Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ARR14(2)                                                            --------->ARR14(2)                                                            --------->ARR11(1)                                                       --------->ALFIN1                                                     <---------ANAC46                                                    <------NtERF2                                                  <---------ANAC46                                                  <---------DEAR3(1)                                                 <---------LBD16                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 ------>NtERF2<-------TEIL                                                <---------ATERF1(1)                                                ------>NtERF2--------->ARR14(1)                                               <------NtERF2<---------GLK1(2)                                               --------->ATERF1(1)                                               <---------DEAR3(1)                                              <---------LBD16--------->GLK1(2)            <------ZmHOX2a(1)                 ------>NtERF2<---------GLK1(1)                       <-        <---------ANAC46                      --------->LBD16--------->CCA1(2)                   <---        <---------ANAC58                      --------->At4g35610                               -----        <---------ANAC58                <------ZmHOX2a(1) ----------->ARR10                   <------ -------->ANAC46            <------ZmHOX2a(1)--------->DEAR3(1)                           <---------ICU4 ---------GT1            <-----------RAV1(2)--------->ATERF1(1)                          <---------YAB1   ttaccccatggcgaggagagtgagagaccaggagattagagaggaagccgcggcggagtggagattcggagagtcccattgaagaacgttgatgattccg  6334200                           <------NtERF2                          ------>NtERF2                          --------->LBD16                          <---------ATERF1(1)                         --------->DEAR3(1)                         <---------ATERF1(2)                         --------->ATERF1(2)                         <---------DEAR3(1)                        --------->ATERF1(1)                        --------->RAP2.3(1)                        <------NtERF2                                    <---------LBD16                       ------>NtERF2                                    --------->MYB52(1)                       <---------RAP2.3(1)                             <---------ALFIN1                       <---------ATERF1(1)                 --------->ETT(2)                  <-------                      --------->DEAR3(1)                   <---------ETT(2)                  --------     <---------O2     --------->ANAC46                     --------->ANAC58                  <-------     <---------ANAC46--------->ATERF1(1)                   --------->ANAC58         <---------ARR14(2)     <---------bZIP60(2)<---------LBD16                    --------->RAP2.6(2)      --------->ARR14(2)     <---------REM1(1)<---------DEAR3(1)      <----------ID1          --------->MYB46(3)     --------     <---------TGA1a------>NtERF2             <---------YAB1 <------NtERF2     ----------->GT1      <   <---------ZAT14  <---------ATERF1(1)       <---------ANAC55(2)   ----------------->AGL1   <------- --------MYB46(3)  <---------O2    <---------ANAC46       --------->SPL7------>NtERF2 <---------LBD16 ------MYB52(1)    ----------->HVH21     <---------ICU4  <---------MYB52(1)--------->LBD16   <------- ---->LBD16        --------->DEAR3(1)   --------->ICU4   <-----------HVH21<---------LBD16    -------- ---LBD16          --------->O2   <---------TOE2(3)  --------->MYB52(1)--------->ANAC46    ----------   gtgagtgatgtggccattccgacgacgccggcgattaacgtgaatattacgaaaaaaccggtcgccatgttccccaccgggaagtatatcgggaatatct  6334300       ----------->HVH21   <------NtERF2                                  <---------ICU4  --------->LBD16                                 --------->YAB1 ----ARR10                                       --------->ICU4 ->ARR14(3)         --------->At4g35610          <---------YAB1 --ARR11(3)        --------->ANAC46             <---------TOE2(3)               <-----------GT1 ->ARR14(2)        <---------DEAR3(1)          --------->YAB1                <---------ICU4 ---------LBD16 <---------ETT(2)     ---------->DOF2                     <---------AHL20(2)        <- --ARR14(3)     --------->ETT(2)--------------->AGL15                    --------->AHL20(2)      <--- --ARR14(2)   <-----------HVH21 <---------------AGL15             --------->TOE1(2)         <-------- ->ARR11(3)   --------->REM1(2)----------------->AGL3           <---------TOE2(3) --------->ANAC55(2) ->ARR10    >>>>>>>>>SUP       <----------ID1<---------WOX13(1) <---------TOE1(3) <---------ANAC55(2)   tcgccggaagtgacagtgtcgacgctgcaaaataccacaaaaagaagattgatgatgacattttctaacgttggattaattgttacttaatcagttgtta  6334400                                             ------->GAMYB                                            --------->MYB46(3)                                           <---------At5g28300                                          --------->MYB52(1)                                          <-----------GT1                                        <---------WOX13(1)                                     --------->ICU4                                    --------->LBD16         -------->P                 <---------RAP2.6(3)        <-----------GT1            ----------->GT1     --------->MYB111(1)           <---------ANAC55(1)                                            ---     --------->MYB52(2)            <---------ANAC58                                            ------     --------->MYB46(2)            <---------ANAC55(2)                <-----------------------TaNAC69(2)   <---------MYB52(1)              <---------ANAC46         --------->YAB1                    ------- ---------DOF2                     --------->ANAC55(2)     --------->ICU4                   --------- ------YAB1   <---------GLK1(2)    <---------ANAC58        <---------YAB1                   <-------- -MYB46(3)    --------->ARR14(2) ------>NtERF2      ---------->DOF2 ----------->TGA1     <-------TEIL   tctttgttagttaccagactcgcgagttctctcgatgccgtgattaacagcccaagaagcgatgatggtgatgacgaaatagagaccaagattcagcatc  6334500               ------>NtERF2                                    --------->AHL20(2)            --------->At4g35610                                --------->YAB1         --------->ZAT2                                      --------->AHL20(2)         --------->At4g35610                          ----------->RAV1(1)         <---------At4g35610 ------>ZmHOX2a(1) <---------ARR14(2)         <---------ZAT2    ----------->RAV1(2) --------->ARR11(3)      ---------->DOF2   ------>ZmHOX2a(2)      --------->ARR14(2) ------>At4g35610 <----------DOF2    --------->AtLEC2 ------>NtERF2 --->At4g35610 <---------RAP2.6(3)   --------->ICU4  --------->ANAC46                              <- ---->RAV1(1) --------->DEAR3(1)--------->ANAC58     <---------ETT(1)  ---------->DOF2          <---- >At4g35610 ------>NtERF2 ------>ZmHOX2a(1)    <---------GLK1(2)--------->AHL20(1)              ----- -At4g35610 <---------ATERF1(1) --------->ANAC58--------->GLK1(2) --------->AHL20(2)   --------->MYB52(1)   agaagcatgaaagctgccgactttgatcctcctgaagccatgcttataagattctccgacaaaaaaaataatataaagacttcttaaaaaaacagacagg  6334600                                            *TSS --------->ICU4                                   ------>ZmHOX2a(2)                                  --------->GLK1(1)                                  <---------GLK1(1)                                  <------ZmHOX2a(2)                                 <---------ARR14(3)                                 --------->ARR11(3)                                 --------->ARR14(2)                   <-----------GT1                                 <---------AGP1  <---------YAB1    ----------->TBP                                 <---------ARR14(2)         <------------CBF ---------DOF2                   <-----------ARR10        --------->AHL20(1)             --------->ARR11(3) -----ARR11(3)  <---------ANAC58 <---------ARR11(3)       --------->ARR11(3)       <------ZmHOX2a(1)- ---->ARR11(3)  <---------ANAC58 --------->ARR14(3)      <-----------TBP       --------->TOE1(2)    <   tctttttctctggttttgtcttgggatgatcacaagatctctgtgtgtgtcatgtttgtatatattgatatatatccagttcataggaatagatgttcct  6334700                                                                                                   <-                ------------>CBF                                                                   --           --------->ICU4                                                                         <--       ------------>CBF            ------>ZmHOX2a(1)                                    <---------ANAC58      --------->ANAC58            --------->TOE1(3)                                     <---------ANAC58      --------->ANAC58            --------->TOE2(3)          ------>ZmHOX2a(1)       <----------DOF2    ---------->DOF2             ---------->ID1              --------->TOE2(3)     <---------ARR11(3) -------->At4g35610         <----------DOF2              --------->ARR14(2)       --------->ARR11(3) ---------At4g35610    <----------DOF2                   <---------ARR14(2)<---------ANAC46       ---   tctgctgaaagcaatgttttcaattctttactttgtccttaactttggactaagaatcaaatcctaagcttcaattttcgtttagacctttcttgcagaa  6334800                    <---------AHL20(1)                    --------->AHL20(1)             ---------->DOF2            --------->AHL20(2)            <---------AHL20(2)        <---------AHL20(2)        --------->AHL20(2)        <---------AHL20(1)        --------->AHL20(1)       --------->AHL20(2)       --------->YAB1                                              <--------       <---------AHL20(2)       ------->GAMYB                                             --------->At4g35610   --------->AHL20(2)          --------->MYB46(3)                                         <---------At4g35610 --------AHL20(2)   --------->AHL20(2)                                             <---------ICU4 ------->AHL20(2)   <---------AHL20(2)                                             <---------ARR14(2) -------AHL20(2)    <---------ARR11(3)                                             --------->ARR14(2) ------>AHL20(2)    --------->ARR11(3)                                            --------->ICU4   tttaatcaaataaattaaagaatatattccataaccatcacatttgtacattgtttattcattcttcttacaaaacaatgagtcatatttgcagctctaa  6334900                            <---------ANAC46                       <------ZmHOX2a(1)             <---------RVE1(1)             <---------CCA1(1)                                                                      <            <---------ARR14(2)                                                                     --            <---------ARR11(3)                        <---------GLK1(2)                          ----     <----------DOF2<---------AtLEC2                  <---------ICU4<---------ZAT2       --------->ARR14(2) --DOF2     --------->ARR11(3)                  ------>ZmHOX2a(1)  ----------->ARR10     <---------ARR14(2)   tgcagagctttgaagatattttgcaggatgatgtgtattcttcatttatcctctaagaatttccaaggctagctctgctagtgaatggacagttctgcta  6335000                                                                --------->HSFC1(2)                                                                <---------HSFC1(2)                                                                --------->HSFB2a(1)                                                                <---------HSFB2a(1)                                                           --------->HSFB2a(2)                                                           --------->HSFC1(1)             --------->ZAT6  --------->TOE2(3)     --------->LBD16        <---------ARR11(3)           ----------->RAV1(1)  ---------->DOF2 <---------At4g35610     --------->ANAC58 ------>NtERF2      --------->LBD16             --------->At4g35610     --------->ANAC58   <---------CCA1(2) ---------RAP2.6(2)<---------ANAC46           ---------->CDC5 <<<<<<<ZML2 --------->ARR11(3) ------->RAP2.6(3)<---------LBD16   <---------ARR11(3)     <---------HSFB2a(2)     --------->HSFB2a(2) ------->HVH21   --------->MYB52(1) --------->ARR11(3)     <---------HSFC1(1)<----------DOF2   tgacggcttagtccaacagtaccggagaaaacatcaaagttctcaagctcagccgtagtttctagaaccttctcaagctctttctctagacccatctctc  6335100  Previous    Next  AGI:  At5g18970.1    Description:  AWPM-19-like membrane family protein. similar to AWPM-19-like membrane family protein [Arabidopsis thaliana] (TAIR:AT1G29520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71076.1); contains InterPro domain AWPM-19-like (InterPro:IPR008390) Range:  from: 6333213    to: 6334644    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18980.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT4G14280.1); similar to binding [Arabidopsis thaliana] (TAIR:AT3G06210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71079.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70618.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 6334834    to: 6338102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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