Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------DAG2                                    <----------DOF2               <---------GLK1(2)                           <---------YAB1                 --------->At4g35610                         --------->YAB1                   <---------At4g35610     --------->WOX13(1)<                        <---------ATHB12              <-----------HVH21  <-----------GT1    --------- -------------->AGL1    --------->ICU4       <---------ANAC46  --------->YAB1  --------->TOE2(3)   <- --GT1                --------->WOX13(1)     <---------ZAT6  <-----------HVH21----------->GT1     <--   tccaaaacgagtcgattgtgctatcaattatcaaactacttttagttgtgttaagttgtcatctgtcagaatatttcacatcgtaaatcaaaaaatgatt  6275600                             <----------DOF2                            ==============HOX2a_HOX2a                            ------>ZmHOX2a(2)                          <---------ARR11(3)                          --------->ARR14(2)                          <---------ARR14(2)                          --------->ARR11(3)                          ------->TEIL           <---------AHL20(2)                   --------->ARR11(3)           <---------AHL20(2)       --------->YAB1     <---------AGP1        <---------AHL20(1)                               <--- ---------TOE2(3)  <---------ARR11(3)           --------->AHL20(2)                            <------ >ICU4<---------YAB1 --------->MYB52(1)      --------->WOX13(1)                           <---------YAB1 ----------GT1    --------->YAB1    <---------ARR11(3)               <----------DOF2    <---------ZAT6 ---------GT1  ---------->DOF2     <------ZmHOX2a(1)       --------->AHL20(2)    --------->AHL20(2)   ttaacattttcattatgcaaagataatggatctttcaggatttttatcaattaattttgaattaaaacattcttttaaaaaaaaaaaatagtattagtgc  6275700                                      <---------RAP2.6(3)                                      --------->LBD16                 --------->ANAC58                      --------->ARR14(2)                              ----------->GT1                      <---------GLK1(2)                               --------->ANAC58                  <---------LBD16     ------>NtERF2              --------->MYB46(2)           <---------YAB1            --------->RAP2.6(2)         --------->MYB59         --------->YAB1             <---------LBD16            <<<<<<<<<MYB98         ----------->GT1 -------DOF2  ------->TEIL     <----------DOF2         --------->AHL20(2)          --------->GLK1(2) ---ZAT6--------->ICU4<---------ARR14(2)---------->DOF2<---------AHL20(2)     ---------->DOF2      <-   tatttgtgaaatgatgaattttcggatttttgtcttttgccgcaaagaatttttgaattatataagttaggcaagaaaaaaaaagaatatgtgaataaac  6275800                      --------->ATHB12                      <---------ICU4                     <---------YAB1                     --------->ICU4                      <---------WOX13(1)                   --------->YAB1                     <---------YAB1                   <---------ICU4                    <---------MYB52(1)            <-----------GT1<---------ANAC46         <-------GAMYB           --------->AHL20(2)                      <-----------RAV1(1) ---------->DOF2  <---------ATHB12             <---------ZAT14       --------->LBD16 --------YAB1     --------->ICU4       <---------WRKY12--------->ATHB12          --------->AHL20(2)   tattaaagcacgattaactaatcatgattgtgtttattagttcaacgagttctctgttgattgagtcattccacagataaaaaaaaaatgtagactattt  6275900                     --------->HSFB2a(2)                     <---------HSFB2a(2)          <---------AHL20(2)          <---------AHL20(1)          --------->AHL20(2)      --------->AHL20(2)      <---------AHL20(2)     <---------AHL20(2)                                             --------->DAG2     --------->AHL20(2)            --------->ANAC58    ----------->GT1                          <----     --------->AHL20(1)            --------->ANAC58  <---------At4g35610  ----------->GT1 <---------LBD16     <---------AHL20(1) --------->AHL20(2) ---------->DOF2         ---------->DOF2 <-------TEIL -----   tagataatttattttatttagttccataaaataactcaagaaataaaaagttttgagatgtcaaaaaaaaaaagtaatgtaaaaatgcattattcggaga  6276000                                    ------->GAMYB                                    --------->TOE2(3)     ------->GAMYB                                    --------->YAB1       --------->MYB46(3)                                   --------->MYB46(3)    <---------MYB111(2)                             --------->TOE1(3)           <---------MYB52(2)                        *TSS --------->TOE2(3)       ------>ZmHOX2a(1)                      --------->TOE1(3)             --------->TOE2(3) <----------DOF2       <----------DOF2<---------MYB59          ------>MYB46(1)     ------->TEIL               ------- -----ARR11(3)        --------->TOE2(3)        ------>MYB83 --------->MYB46(3)            <---------AHL20(2) ---->ARR11(3)       <---------ANAC55(2)  <-----------GT1<---------MYB55(2)              --------->AHL20(2)   tgttgatgactttgtgcaaaattacctaaaaccttcaaccaaaatcaccaacttcctcaacaaccgatggacctttcaatatttctctgaattttatcag  6276100                                               <------NtERF2                                             --------->DEAR3(1)                                            <---------LBD16                                           ------>NtERF2                                          --------->DREB2C(2)                                          --------->DEAR3(1)                                          ------->GAMYB                                          <---------ALFIN1                                         --------->MYB46(3)                                       --------->AtMYB61                                       <---------ALFIN1             <------NtERF2                                       --------->DEAR3(1)          --------->LBD16                                      --------->MYB46(3)           ------>NtERF2                                      <---------ABI4(2)           --------->ANAC46                                      <---------MYB55(2)          --------->LBD16       ------>ZmHOX2a(1)                                     <---------ATERF1(1)         --------->LBD16      ------>ZmHOX2a(2)                                     ------>NtERF2               <---------LBD16      ===============                                    --------->DEAR3(1)         ------->GAMYB  <---------TOE1(3)                                    <---------ALFIN1          <---------MYB55(2)    <---------ARR11(3)                                    --------->ANAC46          --------->MYB46(3)    --------->ARR11(3)                                 --------->ANAC46      --------->GLK1(1)      <---------TOE2(3)                          ---------->ID1--------->ABI4(1)    ------>MYB46(1) --------->MYB52(1)                        <-----------RAV1(1)--------->ABI4(1) ------>MYB83    <---------DOF5.7(2)             --------->At4g35610 ------->GAMYB--------->LBD16-------->P    --------->DOF5.7(2) -->YAB1     <---------At4g35610--------->MYB46(3)     <---------GLK1(1) <---------MYB46(3)   aaattgaagactctcagatgtcttctctgtcgcaatcgccaccaccgccggagatggatatccaacccccggcattggttaacgatgatccttccactta  6276200                                        --------->At4g35610                                        <---------At4g35610                                        ------>NtERF2                                        <------NtERF2                               <---------WRKY18(1)                               >>>>>>>>>WRKY18                            --------------------->WRI1                         ------>ZmHOX2a(2)                        <---------GLK1(1)                        --------->GLK1(1)                        <------ZmHOX2a(2)                       --------->ARR14(3)                       <---------ARR14(3)        --------->ANAC58                       <---------ARR11(3)        --------->ANAC58                       <---------ARR14(2)--------->ATERF1(1)                       --------->ARR14(2)<------NtERF2                --------->ALFIN1      <---------LBD16      <----------DOF2  --------->ARR11(3)<-----------RAV1(2)      <---------DAG2  --------->GLK1(1) --------->LBD16 ===============================HOX2a_HOX2a     ------->TEIL                                    ----- ==============================HOX2a_HOX2a--------->DEAR3(1)         <-------TEIL            ------>ZmHOX2a(1) ------>ZmHOX2a(1)    <---------GLK1(1)--------->DEAR3(1)      <------ZmHOX2a(2)   <---------MYB52(1) =======HOX2a_HOX2a  ----------->ARR10--------->RAP2.3(1)      =====================================HOX2a_HOX2a   ttcctccgctttatgggattggggagatctccttgacttcgccgcagacgaacgccttctcgtcgatcaaattcatttccctcccgttctctctcctcct  6276300                                               ------>ZmHOX2a(1)                                               =====================================HOX2a_HOX2a                                             --------->HSFC1(2)                                             ------>ZmHOX2a(2)                                             <---------HSFC1(2)                                            <------ZmHOX2a(2)                                           --------->ARR11(3)                                 --------->At4g35610       --------->GLK1(2)                               <---------ARR14(2)          <---------ARR14(2)                               <---------GLK1(2)     --------->LBD16                               --------->ARR14(2)   --------->ANAC46              <--------P                              <------NtERF2<---------ARR11(3)                 ------>ZmHOX2a(2)                           <---------LBD16 <---------ARR14(2)    --------->ARR14(2)   <------ZmHOX2a(1)                          --------->LBD16  --------->ARR14(2)    <---------ARR14(2) --------->MYB59                          ------>NtERF2  ----------->ARR10<---------ARR14(2)  ===============HOX2a_HOX2a                         <---------DEAR3(1)--------->AGP1<---------HSFC1(2)  ================HOX2a_HOX2a  ------>NtERF2 --------->ANAC46<---------ARR14(2)  --------->HSFB2a(2)      <------ZmHOX2a(2) --------->DEAR3(1)     <---------LBD16  --------->MYB59 <---------HSFB2a(1)--------->ARR14(2) ------->GAMYB  --------->ANAC58--------->GLK1(2)   <---------HSFB2a(2)     <---------ARR14(2) ->ZmHOX2a(1)   --------->ANAC58--------->ARR14(2) <---------LBD16    <xxxxxxxxxxxxxxxxsmallRNA(s)---   ctaccgcctctgattccgacgcaaactccggcggaatctgaattagatccttctccggaagaatcgggttctggttcggatcgggttaggaagcgagacc  6276400                                                                                     --------->LBD16                                                                               <---------ZAT2       <                                                                               --------->ZAT2     ---                                                 ------>ZmHOX2a(1)           ------>NtERF2   --------          ---------->ID1 <---------TOE2(3)<---------ANAC58                  --------->DEAR3(1)    <--    --------->ATHB12     <---------TOE1(3)<---------ANAC58                 <------NtERF2     --------   <-------TEIL    --------->ATHB12 <---------ANAC46                       <----------CDC5  <--------  <--------P      <---------AHL20(2)<---------ANAC58                      ------>NtERF2  >>>>>>>>>TBF1 ------>LBD16     <---------YAB1    <---------ANAC58                   <---------ATERF1(1)  ---------   cgaggttgatttgttccaatttcattgaaggtatgcttccttgttcgtgtcctgagcttgatcagaaattggaagacgccgagcttccgaagaagaaacg  6276500  Previous    Next  AGI:  At5g18830.1    Description:  SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7); DNA binding / transcription factor. Identical to Squamosa promoter-binding-like protein 7 (SPL7) [Arabidopsis Thaliana] (GB:Q8S9G8;GB:Q8VZV0;GB:Q9S723;GB:Q9SMY1); similar to SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G47070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71047.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96886.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 6276024    to: 6280683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version