Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------bZIP60(1)                               ------>NtERF2                              --------->ATERF1(2)         <---------RAP2.6(3)  <---------ATERF1(2)                   --------->DAG2      --------->ZAT14       --------->At4g35610                ----------->GT1            ---------->DOF2      <---------ZAT14       <---------At4g35610            <---------ZAT14             --------->AHL20(2) -------->ANAC58        --------->ARR14(2)                 --------->ZAT14       ----------->RAV1(1) -------->ANAC46        <---------ARR14(2)               <---------At4g35610  --------->ANAC58 -------->ANAC58<---------ANAC58         --------->bZIP60(1)--------->MYB52(1)--------->ANAC58 -------->AtLEC2<---------ANAC58<------NtERF2            --------->At4g35610---------->DOF2      >>>>   acatgcaatgcagtcatttcttgtccaatccgctggcaaattgacatcagggaagttgcagcaaactgaaaaattggagaaagcaacattttaaaagaaa  6149400                                                             ------>ZmHOX2a(1)                                                          =============HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                         <---------ANAC58                ------->TEIL               <----------DOF2                           <---------ARR14(2)               --------->GLK1(1)                    --------->MYB52(1)              <---------ANAC58                 --------->ZAT14            --------->ZAT18         ---------->DOF2 <---------ANAC58      <---------ZAT18          --------->ANAC46    ----------->GT1    <---------YAB1          <---------ZAT14         ---------->DOF2   ----------->GT1    ------->MYC3             <-------TEIL------>ZmHOX2a(2)       <---------ANAC58   <---------ZAT6     <-------MYC3             --------->ZAT18  ------>ZmHOX2a(1)  <---------ANAC58<- >>>>>MYB2    <---------ANAC58     <---------ICU4  --------->ICU4 --------->AHL20(2)    <---------MYB59   accaagtgttaaaaaggctttccatatgcttgaatgagcattacagaggtgcactaatggatcctcctataaataaggcactgatgcatgcctaacaatg  6149500                           <---------ZAT18        <-----------------AGL3                    ---------                        ------->GAMYB    <---------At4g35610                 <---------ALFIN1      --                     ----------->RAV1(1) --------->At4g35610              <-----------GT1   ---------                    --------->ANAC46    <---------TOE2(3)       --------->WOX13(1)        <---------PCF2 --------GLK1(1)  <-----------GT1--------->AHL20(2)<----------DOF2     <----------DOF2 --------->ALFIN1   gaaataccaatagaacaatttcacaacagagcccttaaaattaagctaaatctctttttttggagtcaatcttctttcaccacttaagagtgggacgctc  6149600                                                                                ----------->GT1                                   <---------YAB1                   <----------ID1                              --------->ANAC46                    ---------->DOF2                            <-----------GT1              --------->YAB1        ----------->GT1 >ANAC58                 <---------YAB1  ------>ZmHOX2a(1)  ---------->DOF2  ---------->DOF2   ------ --------->HVH21      <---------YAB1  <---------YAB1    <---------ZAT6  ---------->DOF2    --------->YAB1 >ANAC58       <---------ARR11(3)<---------ICU4 ---------->DOF2  ------------------------>ANAC81   agtgacaacttaaacaaggtcatcttgattatacatcattatccttccctcaaagttactgataaagaaaaagaaaaagaaaaggaaaatcaagaatacc  6149700                 <---------GLK1(2)           --------->ZAT6        <---------ALFIN1       --------->LBD16      --------->ANAC55(1)                                *TSS      --------->ICU4      --------->ANAC46                                  ------>MYB46(1)      --------->ANAC58                                  ------>MYB83      --------->ANAC58                                ------->GAMYB<---------YAB1            --------     <---------LBD16                                  ----------->HVH21             ------------>CBF   <---------ARR14(2)           --------->ARR11(3)    --------->DEAR3(1)        --------->AtMYB61   --------->PCF2<---------ARR11(3)                  --------->DEAR3(2)      --------->ANAC58--------   --------->ARR14(2)           <---------ARR11(3)   --------->MYB46(3)      --------->ANAC58--------  <------ZmHOX2a(1)  <-----------GT1               --------->MYB52(1)   <----------ID1       <------- ----->RAV1(2)   --------->ARR11(3)               --------->MYB46(3)--------->YAB1 ----------->RAV1(1)   tgaaggacccgcaactctagatttttctgcataagaactcttacatgtaggcacaaccgaccctatgtgatgataagacaaaccacaacaatagaacgaa  6149800   <------MYB83   <------MYB46(1)   <---------ANAC55(2)   <---------ANAC55(1)   --------->ANAC55(2)   <---------ANAC46                                           --------->At4g35610  --------->MYB111(1)   ---------->DOF2                       <---------ZAT2  --------->MYB59    ----------->GT1          <-----------GT1 <---------At4g35610 ->ANAC58       --------->DAG2         <---------AHL20(2)   <---------WRKY38(1) ->ANAC58      ---------->DOF2        --------->AHL20(2)    <---------WRKY12 --->GT1   <---------TOE1(3)        >>>>>>>>>GATA-1       <-----------HVH21 ---ID1    <---------TOE2(3)      ----------->GT1--------->YAB1          --------->ANAC46   aaattaggtgtttaacgtaaagctagtaaagatagatagataaaattttaaacatactttggtcagctcatgtatgagcaactcgtctgatataagagca  6149900                         --------->YAB1                        <---------ATHB12                                                          ---                      --------->WOX13(1)                                                          ---                  --------->MYB59              ------>MYB46(1)                                -------              --------->ATHB12                 ------>MYB83                                   -------             <---------YAB1         ---------->DOF2                                 <------ZmHOX2a(2)   actagaccatcgagtgtgattaggcaatcagacagcgctaaagaacaccaactatgaacaggctctggttttttcatcgaagagagatcgatacagaagc  6150000                       --------->GLK1(2)          <---------------AGL15          <---------HSFB2a(2)         ============================================================================================         <-----------------AGL3         ----------------->AGL3         ----------------->AGL2         ----------------->AGL1                                         --------->ZAT6         <-----------------AGL1                                       <-----------GT1         <-----------------AGL2                                   ----------->GT1 ------>ANAC58       <---------At4g35610     --------->ANAC46    --------->DAG2    <---------ATHB12 ------>ANAC58       <------NtERF2           --------->ANAC58   ---------->DOF2  --------->WOX13(1) -->ANAC58--------->HSFB2a(2) ----------->HVH21             --------->LBD16      --------->YAB1 -->ANAC58--------------->AGL15              --------->ANAC58--------->LBD16    --------->MYB46(3)   aaacaacatgttccagtaatggcagcatctgtttgacaatgaagttcacgcccaatagtctccctgaaaagttaacaatacaacaatcacttagcaaaat  6150100                                            <---------SPL7                                            --------->ZAT18                                           --------->ALFIN1                   --------->DAG2         --------------->AtSPL8                   <---------TOE1(3)      <---------------AtSPL8                   <---------TOE2(3)     <---------ANAC58              <---------ZAT6         <---------ARR14(2)           <--------P   <---------AtLEC2 <---------ANAC46        --------->LBD16<-------TEIL  --------->ARR14(2)                   <---------ATHB12       <-----------RAV1(2)      ----------->RAV1(1)          <---------ALFIN1           <----------DOF2       --------------->AGL15 ------->TEIL<---------ANAC58--------->MYB46(3)<---------ICU4     ------- ======================MADS_MADS--------->MYB52(1)      -------->P --------->WOX13(1)   <---------DAG2   atgaaatttccaggtagagctaaggtgcatgaatcaacagatagggtgtaccaattctaaccagcacatcaatcccatcagtacatattccttttccgaa  6150200                                                                          ----------->HVH21                                                                        --------->bZIP60(1)                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                        <---------O2                                                                        <---------ANAC55(2)                                                                        ======================bZIP_DOF                                                                        <---------bZIP60(2)                                                                        --------->TGA1a                                                                        --------->O2                                                                        <---------bZIP60(1)                                                                        <---------ANAC58                                                                        --------->ANAC55(2)                                                                        <---------TGA1a                                                                        <---------ANAC55(1)                                                                     ----------->HVH21                                                                    <-------MYC2                                                                    <-----------HVH21                                                                    ------->MYC2                                                                    ------->MYC3                                                                    <-------MYC3                                                                   --------->O2                                                                   ===========================bZIP_DOF                                                                   --------->TGA1a                                                                   --------->ANAC58                                                                   <---------TGA1a                                                                   --------->ANAC55(2)                                                                   <---------ANAC55(2)                                                                   --------->ANAC46                 <                                         <---------At4g35610       --------->ANAC55(1)              <                                         --------->At4g35610       <---------O2                 <----                --------->ZAT14     --------->ANAC58               --------->ANAC58            ------     <---------YAB1                 --------->ANAC58               --------->bZIP60(2)      --------- -->LBD16       <---------ZAT14<----------ID1                    ------------->DYT1---------->DOF2  -   gtaacttatcaatggcagtatagtctgtattaagggacaagtcagcatccaaataagaaattcagaaacacgtgacgtgcccgatgaaaggcatatatat  6150300  Previous    Next  AGI:  At5g18525.1    Description:  WD-40 repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO70907.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 6146745    to: 6149757    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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