Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->TGA1a                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                  <---------O2                                                                                  --------->O2                                                                                  --------->ANAC58                                                                                  <---------TGA1a                                                                                <---------ALFIN1                                                                              <-----------HVH21     -                                                                              ------>NtERF2        --                                                                           <---------At4g35610   <---                                                                           --------->ZAT2        ----                                                                           --------->At4g35610   <---     <----------DOF2                                                      ------->TEIL           ---- -->GLK1(2)                                        --------->DAG2      <---------REM1(1)        ----- --ARR11(3)                                      ===========================================bZIP_DOF- --GLK1(2)                           <---------ANAC58       ================================bZIP_DOF- ->ARR11(3)    ------>NtERF2  <----------DOF2    ---------->DOF2     --------->At4g35610        ----- -RVE1(1)     --------->DEAR3(1)     <---------ANAC58       <----------DOF2<---------ZAT2     <------   tgggaggctttcttcgacgacgatgacttcgtctttgaagcttgtgtaagggaaaggctgagctttagggaagatgaagctgccacgcgagtagcgacac  6312900       --------->ALFIN1     ==========================================MYC_MYB     --------->ANAC55(2)     <---------ANAC55(2)     --------->O2     <---------ANAC58                                                                            <---     <---------ANAC58                                                                            <---     <---------ANAC46 --------->TOE2(2)                                                          <---     <---------TGA1a  --------->TOE1(2)                                                          <---     <---------ANAC55(1)           <---------WRKY38(1)                                          <----     <---------O2    --------->TGA1a                               --------->ARR14(2)           <----     --------->TGA1a <---------ANAC55(1)                           <---------ARR14(2)         <------  ----------->HVH21  ==========================MYC_MYB        --------->ANAC55(2)            <-------GAMYB -------->ANAC58     <---------ANAC58                         <---------ANAC55(1)            <------- ------->LBD16       <---------TGA1a                          <---------AtLEC2               <------- ----MYC3            --------->ANAC55(2)        --------->ATHB12 <---------MYB46(3)         <-------- --->MYC2            <---------ANAC58         <---------WOX13(1)--------->ALFIN1           <---------TOE2(3) ----MYC2            <---------ANAC46  ------->GAMYB          <---------ANAC58             <---------YAB1 --->MYC3            <---------ANAC55(2)<-----------HVH21     <---------ANAC46         --------->ARR11(3) ---->ANAC58  <------NtERF2        <---------WRKY12           <---------ANAC58     --------->YAB1<--- -------->ANAC58  --------->ARR14(2)  --------->MYB46(3)  <---------GLK1(1)       --------->ICU4----- -------->ANAC46  <---------ARR14(2)--------->MYB52(1)   --------->ALFIN1<-------MYC3<---------YAB1 ---->ANAC58 <---------TOE1(1)    <------ZmHOX2a(2)     <------ZmHOX2a(1)------->MYC3--------->ICU4 ---ALFIN1 ------>NtERF2          =============================HOX2a_HOX2a        <---------YAB1<----   gcgcgtaacgtgaggccgaggttacgtgcgagatggatcaacggtcggattgatttgaggagttgcgtggttccacatgttttgatgatgattttggttg  6313000                                                                      --------->ZAT18                                                                      <---------ZAT18 ---MYB46(1)                                             <---------ANAC46 ---MYB83                                                <---------DEAR3(1) ------ANAC58                                 <---------ARR14(2)      --------->ZAT14 ------ANAC58                                 --------->ARR14(2)      <---------ZAT14 --MYB83                                      <---------GLK1(2)<---------ZAT14 -----MYB46(3)                           --------->TOE1(2) <------NtERF2   <---------ZAT14 --P---------->DOF2                     <---------ZAT2  <---------LBD16    --------->ZAT14 --ANAC58                               --------->ZAT2<---------DEAR3(1)   <---------ZAT18 --ANAC58                               --------->HSFC1(2) --------->ATERF1(1) -MYB46(3)                              <---------HSFC1(2)--------->LBD16--------->ANAC46 ------ANAC46 <---------WRKY18(1) <-----------HVH21  --------->SPL7 --------->ZAT14 ---->MYB59<---------ANAC58--------->ANAC58 ----------->ARR10  --------->ZAT18 --MYB46(1)<---------ANAC58--------->ANAC58 <---------YAB1<---------ATERF1(1)   ggtatacaaagaggcttgactctgagagaacgtaagcgtcgaagctacgattcgctacggcggagaccactgtgcactgcacttcgtttaagacttggtc  6313100    <-------TEIL                                                                            ---------   --------->ARR14(1)                         <------MYB83                            --------->ANAC46   --------->CCA1(2)                          <------MYB46(1)                        --------->HSFC1(1)  <---------ARR14(2)                        <---------WOX13(1)                       --------->HSFB2a(2)  --------->ARR11(1)                      <---------MYB46(3)                    <----------DOF2  <---------GLK1(2)                       --------->ATHB12      --------->ARR14(2)   <---------HSFC1(1)  --------->ARR14(2)   --------->GLK1(1) <---------YAB1         <---------ARR14(2)   <---------HSFB2a(2)   taaagattcgaagtctattagacggagtcccatagggtttttggtgattggtttgtcatcgtcgaagaaccgaagttcgagtcttttctcgaaaccctcg  6313200                                --------->ARR11(3)                         --------->At4g35610                                     <---------GLK1(1)                      <------ZmHOX2a(2)                                    ---------->DOF2                     <---------ARR11(3)        --------->ZAT14         --------->ANAC46                     --------->ARR11(3)        <---------ZAT14         --------->ANAC55(1) <---------ANAC58                   --------->ICU4     <---------YAB1                   --------->ANAC58    <---------ANAC58 >TOE1(2)        ---------->DOF2<---------ARR11(3)   <------ZmHOX2a(1) --------->ANAC58    <---------ANAC46   aacccagacactgccattgcaaagatcagaagaagatgttatgaaacagaacagaggaagttgcaagaagaacacggcaaaggaaatgtgtttgtgtgtg  6313300                           <---------YAB1                         --------->ATHB12                         <---------MYB46(3)                                                <-------GAMYB                         *TSS                                                            --------->LBD16                        <---------YAB1           <---------AHL20(2)                     <---------ANAC58                        --------->ICU4         <-----------TBP                          <---------ANAC58                      ----------->GT1      ----------->GT1           <---------ARR14(2) <---------ANAC46                     <---------ZAT6   <---------ZAT14               <------ZmHOX2a(1)  <---------LBD16                  --------->ALFIN1 <----------ARF1    <------ZmHOX2a(1)          <------ZmHOX2a(1)   agtagagagagaagagagaggtagtggtgattagtgggagagaagtggtatttataggagagggtttggaggatagagaagaaggagcatgcgggttaag  6313400                                                                                                   --                                                                                                 >>>>                                                                                                 <---            <------------CBF                                                                     ----           <---------ICU4                                                       ------->TEIL     ----           --------->ATHB12                                                     <---------ARR14(2)---          <---------YAB1                                                       <---------CCA1(2) >>>>          --------->ICU4                                                    ------->TEIL         >>>>        --------->YAB1                                                 <---------ANAC46          >>>>        <---------ICU4                                                 <---------ANAC58         -----      --------->GLK1(2)          ---------->DOF2                       <---------ANAC58 ------->TEIL     --------->YAB1   --------->ICU4     <---------YAB1             ------->TEIL--------->ARR14(2)<--   agaccaagaatcatgattgtaggcataatgaacgagaaagatgatgagagtttgtgttttgttttgtatgtatgcgtgtatgtatctgtgtatgtgagag  6313500           <---------ANAC58         --------->ALFIN1        <---------ZAT18       <---------ZAT6 ---->ZmHOX2a(2) >>>>>GATA-3 ------ARR11(3)                                                         ---------->DOF2 ----->ARR11(3)                                                       <-------GAMYB ----->AGP1<---------ANAC58                                          <------MYB46(1) ------>CCA1(2)                                                      --------->MYB55(2) >>>>>GATA-4                                                         <------MYB83    <---------ARR14(2) >>>>>GATA-1                                                 <-------TEIL       --------->ANAC58 >>>>>GATA-2                                      --------->YAB1     ----------->GT1 --------->ARR14(2) ---->GLK1(1)                               <---------------AGL15    <---------MYB46(3) ----ZmHOX2a(2)  <---------GLK1(2)  <-----------RAV1(1) <------ZmHOX2a(1)       --------->ANAC58   <-   atctagttagtgtgcgtctgattctgttctgtattcttgtgttgttctgtaatgagaaggagtttcatgggtggttaagcgcatgcaaatttggatgttt  6313600                     <---------ARR11(1)                                       <---------ICU4                     --------->ARR11(3)                               ----------->GT1                    <---------CCA1(2)                                 --------->AtLEC2               --------->YAB1    <---------At4g35610                --------->GLK1(1)            --------->YAB1 <---------ANAC58                         ---------->DOF2        <---------DAG2     <---------ANAC58 --------->MYB52(2)     <---------ARR14(2)              <-        <----------DOF2 <----------DOF2   <---------MYB52(1)       --------->ARR14(2)----------->RAV1(1) ----------GT1<---------YAB1   <-----------RAV1(2) --------------------->WRI1 --------->YAB1  <------   ttttctattactttttataatcaaatctttcttgcaggtgatatgttagttcgatttgataatatcgcagaaatgcaaaatcatgaacaacaaaaaatgt  6313700                                                <---------AHL20(2)                 --------->AHL20(2)             --------->AHL20(2)              --------->YAB1                   <---------AHL20(2)                           ---------        --------->TOE2(3)            --------->WRKY45                                      <---------KAN4(1)      ------>NtERF2                  --------->WRKY12                                      --------->KAN4(1)  ----------->HVH21                  --------->WRKY38(1)                                  <------ZmHOX2a(2) <---------WOX13(1)     ----------->GT1    <---------YAB1                        <---------AHL20(2) -----ZmHOX2a(1) <---------AHL20(2)<----------DOF2  <---------AHL20(2)           --------->AHL20(2) ---REM1(1)--------->YAB1    <-----------GT1--------->AHL20(2)  <---------AHL20(2)   <---------LBD16   aggattgacgccttaataataaaacatggtttaactcctttgactattatttattttaagaactatgaaattgtgcaaagtatttatttcggatcattct  6313800  Previous    Next  AGI:  At5g18930.1    Description:  BUD2/SAMDC4 (BUSHY AND DWARF 2); adenosylmethionine decarboxylase. similar to SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE) [Arabidopsis thaliana] (TAIR:AT3G02470.3); similar to SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE), adenosylmethionine decarboxylase [Arabidopsis thaliana] (TAIR:AT3G02470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71067.1); contains InterPro domain S-adenosylmethionine decarboxylase, core; (InterPro:IPR016067); contains InterPro domain S-adenosylmethionine decarboxylase; (InterPro:IPR001985) Range:  from: 6311727    to: 6313325    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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