Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->GT1                                   <---------ANAC58                        --------->ZAT14                                   <---------ANAC58                 --------->YAB1                                 <-----------GT1                   <---------ATHB12                                 <---------AHL20(2)               ------>MYB83                             --------->AHL20(2)                   ------>MYB46(1)              <-----   --------------->AGL15--------->YAB1        ---------->DOF2 >>>>>>>>>MYB2<---------ZAT14    -------   tctatctatttatcgaaaaacttcaatgagattatttacttgcataaacaaagttttgagagaaaaccaaacatcagaatagtgaaacaaatggcattaa  6138100                --------->AHL20(2)                <---------AHL20(2)          --------->YAB1                                                     <---------ANAC46      --------->AHL20(2)                                              ---------->DOF2    <---------WRKY12      <---------AHL20(2)                                         --------->DAG2          <---------WRKY38(1) ----AHL20(2)--------->YAB1                                     ---------->DOF2          <---------WRKY45 -->AHL20(2)<---------YAB1         --------->YAB1             --------->AtMYB61<---------ANAC46   tttgacatttatttataataaaacagacccaaaacaaacatatgttcaacaatttcatttaagaccaaaagtaaaagagttgtgtatttagtcaacgaga  6138200                                  <-------GAMYB                               <---------MYB52(1)            <--------P                              <-----------HVH21           --------->MYB59 --------->ZAT14                    <-----------GT1                       <---------TOE2(3)                   ------>ZmHOX2a(1)                 --------->MYB52(2)   --------->REM1(1)   <---------TOE1(3)     <----------DOF2  ----               <---------MYB52(1)--------->MYB52(2)  <----------DOF2   <<<<<<<<<TBF1 <-----------GT1   tttagtttgacattcccattagttacacactctgtcagttacaacaagattaaaactttttaggttagtcttcttcttcactctttttatccattcctca  6138300                                                                                                    <                                                                      <----------DOF2               -                                                                      <---------DAG2                -                                                                <---------ETT(2)                    <                                                              <-------GAMYB            --------->ANAC46                                                             <---------MYB46(3)        --------->ANAC58                                                             <---------DEAR3(2)        --------->ANAC58                                                            <---------DEAR3(1)--------->STY1(2)    <-                                                         <---------ANAC58     <---------STY1(2)    --                                                         <---------ANAC58  <---------ANAC58        <-       ---------->DOF2                        ----------->HVH21 <---------MYB46(3)   ---------->DOF2- ----->ANAC46     <---------DAG2       ---------->DOF2   <---------ANAC46  <---------ANAC58    ------   caaaaccaaaaaagtcttcacctttgcaccaaaaaaaaaaaaaaagtcttgacattgtttcgtcggtcgtcacttttgctagctaataaaagccagaata  6138400           --------->ARR11(3)           <---------ARR11(3)         <---------AHL20(2)        --------->AHL20(2) <------------CBF ---------ICU4 -------->ATHB51 ------->HAHB4 --------ATHB1                                     --------->At4g35610 --------AHL20(2)                       <------------CBF                    <---------ICU4 ------->AHL20(2)                      --------->ATHB12                    <---------ATHB12 --------ATHB51        <----------DOF2 --------->ATHB51          ---------->DOF2 -------->ATHB12    <-----------GT1   <---------YAB1          ----------->GT1              <-------TEIL --->AHL20(2) <----------DOF2<-----------GT1       <---------At4g35610 ------------>CBF    *TSS    <-   aataattggattaaatcttttttttcttttcttactgtttattattggaacacagctacaaggagggtaaagcttcaatctttcccactcacattcattt  6138500                                                                           ----------------->AGL1                                                                          --------->CCA1(2)                                                                          <------ZmHOX2a(2)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                            --------->ARR11(3)                    <----------DOF2                         <---------ARR14(2)               <---------DAG2                               --------->ARR14(2)               <----------DOF2                              <---------ARR11(3)              <---------ANAC58                <---------MYB52(1)         --------->AGP1              <---------ANAC58               <-------GAMYB --------->GLK1(1)           <---------WOX13(1)         <----------DOF2      <---------GLK1(1) ---------->DOF2         --------->ATHB12           <-------TEIL--------->MYB59 =================HOX2a_HOX2a        <---------YAB1          <---------TOE2(3)<------MYB46(1)------>ZmHOX2a(1)        <----------DOF2      <----------DOF2   <-----------GT1     <---------MYB46(3)------>ZmHOX2a(2) --------->ZAT2 -----------------------ANAC81  <---------TOE1(2)<------MYB83<------ZmHOX2a(2)  <---------ZAT2   <---   tctctggtctttgattgcttttcttttcactgcttaggttctttgtctgttaggtttagagagatcctttccaaagatccaaagctggaaactttctagt  6138600                      ---------->ID1                  <----------DOF2              ----------->HVH21             ------>ZmHOX2a(2)            --------->At4g35610            <------ZmHOX2a(2)            --------->CCA1(2)           --------->AGP1           <---------ARR14(2)                                           <------MYB83           <---------AGP1                                               <---------MYB46(3)           <-----------ARR10                                            <------MYB46(1)           --------->ARR14(2)                                           <---------DEAR3(2)           <---------ARR11(3)                                          <---------AtMYB61           --------->ARR11(3)                                          --------->MYB59    --------->At4g35610                   --------->GLK1(1)           <--------P    <---------At4g35610        <-----------RAV1(1)                <-----------RAV1(2) ------WRKY38(1)  <---------DAG2          <---------GLK1(1) --------->PCF2                  ------->TEIL   caatgctgcttaagatctgactttttcccttcaatgtcgctctgaaatcccctaaatttttgggcccatcaggttggttcttctctcacttatgaaccct  6138700                                                                                  <---------ZAT14                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58                                                <---------ANAC46        <---------ARR14(2)                                                <---------ANAC58        <---------GLK1(2)                                                <---------ANAC58        --------->ARR14(2)       --------->YAB1                     <----------DOF2            <---------ANAC46   <---------YAB1                        <---------MYB52(1)       ----------->HVH21   <---------YAB1   agtttctaattgtaagttcaattcttgaatttctctagactctgttttttgggtgtttatcagacaatgcgacggatttttgtgtgttctgaatagtttc  6138800                                                                     <------MYB83                                                                     <------MYB46(1)                                                                    <---------AtMYB61             <--                                                                    --------->MYB59             -----                                                                  <-------GAMYB               -------              <---------AHL20(2)                                  <---------MYB52(1)          -------          <---------CCA1(1)                                     <---------ANAC58              <------          <---------RVE1(1)                                    <------NtERF2                  <------NtERF2         <---------ARR11(3)                                --------->ZAT2                     <------         --------->ARR11(3)                                <---------ZAT2                <---------HSFB2a(2)       ----------->ARR10                 <----------DOF2   --------->At4g35610        --------->GLK1(2)     <-------GAMYB           <---------ZAT2                <---------At4g35610       --------->KAN4(2)    <---------DEAR3(2)       <---------At4g35610     <---------ZAT6<---------MYB55(1)<---------ARR14(2)   <---------At1g77200       --------->At4g35610 <---------ZAT14<---------ANAC46    <---------KAN4(1)   --------->ETT(1)          --------->ZAT2      --------->ZAT14<---------ANAC58    --------->KAN4(1)   tattgtcggtagatattttttagttttcttcagctgtagttttctttccagcgtagtgtttagctggcgtttggtctgagaactgaatattctggcagct  6138900                                                                                                 <---  --------->ICU4                                                                         <---------ANAC58 ----NtERF2                                                                              <---------ANAC58 ---->ATERF1(2)                            ------->TEIL                                  <---------ANAC46 -->ZAT2                    <-----------RAV1(1)                                    <----------DOF2 -->At4g35610     <-------TEIL  <------MYB46(1)               <----------DOF2<---------ANAC58   <---- ---At4g35610 --------->MYB59   <------MYB83                  ------>ZmHOX2a(1)  ---------->ID1 <---- ---ZAT2      <---------TOE2(3) <---------MYB46(3)         ---------->ID1    <---------ANAC58--------   ggcaattcttgggacttaggtacaaatacaatgttggttttgttgaatctgatttttcttagtccttttttgttcaatttcttgtctttttgcttgttcc  6139000  Previous    Next  AGI:  At5g18500.1    Description:  protein kinase family protein. similar to GPK1 (Glyoxysomal protein kinase 1), kinase [Arabidopsis thaliana] (TAIR:AT3G17420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70924.1); similar to putative receptor-like protein kinase 3 [Glycine max] (GB:AAU10525.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 6138491    to: 6141632    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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