Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------CCA1(2) --GAMYB<---------ANAC58 ---DEAR3(2) ---MYB46(3) --At1g77200                   --------->LBD16 --DREB2C(2)              <---------ZAT2 --ANAC46                 --------->At4g35610               <---------HSFB2a(2) --DEAR4(1)       <---------DAG2          ---------->DOF2   --------->HSFB2a(2) --DEAR3(1)  ------>ZmHOX2a(1) --------->HSFB2a(2)      --------->ICU4         --------->ZAT6    ---- --HVH21<---------ANAC58  <---------At4g35610      --------->YAB1        ----------->GT1      -------   tgagcctatagcttcctccaatttttgaagctccgagacctatacaaagacaaacataatttttagaaaattcaattgttaaaactactactccattgat  6337700                                        <---------AHL20(2)       --------->TOE2(3)           <-------            --------->DAG2             --------->AHL20(2)        --------->TOE1(3)           --------    --------->MYB52(1)               --------->TOE2(3)           --------->YAB1        <---------ARR11(3) ----->AHL20(2)                      <----------DOF2        <---------AHL20(2)         --------->ARR11(3) -->ATHB12 ---------->DOF2       <------ZmHOX2a(1)          --------->AHL20(2)     <------ZmHOX2a(1)   taaacaaaaccgaaaaagtttacaagtatttgataggaactttaaattgagatactattcattttaatcttaagaaatatgaagaggacgatattaagtg  6337800                                             ----------->GT1          --------->ANAC58                                       <---------WOX13(1)             --------->ANAC58                                    <---------YAB1              ---------->DOF2                                 --------->GLK1(2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  ---------->DOF2<-----------ARR10          <----------ID1        ----------->GT1 --ANAC55(2) --------->ATHB12    <---------ARR11(3)     <---------ZAT14       <---------TOE2(3) --->GT1    --------->ICU4       --------->ARR11(3)     --------->ZAT14     <---------AHL20(2)   aaaatgtagaagcattgattaaaagttttcaagaaaatctaattgaaatgaaaaacagtttagagacaaagtaagaaattaatgtgataaaaacctgtaa  6337900                               <---------ANAC58                           <---------HSFB2a(1)                ---------->ID1 <---------ANAC58           <---------ANAC46           ------>ZmHOX2a(2)<----------DOF2          <-----------RAV1(1)         <---------ARR11(3)--------->HSFB2a(1)    <----------DOF2                                   <         --------->ARR11(3)<---------HSFC1(2)    <---------DAG2                   --------->TOE2(3) <       ----------->ARR10   --------->HSFC1(2)  ------->TEIL              ------>ZmHOX2a(1)       <---   acgaatgcttcgatcttcgtcttcttcgaactttcttgaatccattgtgaaccttttgttgtgtttactcgtttcctactcaaaccgtaatcgaaaattt  6338000                      <----------DOF2                    <------ZmHOX2a(1)          <----------DOF2                          <---------ANAC58         ------>ZmHOX2a(2)                         <---------ANAC58       --------->ARR11(3)                  <---------ANAC55(2)                                    <--       <---------ARR11(3)                  <---------ANAC58                               <---------ANAC58 ---------DAG2    <----------DOF2          --------->ANAC55(2)                            <---------ANAC58 ----------DOF2<------------------------ANAC81  --------->ICU4                            ----------- --------GT1  <----------DOF2              <---------ANAC58  <---------MYB46(3)       ---------->DOF2   cactttttcgatctttctttctttcttttttagtttttgaatagtgcgtaatgacttgaggagttgttgatgatgcagagaaaacgagtaaagcgtgatt  6338100                                 --------->AHL20(2)                      --------->ANAC58                                 <-----------TBP                         ----------->GT1                                 <---------AHL20(2)                --------->CCA1(2)                -  *TSS                   <---------ANAC46                    <------ZmHOX2a(1)                <------ ---------GT1         ------->TEIL                   ---------->DOF2     --------->ANAC58    -------- >GT1         ------->TEIL     <-----------TBP  ----------->GT1  --------->CCA1(2)    ---------->DOF2   ttacattctttctatgaacatatggatgtgtgtatatatatagagagagatagagaaaagagaggagagatagggaagcaaaatttggcaaaggagtgga  6338200                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                         --------->ARR11(3)--------->ANAC58                        --------->ANAC58        ----------->GT1         <---------CCA1(2)  --------->ANAC46                        --------->ANAC58    ---------->DOF2     <---------YAB1             --------->ANAC58                        --------->ANAC46  --------->ANAC58   --------->ICU4               --------->WOX13(1) --------->DOF2       --------->MYB52(1)  --------->ANAC58   <---------YAB1           --------->REM1(1) ---ZAT14      --------->At4g35610<---------GLK1(1)      <---------HSFB2a(2)        <---------------AGL15 ->ALFIN1      ----------->GT1  <------ZmHOX2a(1)        --------->HSFB2a(2)    ------->TEIL     ----   gagaaagtctgcaaataagctaaataacgcaagaggaaatgtgcaagaaagtgtaacttcgagattattgttgtatatcatgtatgcttcatcaagcaat  6338300              <---------ANAC55(1)              <---------ANAC46             <-------TEIL         ----------->GT1       ---------->DOF2  <-----------GT1                 ---------->DOF2                     <-----------GT1 ------>AHL20(1)            ----------->RAV1(1)                    ----------->GT1 -------AHL20(2)         --------->ANAC46                        <---------bZIP60(2) ------>AHL20(2)         ------->GAMYB---------->DOF2         ----------->HVH21                     < ----->AHL20(2)       --------->MYB52(1)----------->GT1  <----------DOF2                 <----------DOF2   tttattaccaaaagttacatgtaataacagcaacaaaaaagaaagaaaaaaaaaaactacttttgtgacatgttacaaccttcttcttaatctttttttt  6338400                                    <----------DOF2            ----------->GT1     ---------->ID1                                          <----------DOF2           --------->DAG2      <-----------GT1                                         <---------ANAC58          --------->DAG2   <------------------------ANAC81                 ----------->GT1         ---------->DOF2 ---------->ID1                      <----------DOF2<-------GAMYB   <--------   --------->TOE1(3)  <----------DOF2                   <----------DOF2    <---------MYB46(3) -------   --------->TOE2(3) <------------------------ANAC81   <---------DAG2     <---------YAB1<---------DAG2 -----------GT1    <---------ARR11(3)               <-----------GT1    <---------YAB1  <---------ANAC58   ttttaccttgaaaaaggtcaatttcttttcgtttttctctttatgttttttagtttaccttttcttttcttatatgatggttacaagttgctttatcaaa  6338500                                                                         --------------->AGL15                                                                        <-----------------AGL3                               --------->AHL20(2)                       ----------------->AGL3                            --------->YAB1                              <---------YAB1                   ------>MYB46(1)                                      <-----------------AGL2                   ------>MYB83<---------AHL20(2)                   <-------GAMYB  --------->GLK1(2)               <---------At5g28300    ------->TEIL              ------------>MYB.PH3(1)    ----------->HVH21   --------->AHL20(2)                      ------------>MYB.PH3(2)    <---------YAB1 -YAB1        <-----------GT1  --------->AHL20(1)            ---------->DOF2      <---------GLK1(2) --->DOF2 <----------DOF2--------->YAB1                --------->AHL20(2)<---------------AGL15   gcagccctgactctttttaccatccattaaaaataaaatgaatgttttaggcagaaataaaacaaaagtcagttactatttttagaatctaatatgatca  6338600  Previous    Next  AGI:  At5g18980.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT4G14280.1); similar to binding [Arabidopsis thaliana] (TAIR:AT3G06210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71079.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70618.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 6334834    to: 6338102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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