Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------At4g35610             --------->At4g35610              --------->At4g35610                          --------->YAB1         <----------DOF2     ---------->DOF2  <---------At4g35610                         <---------YAB1   aaatttagagtctttagcagagaaaacaaaataaagtttccaaatttaagctcaaaaccgaagatgaattgaaaactcacaagggagaccatatgatcac  6305900              --------->GLK1(1)        --------->LBD16       <---------ANAC58                     --------->ANAC58       --------->ANAC55(2)     ------->GAMYB----------->GT1       <---------ANAC58        --------->ANAC58       <---------ANAC55(2)     --------->ANAC58       <---------ANAC46        --------->ANAC46          --------->MYB52(1)       <---------ANAC55(1)   ---------->DOF2--------->ANAC58  ------->TEIL----------->GT1   attccaattccgtgagaaacccttcatacacaaacgccctgaacacaagtaaaaaaaaaaaacgaatttttcaaaattgttaacattcaaagttttgaaa  6306000                                                                 <------ZmHOX2a(1)                               <---------LBD16           --------------------->WRI1                               --------->TOE2(2)         <----------DOF2                               --------->TOE1(2)      <---------WRKY18(1)    --------->ANAC58                              ----------->RAV1(2)   <---------WOX13(1)       --------->ANAC58                        <---------TOE2(3)           <----------DOF2   <---------TOE2(3)          <---           <---------DAG2   <---------GLK1(1)      <---------ANAC58 ----------->HVH21            ----           <----------DOF2<------ZmHOX2a(1)        <---------ANAC58<---------WOX13(1) <---------ARR14(2)   tttcccaaaatcactttaggggttttgaggaaacctgggtttcgatgaaacctgcttgactttggaaggattgacgaagacgctagaagaactgatcaga  6306100                                                           --------->ANAC58                                                       <-----------HVH21                   --------->ANAC58                                                      ===============================================                                                      <---------O2                         --------->ANAC58                                                      <---------TGA1a                      --------->ANAC46                                                      --------->O2               <---------HSFB2a(2)                                                      --------->ANAC46          ------>ZmHOX2a(2)                                                --------->YAB1                <---------AGP1                                               <---------ATHB12               --------->ARR14(2) --------->ALFIN1                          <---------ATHB12--------->ANAC58   --------->ARR11(3)    - ------ZAT14                          --------->ANAC58--------->TGA1a         <---------ARR14(2)    < ----->ZAT14     <------ZmHOX2a(1)    --------->ANAC58--------->bZIP60(2)    <---------CCA1(2)-------   gaagtggaagattgaagcaggacggagaagatagcgaagaacgaaatcaataatccacgtcgagccatcgataccgcttggatctagatgtacaaggaaa  6306200                                     --------->LBD16                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)                                    --------->LBD16                                   <---------ANAC46                                   <---------HSFB2a(2)                                   <---------LBD16                                   --------->HSFB2a(2)                             <---------AHL20(2)                         <---------AHL20(2)   ------>ZmHOX2a(2)     --------->ATHB51  <------ZmHOX2a(2)      <---------ICU4                                      <---------WRKY12 --------->ARR14(2)      --------->AHL20(2)                          ---------->DOF2 <---------ARR14(2)     --------->ICU4                            --------->HSFB2a(2) ====bZIP_DOF  ---------->DOF2    <---------LBD16                 <---------HSFB2a(2)        <------- -------->GLK1(1)    --------->AHL20(2)                    <----------DOF2   <---------WRKY38(1) ---------GLK1(1)    <---------AHL20(2)      ---------->DOF2     <---------LBD16            *TSS --->DOF2  ----------->GT1 <---------YAB1   --------->AHL20(2)  <---------LBD16  ------->GAMYB ------   ggagatcggaagagagtaaaagtttaattatttttttccgggaaaataaaagatgagagagcttttctcgggaaagtgttcaacggtgatgacaacttta  6306300                                        <---------ANAC46       ------>MYB46(1)                  <---------ANAC58                                    ------>NtERF2       --------->MYB52(1)               <---------ANAC58                                   --------->ARR14(2)       ------>MYB83                 <---------ANAC46                                     <---------ATERF1(1)      --------->MYB55(1)            <---------ANAC58                                   --------->DEAR3(2)     <---------MYB59            <-----------HVH21                                    ------>MYB83     <---------MYB111(1)       --------->O2                                          --------->MYB52(1)     <---------MYB52(2)        --------->ANAC46                                      --------->ARR14(2)     <---------MYB46(2)       --------->SPL7          <---------HSFB2a(2)            ------>MYB46(1)     <---------MYB111(2) --------->ANAC58             --------->YAB1                 <---------ARR14(2)    --------->ANAC46     --------->ANAC58<----------DOF2    <----------DOF2        <---------MYB59 ---DOF2         <----------ID1<---------O2        <----------DOF2 <------NtERF2  --------->DEAR3(2) ---->DOF2     --------->MYB52(1)   <---------ANAC58  --------->HSFB2a(2)   <-----------ARR10  ------   agctctacctaacgatataacgacaaaacgcatacgtcgcttgcgtttcggttctttcagaactttggctccgaaccgaatcgaaccgaaccggctcctt  6306400                          <-----------GT1                                                         <--                 <---------TOE2(3)                                                               ----          <---------------AGL15                                                                 <----          --------------->AGL15                                                              --------        --------->At4g35610                  ----------->GT1                                 <-------        <---------At4g35610             ---------->DOF2       <------ZmHOX2a(1)              <------- >ZmHOX2a(1)<----------DOF2        ----------->GT1        ---------->DOF2                    --------   cttaattagcagctcttttaagaaaattttacagaaattgtttaaagtggaaacatttgaaaaaggattatctgagaaattttgaaatggcagaatttat  6306500 -------AHL20(2) ----->AHL20(2) -----YAB1                                                                   <----------DOF2 ->AHL20(2)            <---------TOE1(3)                                  <-----------GT1         --- --AHL20(2)            <---------TOE2(3)    --------->ICU4            --------->AHL20(2)        <---- --AHL20(1)        <----------DOF2     ----------->GT1            <---------AHL20(2)          <------ ->AHL20(1)<---------AHL20(2)  <---------YAB1                <---------YAB1  <---------DAG2<---------ANAC46   tatatgtttgtatttttttttcttttaggttttatgaaacattgtaatttttggagttgaattttgatttttttatatactttttgttatttggagtaga  6306600                                                                                                    -                                                                      <---------LBD16               <                                                               <---------ARR11(3)                   -                                                               <---------ARR14(2)                   -                                                               --------->ARR11(3)                   -        --------->ATHB51                                       --------->ARR14(2)                <---        <---------ICU4                                        <---------GLK1(1)  --------------->AGL15        --------->YAB1                                        --------->GLK1(1)  <---------------AGL15        <--------ATHB1                                       <---------ARR11(3) ----------------->AGL3       --------->ICU4                                       =================HOX2a_HOX2a         ----       <---------ATHB51                            --------->AHL20(2) ------>ZmHOX2a(2)     ---------   ------>ZmHOX2a(2)                              --------->YAB1    --------->ARR14(2)      <------MYB83 <---------ARR14(2)                  <---------ETT(2)       <------ZmHOX2a(1)   <-----------------AGL3 ------>ALFIN1                       <---------WRKY38(1)  <---------TOE2(3)     ----------------->AGL2 -----ANAC46              ----------->GT1      --------->TOE2(3)    <---------ARR14(2)      <------MYB46(1) ---ZAT14              --------->YAB1<---------WRKY12    <---------LBD16--------->LBD16    --------->MYB111(1)   gtggatcgaataattgttgatacaaatatagtaaaacggtctacgaataccataaaaattcaggatatctgatccgcgtctatccctaaatagtaggtga  6306700                                                                                              -------                                                                                              <------                                                                                            <--------                                                                                            ---------                                                                                           <---------YAB1   --------->MYB52(1)                                                                     <---------ARR11(3) -------->ANAC46                                                                          --------->ARR11(3) ---------ANAC55(2)                                                                      --------->YAB1 -------->ANAC55(2)                                                     ---------->DOF2 --------->ICU4 -------->ANAC58                                                    --------->DAG2      <---------YAB1 -------->ANAC58                                                   ---------->DOF2  <-----------TGA1 ------ARR14(2)                       --------->MYB52(1)       <----------ID1      --------->bZIP60(2) ----->ARR14(2)         ----------->GT1                      <---------LBD16       --------->ANAC46 -->GT1           <-------TEIL   <-----------GT1             ----------->GT1     --------->MYB52(1)   atacgaaacgaataacaaaattcatactgtgaaaataacaaaacgatagttttaagtcaaatatggggaaaaaggaaagaacacaacgtcatgatcatga  6306800  Previous    Next  AGI:  At5g18900.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to AT-P4H-2 (A. THALIANA P4H ISOFORM 2), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygenase [Arabidopsis thaliana] (TAIR:AT3G06300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71052.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Metridin-like ShK toxin (InterPro:IPR0 Range:  from: 6304217    to: 6306292    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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