Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             --------                                                                                             ========       <--------ATHB1                                                                       <--------       -------->HAHB4                                                                    ----------->HVH21       <---------ICU4                                                                    ------>ZmHOX2a(1)       --------->ATHB51                                                                ----------->RAV1(2)      <---------ATHB51                                                                 ------>ZmHOX2a(2)      <---------ATHB12                                                                <------ZmHOX2a(2)      --------->ICU4                                                                 --------->ARR11(3)      <---------AHL20(2)                         --------->ARR11(3)                  <---------ARR14(2)      --------->AHL20(2)                    --------->YAB1                           <---------ARR11(3) ---------ID1                             ------>MYB83 <---------ANAC58              --------->ARR14(2) -->CCA1(2)                               ------>MYB46(1)                      ----------->HVH21 ---- ->AHL20(1)                          <-----------GT1   <---------ANAC58    <---------ANAC58 --------- ->ARR11(3)              <---------STY1(2)--------->ANAC58                 <---------ANAC58 --------- >AHL20(2)               --------->STY1(2)--------->ANAC58          --------->ATHB12<------ZmHOX2a(1)   ggagccaaataattgttgttagataatagctagtaagttttaccaagcatagaacttgagtacgtttggatgatttagcgagtgaaggatcctgacctga  6240300          <---------ICU4          <--------HAHB4          --------->ATHB51         --------->ICU4      <-------TEIL                                                                  --------->LBD16      --------->ZAT18                                                              --------------->AGL15 ---->HVH21                 <---------ARR14(2)                                     <---------------AGL15 ------->AGL15        <-----------GT1                                              --------->HSFB2a(2) ==================================================================================================MADS_MADS ---------AGL1    ------>MYB46(1) <-----------HVH21      ----------->GT1          ----------------->AGL2 ------>DOF2      ------>MYB83   --------->ANAC46 <-----------RAV1(2)             ----------------->AGL3 -------->AGL1  <---------MYB59  --------->bZIP60(2)   ----------->GT1      --------->YAB1 >At4g35610  <-----------GT1--------->ARR14(2)  ----------->RAV1(1)         <---------ICU4   aaaggaagtgcataattaccaaattttcagtatccatgtcacttcaaaaaccacagatggtgaaaaatcaattcgcaaacatcacccagaaatagaaact  6240400                                                                                       --------->TOE2(3)                                                                         --------->ANAC58                                        --------->YAB1                   --------->ANAC58                                     <---------ICU4                      --------->AtLEC2                                  --------->YAB1                --------->ANAC58      --------->YAB1                               --------->ANAC46                 --------->ANAC58     <---------ATHB12                            --------->GLK1(2)----------->GT1   --------->DAG2       --------->ANAC58                            <---------ARR14(2)                ---------->DOF2       --------->ANAC58                     ---------->DOF2--------->ICU4       --------->AHL20(2)--------->YAB1           ----------->HVH21--------->ARR14(2)         <----------DOF2   --------->ANAC46       <----   taagagcatcgatttgacaaatctaaagtgaatccgtcataatcaagaggtcaattcctttaaataaagcaattcaagcaaaacccaagcattaatcgac  6240500                  --------------->AGL15                  <---------------AGL15           <---------AHL20(2)           --------->AHL20(2)                        <---------ALFIN1          <---------AHL20(2)               ------>NtERF2                      ------>ZmHOX2a(2)          --------->AHL20(2)             --------->LBD16       --------->ANAC58    <---------ANAC58        ------->TEIL--------->ANAC46       --------->ANAC58                 <----    <---------ANAC58       <---------ARR14(2)     --------->ETT(2)   --------->ARR14(2)        ------ -----ALFIN1   <-----------GT1         <---------LBD16         --------->ANAC46       <<<<<<<<<TBF1   actcttgcctgattaaattacctcttgaagaaccttgttcttccgcgacttatcgacactcttgcaggcaaaatactcgatcgtcttcttcttccttcct  6240600                                                              --------->DAG2                                 <-----------GT1             ---------->DOF2      <---------At5g28300                             --------->AHL20(2)         <----------ID1           <-----------GT1  --------->ANAC46           <---------AHL20(1)         ----------->GT1       <---------ICU4 ------DOF2--------->ANAC46  <---------AHL20(2)        ----------->GT1    <-------TEIL --->TOE2(3)  ------->TEIL   --------->AHL20(1)      ---------->DOF2 --------->YAB1   ttatacacagtctacgaaccgatttgaacaataaattactaaacaaaacacttgagaaaggaaaaaagttatcagattcaaaattaccgagcatttgcca  6240700                                                                        <---------ARR14(2)                                                                    <---------LBD16                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                  --------->GLK1(2)                                                                 <---------ARR14(2)                                                                 <---------GLK1(2)                                                             --------->CCA1(2)                                                             --------->ARR14(1)                                                             <------ZmHOX2a(2)                                                            --------->AGP1                                                            --------->ARR14(2)                                                           --------->GLK1(1)                                                           <---------GLK1(1)                                                        --------->LBD16 --------->ARR14(2)                                                        ------>ZmHOX2a(1)                                 --------->TOE1(2)    <---------At4g35610                    <---------SPL7                    --------->At4g35610                   ---------                  --------->ALFIN1   <---------PCF2   ----------->RAV1(2)        --------->AGP1                  <---------------AtSPL3     <----------DOF2<---------ARR14(2)  <---------At4g35610                  <---------------AtSPL8   <---------ZAT2 ----------->ARR10 <-----------HVH21--------          <---------ANAC46  <-------TEIL   --------->At4g35610------>ZmHOX2a(2) <---------ZAT2-------         <-------TEIL   --------->ICU4   --------->ZAT18=============HOX2a_HOX2a--------->At4g35610   tgtccaatagcttcgtagatgtggtactgattcatcgtgggagcgagcttcaagtctcctgagatccgattctggatttgtcagctctagagagaatcaa  6240800    <---------MYB46(3)                                                                             --   <---------MYB52(1)                                                                              <-  <-------GAMYB                                                                                   --- <---------MYB46(3)                --------->ALFIN1                                               --- >GLK1(2)                  ---------->DOF2                                                      ----- ---->CBF            <---------ARR14(2)                                   <XXXXXXXXXXXXXXXXXXXXMIR826 -->ATHB12           --------->ARR14(2)                        ------------>CBF     --------->ZAT18<-   tggccgttgttgaatgagtttgggatttggaaagagagagggggaatggtagagagaaggaaatgaacaatttcaaaattcaaaactggactaatttaga  6240900      <---------AHL20(1)      --------->AHL20(1)      <---------AHL20(2)     --------->YAB1     --------->AHL20(2)    <---------YAB1  -------->ATHB1  <---------AHL20(2)  -------->HAHB4  --------->YAB1  <---------ICU4  --------->ATHB51                              <---------RAP2.6(3)  <--------HAHB4                          --------->GLK1(1) <---------ATHB51                         --------->CCA1(2) --------->ICU4                          --------->ARR11(3) <---------YAB1                          --------->ARR11(1) ------->YAB1                            <---------ARR11(3) --------ICU4                            --------->ARR14(2)                                         - ------>AHL20(2)                         <---------ARR14(2)                                       --- ------>ICU4                           ----------->ARR10          --------->AHL20(2)              <-- ---->YAB1                           --------->CCA1(2)            <---------AHL20(2)             ---- -------HAHB4                    <------ZmHOX2a(1)       --------->ICU4              <----------DOF2<   ataattattatattttgaatccattttgttttgaaggagataagatatgcagtcatatacttatgaaattaaaaatagttagatgggcttcttgggctca  6241000       --------->WRKY38(1)       --------->WRKY12      <---------MYB52(1)     <-------GAMYB    <---------MYB46(3)    ========================HOX2a_HOX2a                --------->ZAT14              ----------->HVH21    ------>ZmHOX2a(2)                                  <---------ZAT14             --------->At5g28300   <---------YAB1                             --------->LBD16                      --------->LBD16 --------->YAB1                               ------>NtERF2                     ------>NtERF2 -------->HAHB4                ----------->HVH21  --------->ICU4               --------->DEAR3(1) -------->ICU4               ----------->GT1 --------->ANAC58                 --------->DEAR3(2) ------>YAB1               <---------LBD16   --------->ANAC58                 --------->MYB46(3) -------ICU4              <---------LBD16    --------->ANAC46                <---------At5g28300 ----->ICU4          ------>ZmHOX2a(1)      <---------LBD16                 <-----------GT1        -- ---------YAB1   <-----------GT1         <-----------GT1       ----------->RAV1(1)<---------ANAC46---   taatgatcgttggcccatttatcctcttctcgggtgaaacgtttttcccgccataactatactgccaacagggtttttttaccgccgtgaaatgagaaga  6241100                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                          --------->ANAC58                    ------>NtERF2                                                          --------->ANAC55(2)                 <------                                                          --------->ANAC58                   <-------                                                          --------->ANAC46                  ---------                                                          <---------ANAC55(2)               ---------                                                          ----------->GT1                 <---------bZIP60(1)                                                          <---------bZIP60(1)             ===========                                                          --------->bZIP60(1)             --------->bZIP60(1)                                     <-----------GT1    ------>NtERF2                     --------->O2                                  <---------ARR11(3)   --------->DEAR3(1)  <---------ALFIN1<---------                                  <---------GLK1(2) --------->DEAR3(1)   --------->SPL7   <---------O2                           --------->ARR11(3)      <---------At4g35610  <---------PCF5    --------->TGA1a                       ---------->DOF2         ------>ZmHOX2a(1)       <---------SPL7     <---------TGA1a            <------NtERF2  <---------ARR11(3)  <-----------HVH21       --------->LBD16 ----------->HVH21 --------->GT1    --------->DAG2  --------->ARR11(3)----------->HVH21<---------LBD16   --------->DEAR3(1) -------->GT1    ---------->DOF2----------->ARR10  --------->At4g35610--------->DEAR3(1)------>NtERF2   ggggtaaacttggcagagaaaaagtgaaagagcttagattttccttctccttcagcgacgacgtaacattcgccggaccacatttatctccgacgtcggc  6241200  Previous    Next  AGI:  At5g18700.1    Description:  EMB3013 (EMBRYO DEFECTIVE 3013); kinase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33940.1); similar to hypothetical protein OsI_001219 [Oryza sativa (indica cultivar-group)] (GB:EAY73372.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71033.1); similar to hypothetical protein OsJ_001132 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11307.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPr Range:  from: 6235098    to: 6240735    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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