Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->MYB46(3)          <----------DOF2                                         ------>MYB46(1)           <------NtERF2                                         ============================MYC_MYB                                         -------->P             <---------At4g35610                                         ------>MYB83           --------->At4g35610                            --------->KAN4(1)              --------->TGA1a                            <---------KAN4(1)              ======================bZIP_DOF              --------->TOE1(2)<-------TEIL                <---------O2         <---------MYB52(2)<---------KAN4(2)               <---------ANAC46       ---------->DOF2     ---------->TaMYB80              <---------TGA1a ------------AGL15      ----------->GT1 <---------ALFIN1   --------->O2 ----------->AGL15   <------ZmHOX2a(1) <---------ALFIN1------>ZmHOX2a(2)   ccatttgagcaaagaacccaagaggagggaatattcatgccccaacctctcagtcgatctctcgtgggcagcctttcaagaaaactcatccaagtgataa  6301000                                                                    <---------ARR14(2)                                                                    <---------ARR11(1)                                                                    <-----------ARR10                                                                    --------->ARR14(2)                                                                    ------->TEIL                                                                   <---------CCA1(2)                                                              ------->TEIL                                                            --------->ZAT14                                                            <---------ZAT14                                                            --------->ZAT18       <-----------HVH21                                                            <---------ZAT18    --------->TGA1a                                                     <------MYB46(1)--------->GLK1(2)                            ------>MYB46(1)          <------MYB83  <---------ARR14(1) --------->O2                       <-----------GT1               <---------ANAC58          --------->O2                   <----------DOF2                   <---------ANAC58          <---------O2               ------->TEIL ------>MYB83            --------->MYB55(2)         <---------TGA1a ------           --------------->AtSPL3                   <---------MYB46(3)         ======================           --------------->AtSPL8 <----------DOF2  --------->ALFIN1<---------GLK1(2)  <---------O2           <---------------AtSPL8 <---------DAG2 <XXXXXXXXXXXXXXXXXXXXMIR416   ======================   gagagaaccgagggatgtactctttaaaccaaacaacttttgcccatggaacagtgggtgagtgaacccgaatctgttcccaagtgtcacgagaagagaa  6301100         --------->ANAC58         --------->ANAC58        <-------TEIL       --------->CCA1(2)       --------->ARR14(1)      <---------ARR14(2) --------->ANAC58      --------->ARR11(1) <---------bZIP60(1)                                                    -----      --------->ARR14(2) --------->bZIP60(1)                                                   ------    ----------->ARR10    --------->ANAC46                                                    --------    <-------TEIL         <---------ANAC55(2)            --------->YAB1            --------->At4g35610   <--------P----------->RAV1(2)  ---------->DOF2    <----------DOF2           ---------->DOF2 ------ ----------->GT1         --------->ANAC55(2) ---------->ID1                --------->YAB1--------->ANAC58 ---->DOF2  ------->TEIL --------->ANAC58<---------ANAC58              --------->ATERF1(1)  --------- ===========MYC_MYB  <-----------HVH21   <---------ANAC58        <-----------RAV1(2)     --------->ANAC58 =====bZIP_DOF  --------->ZAT2   <------ZmHOX2a(1)<---------ALFIN1    ------>NtERF2 --------->RAP2.3(3)   agaaggtagatacgaacctgcagcgttacgccataggaaagagtcttgtcccctactttcatgaggcacaggggccatcgtaagagcagccaagaaaagc  6301200                      <------NtERF2                    --------->ATERF1(2)                  --------->ZAT2                  ----------->RAV1(2)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ARR14(3)          --------->ARR11(3)          <---------ARR11(3)          --------->ARR14(2)    ------>MYB83          --------->ARR14(3)    ------>MYB46(1)                                                    --          <---------ARR14(2)  --------->AtMYB61                  --------->GLK1(2)                ---    --------->YAB1<---------At4g35610     <---------ANAC58       <-----------ARR10                --- ---->TOE1(2)     <---------ZAT2--------->ARR14(2)               --------->ARR11(3)             ----- --->ZAT2 --------->AGP1 --------->ANAC58 <---------ANAC46    --------->ANAC58                  ----- ->DAG2   <---------AGP1 --------->ANAC58 <---------ANAC58    --------->ANAC58                <------ --->At4g35610    --------->At4g35610  <---------CCA1(2)  --------->ANAC46                 <------ZmHOX2a(1) ->DOF2  <---------CCA1(2)   --------->MYB46(3)     --------->REM1(1)         --------->ANAC46-------   tgcgaattatcagatcttgcagctggcaagaaccaatccccatttcttgaagcttcaactacgcgagcatcttgccttatacgaagttgtcgaggaccag  6301300          ----------->GT1         --------->DAG2     --------->ANAC58     --------->ANAC46     --------->ANAC58                                          <-----------GT1 ------->At4g35610                                          --------->ARR14(2)            --------->GLK1(1) ------>DEAR3(1)                                            <---------ARR14(2)            ------->TEIL ------>RAP2.6(2)           --------->ARR14(2)             <------NtERF2          --------->ANAC46 ->MYB46(1)                 --------->GLK1(2)            <---------ANAC46     <-----------GT1 ->MYB83---------->DOF2     <---------ARR14(2) <---------HSFB2a(2)          <-----------HVH21 -----RAV1(2)     --------->At4g35610--------->ANAC46   <---------LBD16    <---------CCA1(2)  <<<<<<< -->MYB46(3)   ---------->DOF2  <-----------HVH21 ---------->DOF2 <---------ICU4<---------ALFIN1   