANAC58                        <---------TOE2(3)<---------DEAR3(2)          --------->ANAC46<---------ANAC58 --->DOF2 <------------CBF<------ZmHOX2a(1) --------->SPL7   <---------TOE2(3)     --------->ICU4   ggaattagataatattgaaatcgattaaggacggcaaggaagtcggtacgcgccacgcggtttaatgaaaccagtcacagttctaatgcttacgctaaac  6375300                                           --------->ANAC58                               <<<<<<<<<GATA-1                               <<<<<<<<<GATA-2                               <<<<<<<<<GATA-3                     ------->GAMYB <---------ALFIN1                    --------->ANAC46       --------->ANAC58                    --------->MYB46(3)     --------->ANAC46                  <---------ANAC46                  --------->MYB52(1)       --------->ANAC55(2)            <---------ARR14(2)        -                <---------ATHB12   --------->ANAC46             ---------->ID1                      -              ------>MYB83     <<<<<<<<<GATA-4        ---------->DOF2     --------->ARR14(2)   ------              ------>MYB46(1) --------->ARR14(2)  --------->ANAC46<----------DOF2        --------->At4g35610   atggagtctccaaaccaaatcaacgacaattgaatccacaccttcacgaaaccccccaaagtttttgtctttttcggtttcggattacatcatctccaag  6375400                                          <---------ANAC58                                          <---------ANAC58                                          <---------ANAC46                                          <---------RAP2.6(2)                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------ARR11(3)                                 --------->ARR14(2)                                 <---------AGP1                             ---------->DOF2                           ------>ZmHOX2a(1)              <---------GLK1(2)  <---------ARR14(2)              --------->ARR11(3) <---------ARR14(3)              <---------ARR14(2) --------->ARR11(3)              <---------ARR11(3) --------->ARR14(3)   ----------->RAV1(1)     ===============HOX2a_HOX2a                                           <---- --------->MYB46(3)        ==============HOX2a_HOX2a--------->ETT(1)                  --------->At4g35610 -------->ANAC58          --------->TOE1(3)  <----------DOF2              <---------MYB46(3) <------- -------->ANAC58          --------->TOE2(3)  <---------ARR14(2)          <---------AtMYB61   <------- --->ANAC46   --------->ARR14(2)--------->RVE1(1)  ---------->ID1   <-----------RAV1(1)--------->ARR11(3)   acaagcaccagcatcagattttctgcatccttaaagatctcgttgcggtttttgtcggaattgtttcgatttgttgtggttctcaataagctctcgcttg  6375500                                                                                      ------>ZmHOX2a(2)                                                                                      ===============                                                                                     ================                                                                                     <---------At4g35610                                                                                     --------->GLK1(1)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(3)                                                                                    <---------ARR14(3)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                    <-----------ARR10                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                               --------->ALFIN1                                                                              ------->MYC2                                                                              <-------MYC3                                                                              <-------PIF5                                                                              ------->MYC3                                                                              <-------MYC2                                                                             --------->TGA1a                                                                             <---------O2                   <-------GAMYB                                             <---------TGA1a                ------->GAMYB                                                --------->O2               --------->DEAR3(1)                                            <---------ANAC46              --------->ATERF1(1)                                            ========================bZIP_DOF          --------->ANAC58                                                 <---------DOF5.7(2)          --------->ANAC46                                               <-----------HVH21        ---          --------->ANAC58                                               --------->DOF5.7(2)      <--          --------->LBD16         --------->LBD16                      <---------ANAC58          ----        <---------LBD16         --------->At4g35610                    <---------ANAC46      <-------       --------->MYB52(1)       <---------At4g35610            <----------DOF2------->PIF5<----------DOF2      <---------ALFIN1         --------->MYB52(1)             <---------DAG2------------>OsbHLH66<--- -------HVH21<---------ATERF1(1)<---------LBD16               --------------->AGL15<---------GLK1(1) --ANAC58--------->DREB2C(2)  <---------WRKY38(1)      <---------ZAT6  <---------ANAC58 --------->At4g35610 --ANAC58--------->DEAR3(1) <-----------HVH21  <---------AtLEC2========================bZIP_DOF------   tcagagaaacaccggcaacgccgttgaaatagtcaccggagaccattttgcatcgtagagttcgccttttatggcgttcacgtggggatctgctctccgg  6375600                                                                            <---------MYB59                                                                           ----------------->AGL1 ================HOX2a_HOX2a                                           <---------WOX13(1) ================HOX2a_HOX2a                                         --------->ATHB12            <--- ------>GLK1(1)                                               <---------HSFB2a(1)                ==== -------GLK1(1)                        ----------->GT1        --------->HSFB2a(1)               ----- ----->ARR14(2)      --------->At4g35610        <-----------GT1  <-------TEIL            <----------- --LBD16     <---------YAB1          <---------ANAC58         --------->HSFC1(2)         ------------ ------ARR14(2)      <---------At4g35610      <-----------GT1 <---------HSFC1(2)        <------------ --->LBD16------>ZmHOX2a(1)          <---------ANAC58        <---------------AtSPL8<---------TOE2(3)-   atttctgttctccttatccttgtagctgcaattgtcttagcttgttattttctccctgttgagaaggttcgtaattggcctaattagggttctcaatgtg  6375700  Previous    Next  AGI:  At5g19060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71094.1); contains InterPro domain Immunoglobulin-like fold (InterPro:IPR013783) Range:  from: 6372801    to: 6374905    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g19070.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71095.1); contains InterPro domain SNARE associated Golgi protein (InterPro:IPR015414) Range:  from: 6375247    to: 6377662    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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