Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ANAC46                         --------->bZIP60(2)                       --------->AtMYB61                       <---------ALFIN1                      --------->ANAC46                    --------->ZAT6               --------->ANAC46               --------->ANAC55(1)               ----------->GT1               <---------ANAC55(2)               --------->ANAC58               --------->ANAC55(2)                                  <---------ARR14(2)               --------->ANAC58                              <---------YAB1       ---------->DOF2           --------->MYB52(1)                              --------->YAB1   --------->ANAC46          ----------->HVH21       ----------->HVH21       <-------TEIL  ------>ZmHOX2a(1) --ICU4 <---------At4g35610      <-----------HVH21    <---------YAB1--------->ARR14(2)             -- -YAB1  --------->At4g35610     --------->ANAC46    <---------At4g35610--------->TOE1(2)       ------   gctaaaacagagctaacaggtaacaccacatcatccgtcacagccaaaacagtcttctgattcatcatcgaatcctacaaaccaaaaaacccaaaaacat  6094600                                                                                                <----                                                                                    ---------->DOF2                                                                        <----------DOF2        <-----                                                                        <---------DAG2         ------                                     --------->ANAC58            <---------YAB1   <---------------AGL15                               <------ZmHOX2a(2)               <----------DOF2    --------->TOE2(3)                              <---------ARR11(3)    --------->DAG2     <---------ANAC58  --------->ANAC58                              --------->ARR11(3)   ---------->DOF2     <---------ANAC58  --------->ANAC58 -------->DOF2     <---------AHL20(2)--------->ANAC46      --------->MYB46(3)     --------------->AGL15 --->TOE2(3)       --------->AHL20(2)--------->ANAC58    --------->MYB52(1) <-----------GT1    <-----   taaaagactaaactttgaaaataaaatccacagatcatcaagctacaaacacaaaaagctaacaacttttattgctttttacaacctaaagaagcaattt  6094700                                                                ------>MYB83                                                                ------>MYB46(1)                                                                ----------->RAV1(1)                                                              --------->MYB46(3)                                                              ------->GAMYB                                                             --------->ANAC58          --------->ARR11(3)                                 --------->ANAC58          <---------ARR11(3)                                -------->P      --------->LBD16                                       --------->ANAC58     --------->LBD16                                        --------->ANAC58    <---------HSFB2a(2)                                 --------->ANAC46    --------->HSFB2a(2)                                 --------->ANAC58   <---------LBD16            ------->TEIL              --------->ANAC58 -----AHL20(2)             <---------ATHB12            <---------LBD16 ----AHL20(2)        --------->ANAC58              <---------GLK1(2)                      <-------TEIL --->AHL20(2)        --------->ANAC58              --------->ARR14(2)        ---------->DOF2 -------- ----AHL20(1)        --------->AtLEC2        <---------AHL20(2)--------->ANAC46          --------->CCA1(2)   ttttctcccgaagctcttatgacatgcaaatgaatcaagagaaacaaataatcgattcgcgcaacccaacacaaggctaaaaagtttagagatacacaaa  6094800                                      <---------AHL20(2)                                     <---------AHL20(2)                   --------->ICU4                                     <---------AHL20(1)                 --------->TOE2(3)                          --------->WOX13(1)                  --------->TOE2(3)                     --------->MYB46(3)              ----------->RAV1(1)--------->YAB1               <------ZmHOX2a(1)     --------->AHL20(1)       --------->TOE1(3)        <---------AGP1------->GAMYB  --------->AHL20(2) ------->GAMYB  ----------------->AG   --------->GLK1(1) <---------MYB52(2)              --------->MYB52(1)----------------->AGL1 ->ANAC46 ------>ZmHOX2a(2)  --------->YAB1     --------->CCA1(2)     -------->P   --------->GLK1(1)   aacagaaatcgatctgaggaacaacaaacaatcagaaaataaaattgaagatagacaacagaaacattaacttaccataatggagaaatctatgtaaaac  6094900                                                                                          <----------DOF2                                                                                         *TSS -------                             <---------AHL20(2)                                      ----------->HVH21                 --------->TOE2(3)     ----------->GT1                         --------->ARR11(3)                 --------->TOE1(3) <---------At4g35610                         <-----------ARR10     --------->ARR14(2)      --------->AHL20(2)                                <---------ARR11(3)     <---------ARR11(3)    --------->AHL20(2)                                  <---------ARR14(2)     <---------ARR14(2)   --------->AHL20(1)                   <------ZmHOX2a(1)   ----------->RAV1(2)     --------->ARR11(3)   <---------AHL20(1)          <----------DOF2          --------->ARR14(2)     <---------GLK1(2)   --------->AHL20(2)     <---------ANAC58              <---------CCA1(2)   ----------->ARR10   --------->AHL20(2)       <---------ANAC58   --------->YAB1  --------->At4g35610   ctcgcgagatactcaaaaaccctaaaaatatatatatagctgtgtaaattgtttgcctttgaagaggaataagaaaaatcaaatcttctgacctttgtct  6095000                                                                      <---------WRKY38(1)                                                                   ----------->GT1                <---------ARR11(3)                                 <------MYB46(1)                --------->ARR11(3)         <---------ANAC58        <------MYB83               <---------CCA1(2)      <----------DOF2    ---------->DOF2                         <---           <-----------TBP       <----------DOF2<---------ARR14(2)--------->MYB59               -----       <---------ANAC58     ------>NtERF2  <---------ANAC58 <---------LBD16 --------->LBD16--------->GLK1(1)       <---------ANAC58    --------->DEAR3(1)   --------->ARR14(2)<---------AtMYB61<---------ANAC46     ------>NtERF2 <----------DOF2    <---------DAG2  <----------DOF2--------->WRKY18(1)   <---------GLK1(1) --->ID1<----------DOF2   --------->ORA47(2) <---------TOE1(2)  <---------MYB52(1)<---------TOE2(3)   ctctcgctggcttttttatatctttttcgccgactctttccttttccttggttctgctataacgcggtttggtcaaaccgggtttacgtagagaaatcag  6095100                                                                        <-------TEIL                                                                       --------->ARR14(1)                                                                       --------->CCA1(2)                                                                      --------->ARR14(2)                                                                      --------->ARR11(1)                                                              --------->YAB1                                                             --------->DAG2                                                            ---------->DOF2                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)          --------->MYB52(1)                           <---------ARR14(2)--------->ANAC58           < ---ZmHOX2a(1)                                         --------->ARR14(2)--------->ANAC58           - ------>GT1    <-----------HVH21                   <-------TEIL       <---------ARR14(2)<---------ALFIN1   gaaaaaaaaaaaaaacgggttacccgattgtttattgtgttttttaaaacgggttcggatccaaaagtaatagatacggcccatttagacacacgggctt  6095200                                                                  ----------->GT1                                                           <---------------AGL15        ----------->TBP                                                     <---------DOF5.7(2)                --------->AHL20(2)             <---------YAB1                        <---------MYB52(1)                   <---------AHL20(2)       --------->AHL20(2)                          --------->DOF5.7(2)                ----------->TBP       <---------AHL20(2)                         --------->TOE1(3)            ---------->DOF2------- ---------ZAT18                        <---------TOE2(3)   --------------->AGL15  ----------->GT1 <-- -------->ZAT18                   <----------DOF2 --------->TOE2(3)     --------->TOE2(3) <---------AHL20(2)   agtgcccattttaatatgaaaaaaaaaaaaaaactacttttaagaaaaaaaacgttaactactgtattttgtaacataaataaaaggtatatatatatga  6095300                                <------ZmHOX2a(1)                                        <---------ANAC55(2)                              <---------TOE2(3)                                     --------->YAB1     --------->ZAT6           <---------TOE1(3)                             --------->TOE2(3) ---->HVH21        --------->YAB1                               <-----------GT1    <-------TEIL    -- ----------CBF   --------->AHL20(2)                     --------->MYB52(2)  --------->YAB1    -------   cattgtgacactatctcatattaataacttctaaggaaaacaaaatgaagacaattgtttgtttcttaactattctaatcttagtttcatcatgtaagta  6095400                                      <-----------GT1                                    <---------AHL20(2)                                 <--------ATHB1                <---------AHL20(2)                                 --------->ATHB51              --------->AHL20(2)                                 <---------ICU4<---------AHL20(2)              --------->GLK1(2)                                 --------->AHL20(2)            <---------AHL20(1)                                 <---------AHL20(2)         --------->YAB1     --------->ARR11(3) ---    --------->TOE2(3)           <---------ATHB51            --------->AHL20(2)--------->YAB1  -------  <-----------GT1         <---------CCA1(2)    <-----------GT1 --------->AHL20(1)             ------- ------->YAB1            ------->TEIL--------->AHL20(2)  --------->YAB1    <---------ICU4    <------- -->ICU4  --------->TOE2(3)     <---------ATHB12  <----------DOF2          --------->YAB1  --------->YAB1   tttataacttaatcttagaatcaaacgtatatcaataatttaactatattttctttctctaataatattttagttaataataatcttgttgtataataat  6095500  Previous    Next  AGI:  At5g18400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18362.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15382.1); contains InterPro domain Protein of unknown function DUF689 (InterPro:IPR007785) Range:  from: 6092684    to: 6094989    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18403.1    Description:  contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 6095345    to: 6095717    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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