Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <----------DOF2                                                --------->TOE1(3)                                          --------->ANAC58                                          --------->ANAC58                                      --------->ANAC58                                      ------------------------>ANAC81                  --------->WOX13(1)  --------->ANAC58                                        ------- ->ZAT14         --------->MYB46(3) ---------->DOF2    ---------->DOF2         --------->At4g35610 --ZAT14  <----------DOF2         --------->YAB1--------->TOE2(3)              <---------At4g35610   taatcttctctactttccatccatcagcctatagaatcaaaagcaaacaactttaaacaaagcagtatgtgatcaaatttaagctcaaactcaatcgaaa  6133500                        <---------------AGL15                        --------->YAB1                        ===================================================MADS_MADS              <----------DOF2             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->AGP1                     ------>MYB83           <---------AGP1                   <---------MYB59<---------------AGL15           <---------ARR11(3)               --------->AtMYB61                               ---------           --------->ARR11(3)         --------->YAB1       --------------->AGL15           --------->AtMYB61      <----------DOF2   --------------->AGL15 ------>MYB46(1)      --------->ZAT14  --------->YAB1 --->DOF2 <---------CCA1(2)           --------->AHL20(2)<-----------GT1          --------->AtMYB61   ggagaactctttagatctttaaactactataactagacaataaaaaccaaaccttgagtaacttcttagagtagtctgagacaccatcagaaaccaaagc  6133600                ------>ZmHOX2a(2)               >>>>>>>>>>>>>>>>>LFY               <------ZmHOX2a(2)              --------->ARR14(2)              <---------ARR14(2)                                                                    <       ================HOX2a_HOX2a                                                        --------->ANAC46       ------>ZmHOX2a(1)             --------->ANAC46                                     --------->ANAC58      --------->TOE2(3)     ------->TEIL                                              <---------bZIP60(1)      --------->TOE1(3)  --------->ANAC58                                          ----------->HVH21<   <---------ARR14(2)    --------->ANAC58                                        --------->ALFIN1   -   --------->ARR14(2)    <---------ANAC55(2)                                     ----------->GT1<----   <---------ARR11(3)    --------->ANAC55(2)              --------->YAB1     ---------->DOF2    <----  <---------CCA1(2)  <-----------HVH21       --------->TOE1(3)     --------->At4g35610--------->bZIP60(1) ->DOF2===============HOX2a_HOX2a  <-----------GT1    ------>ZmHOX2a(1)  --------->AtLEC2 --------->ANAC58   gaccatatccttagtggatccagtgtcacgaatcgatttacccaataccctaactcctaataagaactcatctccatacaaaagtgtgacataagctact  6133700                                                                                                  ===               --------->MYB52(1)                                                                 ---          --------->AGP1                                                                         ====          --------->ARR14(2)                                                                     ----         --------->At4g35610                                                                     <---         <---------At4g35610                                                                    <---- ---------ANAC58           <-----------GT1                                                      <---- ---------ANAC58 <---------MYB52(2)                                                             <---- -------->ANAC55(2) ------->TEIL                                                                ----- ------DOF2<------ZmHOX2a(2)                                                                   <----- -----DAG2<---------ARR14(2)                                 --------->LBD16                <--------   ttacttgattcagatccaaacgaaccatttaactgaattgaaacgagggcaaggagaagaacccagagactcgtcttgagtctcaccatagttattcgga  6133800        --------->HSFC1(1)        <---------HSFC1(1)             --------->ARR14(2)        --------->HSFB2a(2)       ---------->DOF2 ==============================HOX2a_HOX2a --->ZmHOX2a(2)         ------>ZmHOX2a(1) ==============================HOX2a_HOX2a ----->GLK1(1)          <---------------AGL15 ---ZmHOX2a(2)          --------------->AGL15 -------ARR10          <---------MYB59 <---------ARR14(2)  <---------GLK1(2) -----AGP1             ----------------->AGL3              --------->ARR11(3) -----ARR14(2)    ------>MYB83 <---------TOE2(3)           <---------ARR11(3) ---->ARR14(2)    ------>MYB46(1)<------ZmHOX2a(1)       <---------TOE2(3)       <---------MYB46(3) ----CCA1(2)  >>>>>>>>>MYB2    <---------TOE1(3)         ----------->ARR10     <---------ANAC46 -LBD16 <---------HSFB2a(2) <---------AHL20(2)    ----------->GT1           <---------MYB52(1)   tctcaattttctcgaaaaccaaattcctaatttaaggaaagtatacgttgaattgaaataagattttgaattttcttcgttgtttgttctgtctgtgtct  6133900                            <---------MYB52(1)                            <------NtERF2                           ------>NtERF2                          --------->RAP2.3(2)                          --------->DEAR3(1)                          --------->RRTF1(3)                          --------->RAP2.3(3)                         --------->RRTF1(1)                         --------->RAP2.3(1)                                                      ---                         --------->ERF1                                                           ---                        ------>NtERF2                                                      <------ZmHOX2a(2)                        --------->ABI4(1)                                                 <---------ARR14(2)                       --------->DEAR3(1)                                                 <---------GLK1(2)                      --------->MYB46(3)                                                  --------->ARR14(2)                      --------->ATERF1(1)                    --------->SPL7               --------->ARR11(3)                      --------->DEAR3(2)                     ------>MYB83                 <---------ARR11(3)                  <-----------HVH21                        --------->TOE1(2)              --------->AGP1               <---------ANAC58                            --------->TOE2(2)           <---------HSFB2a(2)               <---------ANAC46   --------->HSFB2a(2)   <-----------GT1                --------->HSFB2a(2)        <----------DOF2--------->ANAC46             <---------YAB1               <---------ARR11(3)        *TSS   <---------ANAC58   <---------HSFB2a(2)--------->YAB1           ----------->RAV1(1)<---    <---------ALFIN1 <---------At5g28300           <-----------TBP         --------->AtMYB61------>ZmHOX2a(2)  --------->AtMYB61 <-----------GT1          ---------->DOF2 ------>MYB46(1) --------->ANAC46 ------>ZmHOX2a(1)   gaaacctcacctttgttccttgtcaccgccgtcgttttagaaaccgagaaagtttttataacctacgacgaagtctaccacaacatattctagatcctta  6134000      <---------YAB1    -------->HAHB4    -------->ATHB1    <--------HAHB4    --------->ATHB51                            ------->MYC3    --------->YAB1                              <-------MYC2    <---------AHL20(2)                          ------->MYC2    <---------ICU4                              <-------MYC4   <---------YAB1                  ----------->GT1  --------->ZAT18   --------->ICU4       ------>ZmHOX2a(1)       <-------MYC3   <---------ATHB51 --------->ARR14(2)        <-------TEIL                                ----------- ------>TOE2(3)     <---------ARR14(2)    --------->DAG2                      <------ZmHOX2a(1)------ ------>YAB1      <---------DEAR3(2)    ---------->DOF2                     <---------TOE2(3) ------- ------YAB1   --------->ANAC46     <---------ANAC55(2)           <----------DOF2--------->GLK1(2)----   tgttaattattaaactacgtcgtttcctcgtttcgataagtaaaaaggcacatgttcactaatccaactttgatcacttaggaatctatctatctgtacc  6134100                                                                    <---------TOE2(3)                                                                    <---------YAB1                                                                 <---------YAB1                                                                 <---------WOX13(1)                                         <-----------GT1      <---------ATHB12                                  <---------ZAT6              --------->ICU4                                  ----------->GT1             <---------YAB1                           --------->AHL20(2)           <------ZmHOX2a(2)                           <---------AHL20(2)          --------->ARR11(3) ---->AtSPL8             --------->AHL20(2)            <---------ARR11(3) --->ANAC46             --------->ARR11(3)     <---------ANAC58-------->HAHB4 >TEIL<----------DOF2   <---------AHL20(1)     <---------ANAC46--------->ATHB12                   --- ------->HVH21          <---------ARR11(3)     <---------ANAC58----------->GT1                   ----   tcacatggatttaagggcaatttgaatatatatatagagttaataacaggcttgtaagatcgaaatgattaatattgaatccaaaatttgtatacaattt  6134200        --------->AHL20(2)        <---------AHL20(2)      <---------AHL20(2)      --------->AHL20(2)    --------->AHL20(2)                                                                              <    <---------AHL20(2)                                          <---------GLK1(1)                  --  --------->AHL20(2)              --------->ANAC46              --------->At4g35610               <-- ------------>AGL15            <-------TEIL--------->DAG2       --------->GLK1(1)          ------>ZmHOX2a(1) ------------->AGL3     <-----------GT1   ---------->DOF2     <------ZmHOX2a(1)       <---------At4g35610   ccatatatatatatatacacacttatttacacatacacttagcaaaaagcttcactgaaacagaggagctctgttttcaacaaatttcatctccttccca  6134300                                       --------->DAG2                                      ---------->DOF2                                <---------ALFIN1                               ------>ZmHOX2a(1)                            ------>MYB83                            ------>MYB46(1)                          <---------MYB59                                        --------->ATHB12                         <---------HSFB2a(1)                              ===========================HOX2a_HOX2a          <----------DOF2--------->HSFC1(2)                               ------>ZmHOX2a(1)         -    ------>ZmHOX2a(1)    <---------HSFC1(2)                              --------->TOE2(3)          < <---------YAB1          --------->HSFB2a(1)                         <---------GLK1(1)             -- -----------GT1         --------->ARR11(3)                      ---------->DOF2--------->GLK1(2)  <-- ------->YAB1          <------ZmHOX2a(1)          <------ZmHOX2a(1)  --------->GLK1(1)        <------ZmHOX2a(2) -------ATHB12    ------>ZmHOX2a(1) --------->At5g28300  <---------GLK1(2)===========================   attatccttctcctttggtcctgtaggaccttcctcaccgtaaagctcaataggaaacagactctcaaaagaattcctcagaatcagtggaagtagatca  6134400  Previous    Next  AGI:  At5g18480.1    Description:  PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G08990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65058.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 6131205    to: 6133908    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40557.1); contains InterPro domain Protein of unknown function DUF946, plant (InterPro:IPR009291) Range:  from: 6134154    to: 6136767    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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