Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                 <---                                                                  <---------YAB1             --------      --------->MYB46(3)          <----------DOF2              <---------------AGL15       <---------    --------->MYB52(1)  --------->ATHB12    <----------DOF2    --------------->AGL15--------->At4g35610  <---------MYB59      <-------TEIL   <-----------GT1---------->DOF2---------->DOF2 <---------At4g35610   ttagcctaacaactcttcttctatattcattagtttcttttttcatctttcttagaaaagtttttcttataaaagtttaatctttcttctgcctgtcatt  6017500   ------>ZmHOX2a(1) ------->ARR14(2)                                <---------ANAC46 ------MYB46(3)                                  <------MYB83 --------->YAB1 ->ATHB12                                        <------MYB46(1)                             -------- --HVH21     ----------->HVH21   --------->YAB1 --------->MYB59 --------->ICU4     ------------>CBF   ggttcctctcaacatttgacactgaatagttgtaatgacaaagttttagttgggttttagacaaaaatgatcaacattctaacaaaacaatataagaact  6017600                                            <---------TOE2(3)                 --------->HSFB2a(2)                   <---------------AGL15   ---------->DOF2              --------------->AtSPL8    --------->GLK1(2)                     <---------AHL20(2)   <---------MYB52(1)   <---------GLK1(2)               --------->At5g28300      ------>MYB83<---------------AtSPL8     <- ----------->ARR10 <---------YAB1 ----------->GT1----------->GT1  ----------->GT1<---------GLK1(2) -- ->ARR11(3)       <-----------------AGL1  --------->AHL20(2)------>MYB46(1)   <---------HSFB2a(2)  --   agttagattctggctctagttctcattctggttacacagtaaaattaaagatggagataacctcccttaagtaaaatgtactagaattttgagaagtcca  6017700                   <------NtERF2                   --------->ATERF1(1)             --------->SPL7              <------NtERF2            --------->MYB52(1)    --------->MYB52(1)          ------>NtERF2            --------->ARR14(2)    ---------->DOF2       ---------->DOF2           <---------SPL7     --------->ZAT6            --------->MYB52(1)                          <          --------->LBD16   ----------->RAV1(1)     --------->ZAT6                                  < --------->TOE2(3)<-----------HVH21      <---------MYB52(1)  --------->DEAR3(1)                     - --------->TOE1(3)------>NtERF2 <---------MYB52(2)----------->RAV1(1)    <---------ARR14(2)         - --------ARR11(3) <---------ATERF1(1)   ------>NtERF2 <---------MYB52(2) --------->ARR14(2)       --- ------->GLK1(2) <---------DEAR3(1)     <-----------HVH21    --------->RAP2.3(3)                  <-- ------->ARR11(3)--------->DEAR3(1)    --------->DEAR3(1)   --------->ORA47(2)                  <----   aaatcttaaaccccgaacggcgtcgcttagcaacactaacgccgtcgtttagcaacactaacgccgacttgttcagttccacagtcaaaactcaaaacag  6017800              <---------DOF5.7(2)              --------->MYB52(1)             <---------WRKY38(1)            --------->WRKY18(1)       <---------ALFIN1   <-----------HVH21      --------->YAB1 ---------ZAT18      <---------ARR11(3)           ------>MYB83                              --------- ---------ZAT14      --------->ARR11(3)           ------>MYB46(1)                         --------->LBD16 -------->ZAT14      --------->ARR14(2)      <---------WRKY18(1)        ------>ZmHOX2a(1) ----------- -------->ZAT18      <---------ARR14(2)     --------->WRKY38(1)        --------->TOE2(3)  <---------SPL7 ------>ZAT14<---------WRKY12           <---------ANAC58           <---------ANAC58      --------->DEAR3(1) -------ZAT14<---------WRKY45   ------------>CBF<---------MYB59    <---------ANAC58     <---------LBD16 -----------AtSPL8 ----------->ARR10    <---------ANAC58      <---------AtLEC2   ------>ZmHOX2a(1)   agtacagtcacacagtcaacgaagatactaataagtcaattttcgtttgaccaaatttgattcttcatggcttcctcagtctcctctctcgccggacgag  6017900                                                                       --------->ARR11(3)                                                                  <------NtERF2                                                                 ------>NtERF2                      -                         <---------ARR14(2)                     --------->DEAR3(1)              -----                         --------->ARR14(2)                    <------NtERF2                   <-----                     <---------LBD16                           --------->RAP2.3(1)            -------             <---------ARR14(2)                               <---------ATERF1(1)             <------             <-----------ARR10                               <---------DEAR3(1)               <------             --------->ARR14(2)                              ---------->CDC5                  -------            <---------MYB52(1)   <------NtERF2            <---------ZAT2                --------->AtMYB61        --------->MYB52(1)--------->ARR14(2)              --------->ZAT2             --------->ANAC46 >SPL7 <---------WRKY38(1)<---------ARR14(2)            ------>NtERF2  <---------ARR11(3)----------->RAV1(1) >HVH21<-----------GT1 --------->LBD16                 --------->DEAR3(1)            --------->REM1(1)   tcgcgatagtcaccggttcttctcgcggaatcggccgagctatagccatacatctcgccgagctcggcgccaagatagtcatcaactacaccaccagatc  6018000                                                   --------->LBD16                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->HSFB2a(2)                                                  <---------ANAC55(2)                                                  --------->ANAC58                                                  --------->ANAC55(2)                                                --------->SPL7                                               --------->ARR14(2)                                               <---------ARR14(2)                                               <---------MYB52(1)                                              <---------SPL7                                            <------NtERF2                                           ------>NtERF2                                          --------->DEAR3(1)                                          <---------ALFIN1                                         <------NtERF2                                         <---------ABI4(2)                                        <---------DEAR3(2)                                        ------>NtERF2                                        --------->LBD16                                        <---------ATERF1(1)                                       --------->RAP2.3(3)                                       --------->RAP2.3(2)                                       --------->DREB2C(2)                                       --------->ANAC46                        --------->GLK1(1)--------->ATERF1(1)                    <------NtERF2      --------->DEAR3(1)                   --------->LBD16     --------->RAP2.6(2)                   --------->At4g35610 --------->RRTF1(2)         <---------ANAC46                   <---------At4g35610 <---------DEAR3(1)        <---------MYB52(1)                   <------NtERF2       --------->ATERF1(2)       <------NtERF2                   ------>NtERF2       <---------ATERF1(2)      <-----------HVH21 --------->ARR11(3)                  ----------->RAV1(1) --------->RAP2.3(1)       ------>NtERF2     <---------ARR11(3)                 <---------LBD16      --------->ATERF1(1)       --------------------->WRI1                 --------->ATERF1(1)  <---------LBD16          --------->DEAR3(1)--------->GLK1(1)    ------>NtERF2<------NtERF2        --------->ERF1        =====================HOX2a_HOX2a  ------- -------->DEAR3(1)--------->DEAR3(1)  --------->ORA47(2)    ------>ZmHOX2a(2)    <---------CCA1(2) ---->MYB46(3)   --------->RAP2.3(1) ------>NtERF2<---------HSFB2a(2)      --------->ANAC46   ------- -ZmHOX2a(2)    <---------RAP2.3(1)  --------->LBD16       ======================HOX2a_HOX2a  ------>MYB83 -->AGP1 <------ZmHOX2a(2)           <---------ATERF1(1)   <------ZmHOX2a(2)     <---------GLK1(1) ---ARR14(2)    <---------ORA47(2)  --------->ANAC46      --------->ARR14(2)    <---------MYB52(1) ---ARR11(3)    <---------ATERF1(1) ------->GAMYB<---------LBD16<---------RAP2.6(3)           ------- -->ARR14(2)   <---------DEAR3(1)  --------->MYB46(3)  --------->MYB46(3) ------>ZmHOX2a(1)   ------>MYB46(1)   caccgaggccgatcaagtcgccgcagaaatcaactcatccgccggcaccgttccgcaaccgatcgccgtcgtgttcctcgccgatatctcagaaccaagc  6018100                           ---------->DOF2                        <------NtERF2                       --------->LBD16                      <---------ANAC46                      <---------DEAR3(1)                     <------NtERF2                                          ------>ZmHOX2a(1)                     <---------LBD16                                       --------->TOE2(3)                     --------->ATERF1(1)                                <---------ARR14(2)                     ------>NtERF2             <-------TEIL       <---------At4g35610                    <---------ATERF1(1)       <-----------HVH21   ----------->RAV1(2)          ------                   <---------DEAR3(1)       <---------MYB46(3)    <---------ZAT2              -------                  ------>NtERF2             <---------DEAR3(2)    --------->At4g35610        -------- -->ANAC58       --------->ANAC46          <---------TOE1(2)      --------->ZAT2             ------>MYB83 -->ANAC58       <---------O2              <---------DEAR3(1)   <-----------RAV1(2)    <-----------GT1 -->ANAC46    ----------->HVH21  <----------DOF2       ------>ZmHOX2a(1)--------->ARR14(2)   ------>MYB46(1)   caaattaagtctctcttcgacgcggcggagaaagcctttaactcgccggttcacatcctagttaactcagctggaatcctcaatcccaattaccctacca  6018200                                                                                               <-----                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                         --------->ICU4    <---------ALFIN1                                                                  <---------YAB1  ------>NtERF2                     --------->ANAC55(2)         <---------YAB1       --------->AHL20(2)  ----------->RAV1(1)               --------->ANAC58            <---------AHL20(2)   <---------AHL20(2) --->AtMYB61                        --------->ANAC58       <---------AHL20(2)       --------->YAB1 -->MYB46(3)                        --------->ANAC46    ----------->GT1             --------->AHL20(2) >P --------->ZAT6        ------>ZmHOX2a(2)        <----------DOF2             <---------TOE2(3)  <--   tcgccaacactcccattgaagaattcgatcgcatcttcaagtaatcgaaaaaactttatagttaatttcattgtagagattaagaattaaaattatgatt  6018300                                                                                              <------ZmHOX2a(1)                                                                                             <------MYB83                                                                                         <---------MYB46(3)                                                                                         --------->MYB55(2)                                                                                        --------->ALFIN1                                                                                        <---------AtMYB61                                                                                       <------NtERF2                                                                                       <-------GAMYB                                                                                      <---------DEAR4(2)                                                                                     <---------DREB2C(2)                                                                               --------->ALFIN1                                         <---------YAB1                       <-------MYC3   <------MYB46(1)                                        --------->KAN4(2)             ----------->GT1--------->ALFIN1          <-------GAMYB                <---------KAN4(1)             ----------->GT1 <---------DEAR3(1) ----YAB1<---------MYB46(3)            --------->KAN4(1)          ---------->DOF2   <------NtERF2 ->YAB1  --------->MYB52(2)           <------ZmHOX2a(2)       --------->At4g35610   --------->ATERF1(1) -YAB1   <-----------RAV1(1)         --------->ARR11(3)      ----------->RAV1(1)    <---------ABI4(1) >ICU4 <---------ANAC46              <---------ARR11(3)    --------->At4g35610------->MYC3 <--------P -------YAB1                        <------ZmHOX2a(1)---------->DOF2--------->DAG2<---------DEAR3(1)   atcagtgttgtttgttgttgtttagggtgaacacaagaggatcattcttatgctgtaaagaagcagcaaaaaggctaaaacgtggaggcggtggtaggat  6018400  Previous    Next  AGI:  At5g18210.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G03980.1); similar to short chain dehydrogenase [Solanum tuberosum] (GB:BAE46415.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 6017867    to: 6019995    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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