Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------At4g35610                                    --------->CCA1(2)                                    <------ZmHOX2a(2)                                   <---------ARR14(2)                                   --------->ARR14(2)                        ---------->DOF2                                   --------->ARR11(3)           <---------YAB1           ------------                                   --------->AGP1       <---------ARR11(3)--------->ANAC58      -----                                 ----------->ARR10<-----------GT1         --------->ANAC58--------->ANAC58 <-------GAMYB     <---------At4g35610  <-----------RAV1(2)     --------->ICU4   <------ZmHOX2a(1) ---------ANAC46<---------At5g28300<---------ARR11(3)   <---------AHL20(1)--------->ANAC46--------->ANAC58 ----ICU4      <-----------GT1 ---------->DOF2  --------->AHL20(2)    <-----------GT1 <-----------GT1   tttcgttgaaacttattttactgctaacttaggcaaagatccacaggtgattaaacaatatatgtgataattttacacgaaaaggatttaacaagaaata  6104600                 ------>ZmHOX2a(1)                 <----------DOF2             --------->ARR14(2)     <---------ICU4     --------->YAB1     --------->AHL20(2)                              ----------->GT1     --------->ATHB51                              ---------->DOF2     <--------ATHB1  --------->HSFB2a(2)         --------->LBD16              ---------->DOF2    --------->ICU4   <---------HSFB2a(2)        <---------HSFB2a(2)         ------>ZmHOX2a(2)    <---------ATHB12 --------->HSFC1(1)         --------->HSFB2a(2)        <------ZmHOX2a(2)    <---------ATHB51 <---------HSFC1(1)        <---------LBD16            <---------ARR14(2) --->AGL15   <---------ARR14(2)             ------->TEIL                  --------->ARR14(2) ------>GT1 <---------CCA1(2)               <---------GLK1(1)            <------ZmHOX2a(1)   gaaacaataatttcatatcctttctagaagaaaattttgaaatatgaactccggaaagaaaatttgtagtcaaaaggatccaaagacccacaatttctaa  6104700                                                                                          <---------LBD16                                                                                         <---------O2                                                                            --------->ANAC58                                                                            --------->DREB2C(2)                                                                            ------->GAMYB<---------ZAT2                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                           --------->DEAR3(2)                                                                           --------->MYB46(3)                                                                           <------------AtMYB77                                                                          <---------ATERF1(1)      <-                                                               ----------------->AGL1    --------->At4g35610                                                  --------->At4g35610    --------->ARR14(2)       <--                                                  <---------ZAT2         <---------ARR14(2)--------->HSFB2a(2)              <---------GLK1(2)        --------->GLK1(2)       <-----------------AGL1    ----------->RAV1(2)        --------->ARR11(3)         <------ZmHOX2a(1)        <---------ANAC58--------->DEAR3(1)-------        <---------ARR11(3)       <---------TOE2(3)--------->ZAT2        <------ZmHOX2a(1)<---------At4g35610        --------->GLK1(2)   --------->ZAT6        <---------At4g35610   =============================    <---------MYB59      <-----------GT1       ----------->ARR10 ------>ZmHOX2a(1)   <-----------HVH21 <-----------GT1       --------->HSFC1(2)    ---------->DOF2<---------ANAC58--------->RAP2.6(2)   ---   attttaccaaaatctagaatatcgaagttacctctaaggagaatgtggaaagagctgcgattgcttcctctacaggaaccgccattgagtcacctggaaa  6104800                                                                     ----------->RAV1(1)                                                                    --------->MYB46(3)                                                                  ------>MYB46(1)                                                                  ------>MYB83                                                                --------->MYB46(3)       --------->ANAC58                                         <---------MYB59       --------->ANAC58                --------->DAG2          --------->ANAC58           --------->At4g35610 -----ZmHOX2a(2)               ---------->DOF2                 --------->ANAC46           <---------ZAT2 -------ARR11(3)           ------>NtERF2   <----------DOF2     --------->ANAC58           <---------At4g35610 --->DOF2 --------->WOX13(1)   --------->MYB52(1) <----------DOF2 ----------->RAV1(1)  ----------->ARR10 =====HOX2a_HOX2a  --------->ATHB12<------ZmHOX2a(1)  <---------TOE1(3)               <------ZmHOX2a(1) ------>ARR11(3) ----------->RAV1(1)  ---------->DOF2 <---------TOE2(3)          <------ZmHOX2a(1)   gatcagacgaagcaattagcaacattgggcgactaaaggataaagctttcaactttaaggctcttacccaacaacaatggagaggagaggagagctgcta  6104900                            <---------YAB1                                                          -                          <---------At4g35610 --------->GLK1(1)       <-----------HVH21             -                     <----------DOF2 <---------LBD16 --------->AHL20(2)           *TSS    ---------->DOF2                    <---------DAG2<----------DOF2----------->GT1 --------->ZAT14------>MYB46(1)     <             --------->ATHB12 <---------GLK1(2) <------ZmHOX2a(2)<---------ZAT14------>MYB83        <   ctacttcaagtcaattgattcgcctttcttctgattctttacggacagagatcgataaattcgctactactctgtccgaaccaaatatttcgcaaagttg  6105000                                                                                  -------------------                                                                                <---------GLK1(2)      <----------DOF2                                                        --------->YAB1  <----------DOF2                                                            --------->HSFB2a(2) -------->HSFC1(2)                                                       <---------DAG2 -------->HSFB2a(1)                 --------->AHL20(2)                <-----------GT1 ---------HSFC1(2)      <---------HSFB2a(2)              ------>ZmHOX2a(1)<----------DOF2 ---------HSFB2a(1)     --------->HSFB2a(2)   <----------DOF2       <-----------GT1     <----------DOF2   gaagctttctttttctatttgtttttctgtaacaaaaaaaaaatgtttctttttgggtcctcgtttgtattttcacctttcagaatttttctttagtaca  6105100                                                                                   --------->AHL20(2)                                                                                   --------->ATHB51                                                                                  --------->ICU4                                                                                  <---------YAB1                                                                                --------->YAB1                                                                                <---------ICU4                       --------->HSFB2a(2)                                     <---------ATHB12  <---                       <---------HSFB2a(2)                               --------->At4g35610     <---               ---------->DOF2  <---------ICU4                           <---------At4g35610    ----- ---->TaNAC69(2)    <----------DOF2            <----------DOF2      ----------->HVH21  <-----------GT1   tatttgttcaatccgattaaagctttgagaagaagcattacatttgtgtctttactatgaagcaaacttgatgacagctaaatcattatttactgattcc  6105200               --------------->AGL15               <---------------AGL15              <-----------------AGL3        <---------ATHB12    ------>ZmHOX2a(1)                                                                      --------->MYB46(3)   --------->TOE1(3)                                                            <---------At5g28300   --------->TOE2(3)           <---------ANAC55(2)                             <-----------GT1   --------->ANAC46           <-------TEIL                         <---------AHL20(2)   --------->MYB46(3) -------DOF2  <-----------------AGL1                               --------->AHL20(2)--------->ZAT14 ------DAG2   <-----------------AG            --------->ANAC46   --------->CCA1(2)   <---------ZAT18 ---->TOE2(3) <-----------------AGL2 ----------->GT1            <---------ARR11(3)   <---------ZAT14   tttatcctcaaccatttcttattttgggaaaatacataagagtaataccagtaacaaaacaaaatagatataaatacaattttacagtgaacaactactg  6105300                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                               ------>MYB83             <------MYB83                                                      --------->TOE1(3)                 <------MYB46(1)                                                      --------->TOE2(3)                <---------AtMYB61                                                    ------>NtERF2  --------->LBD16    <--------P                                                   --------->ARR14(2)               --------->ALFIN1                                               <---------LBD16 ------>MYB46(1)      <-----------RAV1(1)                         ----------->GT1     <-----------GT1  --------->WOX13(1)================RAV              <----------DOF2          <---------TOE1(3)     --------->AtMYB61 --------->ZAT2           <-----------GT1        <----------DOF2--------->LBD16 <---------LBD16<-----------RAV1(2)  --------->AHL20(2)  --------->GLK1(2)<---------TOE2(3) ---------->DOF2       <---------ZAT2      --   aacataaaataagttactttgtagaatcagtaacaacttttaaggtttaaccggagccttaaaccaatccggataagaaccagcaggtgttggtgctatc  6105400                                --------->MYB52(2)                            <---------ZAT6                          <---------ANAC55(1)                          <---------ANAC46                          <---------ANAC55(2)                          --------->ANAC55(2)            ------>NtERF2                       <---------MYB52(1)                <---------RAP2.6(3)                      --------->At5g28300               <---------ANAC46                      <-------GAMYB                     <---------ANAC58                  <---------DOF5.7(2)                   <---------ANAC58                 <---------REM1(2)               <------ZmHOX2a(1)                          ---------                <-----------HVH21            ---------->DOF2                                --------- ------->ALFIN1 --------->DOF5.7(2)     --------->MYB52(1)          -------->P     ----------->GT1   ggtgtgagcatgtaaaccgttcacggttaagtgttagtagcctaatggaaaggacatgccgtctaagtctaaccagaaatttttgttgtaaaaacatatg  6105500  Previous    Next  AGI:  At5g18410.1    Description:  KLK/PIR/PIR121/PIRP (KLUNKER, PIROGI); transcription activator. Identical to Protein PIR (PIR) [Arabidopsis Thaliana] (GB:Q5S2C3;GB:Q3E9F2;GB:Q6DLU3); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ50112.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38781.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ82082.1); contains InterPro domain Cytoplasmic fragile X mental retardation protein interacting protein (InterPro:IPR008081); contains InterPro domain FMR1-interacting (InterPro:IPR016536) Range:  from: 6097300    to: 6104982    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18420.1    Description:  similar to unknown [Picea sitchensis] (GB:ABK25419.1); contains domain UNCHARACTERIZED (PTHR15975) Range:  from: 6105482    to: 6109387    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version