Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ANAC58                      <---------                                         <---------ANAC58                                <-------TEIL                                         <---------ANAC58            <---------O2      <---------SPL7               ----------->GT1           <---------ANAC46            --------->TGA1a  <---------ANAC46              --------->DAG2       <-----------RAV1(1)    <-----------GT1          --------->ANAC46        --------->AHL20(2)        <---------YAB1     --------->ANAC58<---------TGA1a --------------->AtSPL8 ------TEIL ---------->DOF2 <---------TOE2(3)        ----------->GT1 --------->O2<-----------GT1   attcgttcattttaaaaaggtaaaacaattttggttattgttgtcttgtatagacaagttatacaattcacacgagtcgaattttacgacgtacaagtac  6122500                                                                                                 ----                                                                         <----------ID1          <---                                                                         ----------->GT1    <--------         <---------------AtSPL8                                      ---------->DOF2        ---------         --------------->AtSPL8                         --------->AHL20(2)         ---------->DOF2 ------AtSPL8------->TEIL        ---------->DOF2        <---------AHL20(2)    ---------->DOF2  <-----   aataccaaaaatatgtactcttacatttttggctataaagtattttctaagttggaatttaaattttagaaaaaagagaaaaaagaaaagagtagtgaca  6122600                                                     <------MYB46(1)                                                     <------MYB83                                                    <---------AtMYB61                                                    --------->MYB111(1)                                                    --------->MYB59                                                    --------->MYB46(2)                                                   <--------P                                                 <---------ANAC58                                                 <---------ANAC46                                                 <---------ANAC58                                                 <------MYB83                                                 <------MYB46(1)                                                --------->MYB59                                                <---------MYB46(3)                                             <-------GAMYB                                            <---------MYB46(3)                                     <-                                            --------->MYB111(2)                           <----------DOF2 ----->At4g35610                            --------->MYB46(2)                        <---------ANAC58 ------At4g35610                            --------->MYB52(2)                        <---------ANAC58 -ZAT6                 ---------->DOF2      --------->MYB111(1)                   <----------DOF2  -- -->HVH21    <------ZmHOX2a(1)            <---------MYB52(1)                  <-----------GT1     --- ------RAV1(2)    ----------------->AGL3 ------------>MYB.PH3(2)           <------------------------ANAC81   gatgaaaacattgaaggagtgtcataaaagggaagaaaggtttagttagttgggtaggtctctctattgtatttatagtttttcctttgcttctttttca  6122700            <---------DAG2            <----------DOF2       <---------MYB52(1)       <----------DOF2                                              --------      --------->TOE2(3)        <---------ANAC58                                              <-------      --------->TOE1(3)        <---------ANAC58           <---------AHL20(2)               <--------- --------AHL20(2)     <---------ATHB12             <-------MYC3                          <---------AHL20(2) ------->AHL20(2) <---------AHL20(2)               ------->MYC3   <---------ICU4        <---------AHL20(2) ------>AHL20(2)  --------->AHL20(2)            <---------ALFIN1  --------->ATHB51  <----------DOF2--   tttatttcccttaactttattttaatcaattttgctttagtctctctcacacacatgtataaaatgaataatttctcatcttctctcttttttatttata  6122800                                                                     --------->YAB1                                                                     *TSS                                                                   ------->TEIL                                                                <---------YAB1         <---------HSFB2a(2)                 <---------AHL20(2)                          <---------YAB1            --------->HSFC1(1)                <---------AHL20(2)                         <---------ICU4              --------->HSFB2a(2)    ---------->DOF2              <---------AHL20(2)        --------->YAB1              <---------HSFC1(1) ->YAB1    --------->ANAC58      ----------->TBP          <---------ATHB12      ------>ZmHOX2a(2) --AHL20(2)--------->ANAC58    ----------->TBP            --------->ICU4      <---------ARR11(3) --TBP<----------ID1  --------->WOX13(1)    ------------>CBF --------->ICU4   --------->ARR11(3) ---- -------->DOF2  --------->AHL20(2) <---------AHL20(2) ------------>CBF  --------->ATHB12       ------   agaaagaaaagacaagaattaaatctatcaactatataaaaatgaagccaatgcagggcaatgatgatgaatcttgatttgatcttcttctcgaaaacct  6122900                                                          --------->O2                                                         ------>MYB46(1)                                             <---------ARR11(3)       <---------At4g35610                   --------->ARR11(3)    <---------At4g35610                     --------->CCA1(1)                                 <------  <---------ANAC58                  --------->ANAC46     ------>MYB83                     --------->ARR11(3)  <---------ANAC58                --------->ZAT6        <---------ALFIN1                  <---------ARR11(3) ----->ATHB12                   <-----------GT1        --------->MYB46(3)                --------->AHL20(2) --->TOE2(3)                 <---------ICU4 --------->RVE1(1)               --------->YAB1--------->AHL20(1)   cattgcttctgcttcttctcttccatttccatatttacacttcataatatctcttcacccacttctcttcttccccatttataactcacaaatatataca  6123000                                                                   <---------------AGL15                                                                   --------------->AGL15                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <---------ANAC46                                                                  <-----------------AGL2                                                             <---------------AGL15                                                             --------------->AGL15                                                            <-----------------AGL1                                                            <-----------------AGL2            <------                         <---------STY1(2)                  ----------------->AG              <------              <---------ARR11(3)                            ----------------->AGL1      <---------DAG2              --------->ARR11(3)                    --------->ARR11(3)                  --------->TOE2(3)             <---------CCA1(2)                     <---------CCA1(2)                    --------->TOE1(3)         <---------AHL20(2)           --------->YAB1<---------ARR11(3)            ------>ZmHOX2a(1) -TEIL   --------->AHL20(2)           ----------->GT1    <----------DOF2       ------>ZmHOX2a(1)   --   tactcttacatttatatatcttgggctagctaagtagctatagtaattttctaatatctctttccatttcttgaaatggtcctcctctcaccttaacttt  6123100                  <---------TOE1(2)                  <---------TOE2(2)          --------->AtMYB61    --------->At4g35610   <---------ARR14(2)   <-----------ARR10   --------->GLK1(2)   --------->ARR14(2)  <---------GLK1(2)  --------->GLK1(1) ----DOF2 <---------ALFIN1           <----------DOF2                                   --------->CCA1(2) ---DAG2 --------->MYB46(3) <---------GLK1(2)   <---------LBD16                   ---------->DOF2 ------->YAB1    <-----------RAV1(2) <---------DAG2               <-------TEIL >>>>>>>>>TBF1    <----   ataagaatctgaccacctctcaggtttccagtttcttcactttctcgttctctggacactgaatgtgatacatatatagaagaagaaagctataagagat  6123200                                                                                                    -                                                                                          --------->ARR11(3)                                                    <---------YAB1                        <----------                                                 <---------------AGL15                    <---------ARR11(3)               --------->KAN4(2)                 --------------->AGL15           <-----------HVH21 <- ------>ZmHOX2a(2)                         <----------DOF2                 <-----------RAV1(2)  ----- -----WOX13(1)<---------KAN4(1)            <---------DAG2           <----------DOF2      <---------CCA1(2)   tgatcgatggaggtgaatgttcttgcatccaagagaagtcttctcctttttcttcttattgtaagtctctctttgagccagaaggtcagacatatctctg  6123300            ------>MYB46(1)            ------>MYB83          <---------MYB46(2)          <---------MYB111(1)                          ---------->DOF2          --------->MYB46(3)                        ------>ZmHOX2a(2)          --------->AtMYB61                      <------ZmHOX2a(1)         --------->ANAC58                    <---------ANAC58     <-----------TGA1                        <---------ANAC46                                       -    --------->ANAC46                         <---------ANAC58           <------ZmHOX2a(2)          <-  <-----------GT1                 <---------ANAC58 <------ZmHOX2a(2)    ====================HOX2a_HOX2a  <---------DOF5.7(2)             <---------ANAC46<---------ARR14(2)   <---------ARR11(3)          <- -------->DOF5.7(2)               <---------ANAC58--------->ARR14(2)   --------->ARR11(3)         <-- -ARR10 ------>NtERF2         <---------At4g35610==============================HOX2a_HOX2a <--------- ---------DOF2           --------->ANAC58<---------ANAC58--------->ANAC58            ------>ZmHOX2a(1) ->NtERF2--------->ANAC58--------->ANAC58<---------ANAC58--------->ANAC58          ----------->RAV1(2)   cctttaacgacaccaaaccatacagacaagtcagtagcttgagacttgcgaggatccaaaagcacttgaacaagatcaacaagtctcctgtcttcaccat  6123400  Previous    Next  AGI:  At5g18460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23340.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23340.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO38766.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 6122869    to: 6126723    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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