Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ARR14(2)       <---------HSFC1(2)      <---------ICU4 --------->At4g35610           -------->HAHB4                                                    ---- ---->ANAC58                   <--------ATHB1                                                   ----- ---->ANAC55(1)             --------->YAB1                                                      <---- ---->ANAC58              ------>ZmHOX2a(1)                                                   ------- ---->ANAC46             --------->TOE2(3)                                           --------->ETT(2) ----LBD16     <----------DOF2<---------ATHB51                                       <---------ETT(2) ---ALFIN1 <---------RAP2.6(2)--------->ICU4                            <-----------GT1      --------   ggaagatgaagtttcggcttctatgctccttaataattcatcgtctgattccgatttgatggggcagaatgtttttacttcttcatctcgacagaatgat  6309000                                                                      <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)      <---------YAB1                                               ============================HOX2a_HOX2a   -------->HAHB4                                               =============================HOX2a_HOX2a  <---------ICU4                                               <------ZmHOX2a(1)    <---------RVE1(1)    --------->YAB1                                             --------->ANAC58      --------->ARR11(3)   <---------ATHB12                                         ===================================HOX2a_HOX2a --------->ICU4                                         ==================================HOX2a_HOX2a <---------TOE2(3)     <-----------RAV1(1)                 <------ZmHOX2a(1)         <---------ARR11(3)<---------AHL20(2) ----->YAB1                             <----------ID1             --------->AGP1    --------->AHL20(2) ------>GT1                 --------->AtLEC2 --------->ANAC58   --------->YAB1    ------>MYB46(1) -----YAB1               <-------TEIL  --------->ANAC58      --------->WOX13(1)   ------>MYB83 -->YAB1           --------->ANAC58    --------->ANAC58  --------->ANAC58       --------->TOE2(3) ->ICU4            --------->ANAC58<------ZmHOX2a(1)     --------->ANAC58       <---------MYB59   gataaatctgttgcacagaaaacgaaattcatgccaaggacaaggacaaggacaatctcaagtcaatgagatctttataaaacctaattaatgatgatgc  6309100                                                    ------>ZmHOX2a(2)                                                    ====================HOX2a_HOX2a                                                   =====================HOX2a_HOX2a                                                  --------->ARR14(2)                                                  --------->ARR11(3)                                                  <---------ARR14(2)                                           <------NtERF2                                           <---------ZAT2                                          <---------RAP2.6(3)                                          <---------DEAR3(2)                                          <---------ATERF1(1)                                          ------>NtERF2                                         <---------DEAR3(1)                                         --------->ATERF1(2)                                         <---------ATERF1(2)            <---------At5g28300          --------->RAP2.6(2)           <-----------GT1               <---------RAP2.6(2)       --------->AHL20(2)               --------->ATERF1(1)       ----------->GT1       <---------AHL20(2)             --------->GLK1(2)          <------ZmHOX2a(1)       <---------AHL20(1)           ---------->DOF2<------ZmHOX2a(2)                      <---------DOF5.7(2)       --------->AHL20(1)     --------->GLK1(2)   <---------ARR11(3) <---------AHL20(2)  <---------WRKY12    --------->YAB1           <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------HSFB2a(2)           <---------WRKY38(1)   <---------AHL20(2)    ---------->DOF2--------->RAP2.6(3)--------->HSFB2a(2)   --------->LBD16  ---   agtttttaataaattaccatgagaagagaaagaatcagagaagccggctcgagatcgtcttgtagaaggagttaattgttttccacgattgtcaacgtct  6309200                                             --------->At5g28300                                           --------------->AtSPL8                                           --------->ANAC46                                   <------                                           --------->ANAC58                                   <------                                           --------->ANAC58                                   -------                                <---------ANAC58               <---------ARR14(2)        ----------->GT1                                <---------ANAC58      --------->YAB1           <---------HSFB2a(2)  <                           <---------At4g35610  --------->ANAC55(2)            --------->HSFB2a(2)  -                           --------->At4g35610 <-------TEIL    --------->ARR14(2)     --------->MYB52(1)                   ----------------->AGL1  --------->ANAC55(1) --------->ARR11(3)   <---------MYB52(2) ------>REM1(1)  <-----------GT1<---------ANAC46<---------ANAC55(2)     <---------ARR11(3)   <-------   acatcgctgagtttgtatatttccatatgagatgacttgtgagacacggtacataatcatatacaaatcttgtagatgtttctgaaacaaacagtatatc  6309300      --------->ICU4    ---------->DOF2 ---ARR14(2)                                      <---------ANAC46 ---ARR11(3)                                    <-----------HVH21 -->ARR11(3)                                   <---------bZIP60(1)              --------->HSFB2a(2) ---------HSFB2a(2)                            --------->O2                     <---------HSFB2a(2) -------->HSFB2a(2)  <-----------GT1           --------->bZIP60(1)  ----------->TGA1 --CCA1(2) ---------->DOF2 <------ZmHOX2a(1)   <---------O2         ----------->HVH21       <--------   ttgtagaaaagatgaaagaaaatttaccaggacggagacgaagaagacgacgtcgtggaagagatagtttgtgacgatgagtctcgaaggccttccatgg  6309400                                                                                                <<<<<                                                                                          <---------ICU4                                                                                          --------->ATHB12                      --------->DAG2                                                     <---------YAB1                     *TSS                                                               --------->ARR11(3)              <----------ID1                                    ---------->DOF2         <---------ARR11(3)       --------->ANAC58                                        <------ZmHOX2a(1)       --------->YAB1       --------->ANAC58                            ===================HOX2a_HOX2a     <---------YAB1  <----------ARF1    ---------->DOF2 ---------->DOF2         <---------TOE2(3)        --------->ICU4  <----------ID1 ----------------->AGL1            <------ZmHOX2a(2)                --------->YAB1 -AtLEC2  --------->CCA1(2)---------->DOF2        <---------ARR11(3)        ---------->DOF2<---------   attggagacaagaaatgagacaaaaaagggaaagagagagaaagagagaagagatcaaagactaaggaaagagagagagaaagtaaccatgatcattggt  6309500            --------->AtMYB61           --------->bZIP60(2)                ------>NtERF2                        <-----------GT1           --------->ANAC46                   --------->LBD16            --------->ANAC46      --------->ANAC46                    --------->GLK1(2)              --------->ANAC58      --------->ZAT6                      <---------ARR14(2)       --------->TOE2(3)      --------->REM1(1)                   --------->ARR14(2) --------->YAB1---------->DOF2    <------ <<<<MYB2--------->AtMYB61               <---------GLK1(1)<----------DOF2--------->ANAC58   <-------- ---CBF  <---------ALFIN1    <---------YAB1  --------->ANAC46--------->TOE2(3)    --------->CCA1(1)   tttctcttacaccacctcatcttctcttcttgttattaactgaaaatccgcctcttctctctttcttaatcttagacgaaagaaatatccatttttgcat  6309600                               --------->ATHB51                      <---------ARR14(2)                      --------->ARR14(2)                     <----------TaMYB80                     --------->HSFB2a(1)                     <---------HSFB2a(1)                     --------->KAN4(1)                     <---------KAN4(1)                    <---------KAN4(2)                                  --------->MYB52(1)                    <---------ARR14(2)                  --------------->AGL15    ----------->GT1 ---------->TaMYB80                  <---------------AGL15 ---AtLEC2          --------->ARR14(2)                  ------>ZmHOX2a(1)            <----------DOF2 ---GT1---------->DOF2--------->KAN4(2)                --------->TOE2(3)  ------->GAMYB   ttcagacagaaaatcgccagagaatattctccataatttgatcaaatgttttaaaatcctaaatttagaatactaacagactaatgtctttttagttgtc  6309700                                                                                            ---------                                                                                      <--------P                                                                                      ===============                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                   --------->MYB46(2)                              ----------->RAV1(1)                                  <---------MYB46(3)              --------->AHL20(2)                      --------->YAB1               --------->MYB111(1)              <---------AHL20(2)                   <----------DOF2                 --------->MYB59   <----------ID1  <-----------GT1        --------->YAB1                           --------->MYB111(2)   aaattggaacaaaaatttaaatcaccattttgcaacaaaaacaatgacattttctttgatattcaagaaaacaaaaattgtttgtttggtagtttattct  6309800                                      <-------MYC3                                      <-------PIF5                                      ------->MYC3                                      <-------MYC2                                      ------->PIF5                                      <-------MYC4                                      ------->MYC2                                     --------->TGA1a                                     <---------TGA1a                                     <<<<<<<<<<HY5                                     <<<<<<<<<<AtMYC2                                     <---------O2                                     <<<<<<<<<<ABI5                                     <---------ANAC55(2)                                     --------->O2                           <------MYB46(1)                           <------MYB83                          <---------MYB46(3)                          --------->MYB55(2)                         <---------ANAC46                       --------->MYB55(2)                       <---------MYB46(3)                       --------->MYB52(2)      ----------->HVH21                       <------MYB46(1)------->MYC4                       <------MYB83  --------->bZIP60(2)                      <---------DEAR3(1) ----------->HVH21                    ------->MYC3     ==============================bZIP_DOF                    <-------MYC3--------->bZIP60(1)            --------->MYB52(2)                   --------->TGA1a   --------->ANAC55(2)     <--------P                   <---------O2 <---------bZIP60(1)     ---------->DOF2                   <---------TGA1a   <--------ABF1   ----------->RAV1(1)              --------->PCF2  <---------DOF5.7(2)   ----------->HVH21            <---------At4g35610 --------->ANAC58    --------->ANAC58      --------->bZIP60(1)       <---------YAB1 <---------AtMYB61 <-----------HVH21 <---------TOE2(3)   <---------ANAC58--------->O2 --------->ANAC58    --------->ANAC58 <---------ZAT2   <---------ANAC58================================================bZIP_DOF  --------->ATHB12<---------TOE1(2)  =================================MYC_MYB <---------YAB1  <---------ALFIN1  <---------ALFIN1 --------->ANAC46 <---------At4g35610 >KAN4(2)   --------->At4g35610 --------->ANAC46    <---------ETT(1) --------->At4g35610            < ============================MYC_MYB------>NtERF2  --------->MYB46(3)--------->ZAT2        --------->GLK1(2)   ctattgattgtgatagctcccacgttggtgggtaacgccacgtgtcacagtgacccgacaaaggttagtggagctgaagtcatttgagacaacaatcttt  6309900  Previous    Next  AGI:  At5g18910.1    Description:  protein kinase family protein. similar to RBK2 (ROP BINDING PROTEIN KINASES 2), kinase [Arabidopsis thaliana] (TAIR:AT3G05140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71053.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 6306830    to: 6309421    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version