Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58           <-------TEIL                                --------->ANAC46         --------->ARR11(3)                            --------->ANAC58  <---------ARR11(1)                               --------->MYB52(1)  --------->GLK1(2)                         --------->CCA1(2)  ------->TEIL                              <------ZmHOX2a(2)  <---------ARR14(2)                       --------->ARR14(2)  --------->ARR14(2)                       --------->ARR11(3)                   <---------At4g35610  <-----------ARR10                        --------->AGP1                 <---------AtMYB61 <---------ARR14(1)                        <---------ARR14(2)       --------------->AGL15 <---------CCA1(2)                         <---------ARR11(3)      <-----------------AGL2    -------- --------ANAC58                           --------->GLK1(1)        <-----------------AG  --------->ARR14(2) --------ANAC58        <---------MYB59    <---------GLK1(1)    <---------MYB52(2)        <---------ARR14(2) -----DOF2--------->CCA1(2)    ---------->DOF2  --------->ANAC46  -------->P    --------->At4g35610   tgcgaatctaagatacagaagtttaccaaaatccaaagaaacagagatccacataacaggccaaaactaacctgttttggtttgctgagaaaatccccag  6182400                                                                    <---------O2                 ====                                                                --------->DEAR3(2)              <----                                                            --------->ANAC58         <---------STY1(2)                                              <---------At4g35610   <---------bZIP60(1)  <---------ZAT2                                              --------->At4g35610   --------->O2     --------->STY1(2)                                              <---------ZAT2--------->ANAC46       ------>ZmHOX2a(1)<                                              ----------->RAV1(2)   --------->bZIP60(1)  <---------At4g35610      ----------->GT1                         --------->ZAT2--------->ANAC58   --------->ARR14(2)---- ->LBD16                             --------->ICU4      ------->TEIL          <---------ARR14(2)<---   taacaaaatagtgaatagaatcaatttcagagaatagccattatccacagctggagacgaacccgaaacgacgtcgtagtgaatcctagcaagctgtttc  6182500          <---------ZAT2          --------->ZAT2          <---------ZAT14          --------->ZAT14     <---------At4g35610     --------->At4g35610     --------->ZAT2     <------NtERF2     <---------ZAT2    ----------->RAV1(1)   <-----------RAV1(2)   --------->ATERF1(2)   <---------ATERF1(2)                           <---------DOF5.7(2)  --------->ATERF1(1)       --------->ALFIN1     --------->MYB52(1) ------>NtERF2        <---------WOX13(1)       <---------MYB52(2)                           --------- ==============RAV  -------->HAHB4            <---------At4g35610                          <---------YAB1 -----LBD16         --------->ATHB12          --------->At4g35610             --------->ANAC58    <-- ---------PCF2     <---------YAB1     <---------WOX13(1)                      --------->ANAC58   <--- ----->HSFB2a(2)   --------->ICU4  ----------->HVH21           <---------AHL20(2)   --------->AHL20(2) --------RAV1(1)   <---------ATHB12--------->ALFIN1 ------->GAMYB         <----------DOF2  <---------ATHB12   tggggccagcagagcagggaaatgattgaaggggggagtgatggatttagctaacggaagcatataaaaatgttgtctttaagcaaataactaatgaatg  6182600                                      <---------ZAT2                                  ------>ZmHOX2a(2)                     --------->ARR14(2)                     <---------ARR14(2)                     --------->GLK1(2)--------->ZAT2                     ------->TEIL--------->At4g35610                     <---------ARR11(1)                    <---------CCA1(2) <---------At4g35610         <---------At4g35610    <---------ARR11(3)     <---------ZAT14 >ATHB12 --------->At4g35610    --------->ARR11(3) <---------HSFB2a(2) -------PCF2        <---------ARR14(1)--------->At4g35610                               <---------CCA1(2) -------ID1   ---------->DOF2 --------->ICU4       --------->HSFB2a(2)        ---------->DOF2       <   ggaccaagttcagcacaaaagcgaatcttgtaatgatctgagcttagcccgttcgagagtagagactagagacagagagagaaagagaccgtctcttgat  6182700                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                   <---------CCA1(1)            <---------MYB52(1)                            <---------WOX13(1)       <---------RVE1(1)           <-------GAMYB                                --------->ATHB12          <---------ARR14(2)          --------->MYB52(2)                           <---------YAB1             --------->ARR11(3)          <---------MYB46(3)                     --------->ANAC58                 <---------ARR11(3)         <-------TEIL                            --------->ANAC58               ----------->ARR10      <---------MYB46(3)                     --------->ANAC46                --------->DEAR3(1) ----------DOF2         ----------->RAV1(1) <---------LBD16    *TSS      --------->ZAT18          ---   gtctttgatggttcgttgagttatggcaacatgttttgtctgtttctgcgcaagtatgtgattggagtttacgagttcgccgaagatatttaatgctcgc  6182800                  --------->PCF2                 <-----------HVH21                 <---------PCF2                 --------->TCP20                 --------->TCP15(1)                <---------TCP23               <---------MYB46(3)            <-----------RAV1(1)          <----------DOF2       ------>NtERF2      --------->ANAC58 <---------At4g35610      --------->DEAR3(1)    <----------DOF2                    --------->YAB1      --------->ANAC58 <---------ZAT2               <---------CCA1(2)     --------->ATERF1(1)<---------GLK1(2)       <------ZmHOX2a(2)                             <------    <---------ATERF1(1)--------->ZAT2 --------->ARR11(3)   --------------->AGL15         <----------DOF2   ----------->HVH21  <---------TOE1(2)  <----------DOF2  ----------------->AGL3      <-----------GT1 ------>ARR14(2)<---------TCP15(2)    <---------ARR11(3)<----------DOF2   <----------DOF2<---------DAG2   gatttgcgacgcctttgtgggtcccagcttcttttgaaaatgtcttttcgatccatctctttcaaatatagtaagactttgctagtttttacttttttac  6182900                                                                                                  <--        --------->AHL20(2)         <---------AHL20(2)                                        --------        --------->YAB1    <---------AHL20(2)                                                 --------       <---------YAB1 <---------AHL20(2)                                          <-----------HVH21     --------->YAB1   --------->AHL20(2)                        --------->ANAC58 --------->ANAC58 ---    <---------YAB1--------->AHL20(2)                            --------->ANAC58 --------->ANAC46 --- -----GT1    ----------->GT1<-----------GT1       <----------DOF2                --------->ANAC58----   attgtttttataatatagtataaattatataaactattttaaaaatttagtgattttaggggaaacaagaaaaacagagtcacaagtcacagcaataaaa  6183000         --------->AHL20(1)                                                                  --------         <---------AHL20(1)                                                          <---------DAG2         <---------AHL20(2)                                                          <----------DOF2  ----------->GT1      --------->At4g35610         <---------WRKY12               <-----------GT1 -------AHL20(2)     --------->YAB1     --------->AHL20(2)                    <---------RVE1(1) ->AHL20(2)  <-------TEIL<---------------AGL15   --------->TOE1(3)      --------->MYB52(1) <--------- ->YAB1  --------->AHL20(2)            --------->AHL20(2)        --------->ANAC46 <---------AHL20(2) ------>AHL20(1)    <---------ATHB12   <---------AHL20(2)   <---------AHL20(2)<---------CCA1(1) ------>AHL20(2)  --------->YAB1   >>>>>>>>>>GT-3b--------->DOF5.7(2)  <---------ATHB12   --------->TOE2(3) ----->AHL20(2)--------->TOE2(3)----------->GT1  --------->TOE2(3)     <---------ATHB51<-----------GT1   aaaattgttaataaattcattaatcatctacatgaagaaaaataaataaaacgtcaacttaatttataggcaaataatggatatttactttacctttgac  6183100                           <-------GAMYB                          <---------ANAC46                     ----------->GT1                          <---------ANAC58                   ---------->DOF2                          <---------ANAC58                <---------ANAC46                      --------->ARR11(3)                <---------ANAC46                    <---------TOE2(3)                  <---------MYB52(1) --->HVH21    --------->ICU4  <---------MYB46(3)      <-------GAMYB                    --------->ICU4 -DOF2        <---------YAB1<---------MYB52(1)       <-----------RAV1(1)           <---------MYB52(1)   aaatgacaaatggattattattaagatgtcgttggctactagtttcaagtttttgctgttgtgtaaagtcaaatattgatttttcggtaatttttgtccg  6183200                                                                             <---------YAB1                                                                            <---------AHL20(2)                                                                          <---------AHL20(2)                                                                        <---------AHL20(2)                                       --------------->AGL15           <---------ARR11(3)                 <---------YAB1        <---------------AGL15           --------->AHL20(2)               <--------HAHB4       <-----------GT1                    <---------AHL20(2)              <---------YAB1       <<<<<<<<<<GT-3b                     --------->ARR11(3)    <-------         --------->DAG2      --------->YAB1                            --------->AHL20(1)    <-------        ---------->DOF2      --------->TOE2(3)                         <---------AHL20(1)   <-------TEIL   agccctccaaaaaagtattattagtttgcaatcttatttttcttcatttagtatattagtttatgcaggtcaatatatttttatttcatagaagttcgta  6183300  Previous    Next  AGI:  At5g18590.1    Description:  kelch repeat-containing protein. similar to ACBP4 (ACYL-COA BINDING PROTEIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.1); similar to ACBP4 (ACYL-COA BINDING PROTEIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71009.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 6178356    to: 6182763    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18600.1    Description:  glutaredoxin family protein. Identical to Monothiol glutaredoxin-S2 (GRXS2) [Arabidopsis Thaliana] (GB:Q8L8Z8); similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G15680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71010.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin-like, plant II (InterPro:IPR011905); contains InterPro domain Glutaredoxin subgroup (InterPro:IPR014025) Range:  from: 6183260    to: 6183956    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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