ccgctccaagaaaagttaaaagctgtccaaaatccgtccaggcatcataccagaaagaggcggattcaccattacccatatcacacctcatgaactccac  6301400                                                                                          <----------                                                                                        --------->HSFB2a(1)           ----------->RAV1(2)                                                          <---------HSFB2a(1)           <---------At4g35610                                                          --------->HSFC1(2)           <---------ZAT2                                                           --------->LBD16           --------->At4g35610                                                     --------->LBD16           --------->ZAT2                                                          --------->ANAC46<-         <-----------RAV1(2)                                                  --------->DOF5.7(2)  <-    <------MYB46(1)                                                           <---------MYB52(1) <---    <------MYB83                                                            <---------ANAC58     ----    <---------HSFB2a(1)                                                     <---------ANAC58  <------    --------->HSFB2a(1)   <---------YAB1                                 <----------DOF2<---------HSFC1(2) <<<<<<<<<<LFY    --------->YAB1<---------ZAT6                 ------------>CBF   <---------LBD16<---   aatggaaggtttcagctgaatcatactcttgatagtcttagagagcctatttgaaacctccagcatccaatagctctttcgttacccggaaatttctata  6301500          <----------DOF2  ----------->GT1  --------->ANAC55(1)  --------->ANAC46  --------->ANAC55(2)  <---------ANAC55(2)  --------->ANAC58  --------->ANAC58 <-------TEIL --------->SPL7 -GT1  --------->ZAT6 --------SPL7 --------MYB52(1) ------------AtSPL3                              <---------ARR11(3)                                -- ----->ANAC46                             --------->WOX13(1)                                       <- ---REM1(2)     <-----------GT1        --------->GLK1(2)                            --------->ATHB12 ------------AtSPL8              <----------DOF2 --------->ARR11(3)   ---------->DOF2      <---------   cggtacgtaacacttttgttactcatttttgttttctttagaatccatcaagatgtttgaaaaacgttgtctaaaagttatcaagttgatttgaattgtt  6301600                                  <-----------RAV1(1)                                  <---------REM1(1)                             =================RAV                             <---------At4g35610                             --------->At4g35610            <-----------RAV1(1)   --------->ALFIN1            =============================RAV        <----------DOF2<-----------HVH21        --------------->AGL15----------->RAV1(2)   <---------YAB1                                 ---        <---------------AGL15--------->ZAT2      --------->YAB1                                   <--  <---------ALFIN1    <----------DOF2            <---------ICU4                 ----------->RAV1(1) ------->HSFB2a(2) --------->GLK1(2)      <---------ARR14(2)              --------->YAB1      ------- --------HSFB2a(2)<---------GLK1(2)       --------->ARR14(2)           --------->YAB1 ---------->DOF2 ---CBF<-----------------AGL3<---------ZAT2     <------ZmHOX2a(2)   ----------->GT1--------->YAB1----   tccagcacttctttatgtgggattctttcacagctggtgttgcagtttcgatcatgagaaactctgctagtagtaataagaacaacaataaaggtcagaa  6301700       <------NtERF2      --------->LBD16     <---------ANAC46    <---------HSFB2a(2)    --------->HSFB2a(2)                                    <---------KAN4(1)    <---------LBD16              <---------MYB46(3)        --------->KAN4(1)                    <----   <---------ANAC46    ------->TEIL               --------->TOE2(3)                             ----- ------>ATHB12   <---------ARR14(2)               <---------DAG2                         ---------->DOF2 -------ICU4     --------->ARR14(2)             ------->TEIL--------->KAN4(2)          <---------YAB1 -->ICU4<---------ARR14(2) --------->MYB52(1)<---------MYB52(2)                      --------->YAB1 ----->ICU4   <---------ANAC46  <---------MYB52(1)--------->TOE1(3)               <----------DOF2----   tgatttcgcggagatggagtatatgaacataaccgttgttacttcaaacgaaccttatggattattcgacagttcaaatccattcttttataaaagaaga  6301800                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                               --------->MYB46(3)                                                             ------>NtERF2              --------->DAG2            <---------MYB46(2)                             ----------->HVH21           ---------->DOF2            <---------MYB59  --------->ZAT18              --------->LBD16           --------->LBD16         <-----------GT1     --------->ZAT14             --------->ANAC46         <---------LBD16 -----ARR11(3)           <------ZmHOX2a(1)               <---------ANAC58        --------->MYB52(1) ---->ARR11(3)------>MYB46(1)<---------ZAT14             <---------ANAC58 --------->ARR14(2)     ---- ----->GLK1(1)------>MYB83 <---------GLK1(1)            <---------LBD16   <---------ARR14(2)     <---   actccaaagtttaacctaacccttggaggagttcacagtggccatgttcagaggggtttgcgcgacccaatctgcatatcgactagcggaaaaggaaact  6301900  Previous    Next  AGI:  At5g18880.1    Description:  glucose transmembrane transporter. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04650.1); similar to SAE1-S9-protein [Brassica rapa] (GB:BAA77394.1); contains InterPro domain RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); contains InterPro domain Facilitated glucose transporter; (InterPro:IPR000803) Range:  from: 6300537    to: 6301424    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18890.1    Description:  inosine-uridine preferring nucleoside hydrolase family protein. similar to inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G18860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71050.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96887.1); contains InterPro domain Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910) Range:  from: 6301654    to: 6304090    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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