Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------DEAR3(1)       <---------YAB1   --------->KAN4(2)  <---------HSFC1(2)  --------->HSFB2a(1)  --------->KAN4(1)                                                       ----------->GT1  --------->HSFC1(2)                                                  --------->ATHB12  <---------HSFB2a(1)                                                <---------YAB1          --------  <---------KAN4(1)                                                  <---------AHL20(2) ----------->HVH21 <---------KAN4(2)     <---------YAB1          --------->ICU4        --------->AHL20(2) <---------ATHB12   gagaatgttcttattcggcgagattatttttctgacaatacatagcacaatgtttagttttcccaaactatataattggaaaattttccaatgacatctc  6005600                          <---------ANAC55(2)                          <---------ANAC46                          <---------ANAC58                          <---------------AGL15                   --------->At5g28300                  ------->GAMYB                  --------->TOE2(3)                ------>MYB46(1)                -------->P----------->GT1           <---------ARR14(2)           --------->ARR14(2)          --------->GLK1(1)--------->LBD16      <---------DDF1<---------MYB52(1)     >>>>>>>>>>bZIP19     --------------->AGL15     >>>>>>>>>>bZIP23     <---------ANAC58     <---------ETT(2)     --------->ANAC55(2)     <<<<<<<<<<bZIP19    <-----------------AGL3                        ------>ZmHOX2a(2)     --------->ETT(2)    ----------------->AGL3                      --------->ARR11(3)     <<<<<<<<<<bZIP23    ----------------->AGL2                      <---------ARR11(3)    --------->DDF1--------->YAB1   <----------ID1           --------->ZAT6                         -- ->At4g35610    ------>MYB83       <------ZmHOX2a(1)       XXXXXXXXXXXXXXXXXXXX>MIR863-5P      ------   aaatatgtcgacatatccaaccgtaattccgtaaataggaacaaaaacatccaaagaatttaagtctagttgatctcaaattttaggcaagttgcaaata  6005700                                                                                           --------->AHL20(2)                                                                                        <---------ARR11(3)                                                                                      --------->ICU4                                                                                    ---------->DOF2                                                                                 <------MYB46(1)                                                                                 <------MYB83                                                                             --------->MYB52(2)                                                                             --------->MYB111(2)                                                                             --------->MYB46(2)                                                                             --------->MYB111(1)                                                            --------->AHL20(2)   ----------->GT1                                                            <---------AHL20(2)<-------GAMYB<---------AHL20(2)                                                     --------->HSFC1(1)      <---------MYB46(3)                                                     <---------HSFC1(1)    <---------MYB52(1)  <-----     --------->YAB1                                  --------->HSFB2a(2)  <-------GAMYB --------->ARR11(3) ------->ANAC46                           <-------TEIL--------->LBD16 ------------>AtMYB77--------->AHL20(2) --->AHL20(2)                        ---------->DOF2 <---------HSFB2a(2)  ------------>MYB.PH3(2)   aacacaagtatattttagttgaattatacaactaaactcaaaagtacatgttgttccagaaattaaacagatagacagttagttggtaaagatttaatta  6005800                                --------->TOE1(3)                                                   <                --------->AHL20(2)                                   >>>>>>>>>RAP2.2               <-                <---------AHL20(2)       <---------YAB1           <---------CCA1(2)                --          ----------->GT1       --------->YAB1                  --------->AHL20(2)               <---          <----------ID1        --------->TOE2(3)         --------->YAB1          ---------->DOF2----        ---------->DOF2--------->HSFB2a(2)     ---------->ID1<---------ICU4   ------>MYB83      <---- ----AHL20(2)  --------->AHL20(2)  ---------->DOF2       <---------YAB1       ------>MYB46(1)   -----   gttgattcaaaaaagaaaaaaatttctcgagttatcttaaagtatgtttgtcttaacttatcaaaattatatctaaaacccacttaaaggcttaaaccat  6005900                                                                                                   <-                                                                                                   <-                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               <-----                                         <---------At4g35610                                   ------                                         --------->At4g35610            <-----------ARR10      <-----        <---------ANAC46                 --------->ZAT2              <---------ATHB12          <-----        <---------ANAC58         <---------ANAC55(2)              <---------ALFIN1             ------        <---------ANAC58         --------->ANAC55(2)           --------->AtMYB61               <----- ---------ICU4                 --------->AHL20(2)       --------->At4g35610                    ------ --------YAB1              <---------AHL20(2)           --------->ZAT2  ------->TEIL           <----- ------->ICU4              --------->AHL20(2)           <---------At4g35610                    <----- ------ICU4                --------->AHL20(1)           <---------ZAT2 <---------GLK1(2)      ------- ----->YAB1               --------->AHL20(2)            ----------->RAV1(2)                 <------ZmHOX2a(2) -----YAB1    <----------DOF2  <-----------GT1   --------->At5g28300--------->ANAC46       <--------- ---->ICU4  ---------->ID1<---------AHL20(2) <---------ALFIN1------->TEIL           --------->YAB1---   gattattgtgtcttgtctttttttgtaattaaattacttaatcagctccaccgtaatcagctggacctccactgaatcttacccaaacatatcgatcacg  6006000 --------ANAC58 --------ANAC58 ---MYC3 ---MYC2 -->MYC3 -->MYC2 ---PIF4 -->PIF4 ---MYC4 ---PIF5 -->PIF5 -->MYC4 ----bZIP60(2) --->TGA1a ----TGA1a ----ANAC58 --->O2--------->AHL20(2) ----O2----------->TBP                   *TSS --->ANAC55(2)           --------->ANAC46--------->YAB1                          <---------At5g28300 ----ANAC55(2)           --------->ANAC55(1)  ----------->HVH21<----------DOF2  <-----------GT1 ----ANAC58         <-------TEIL    ------------>CBF         ------>ZmHOX2a(1) <---------YAB1 ----->OsbHLH66 <-------TEIL    --------->ANAC58       <---------ATHB12     --------->AHL20(2) --HVH21   --------->AHL20(2)   ----------->GT1       ------>MYB83  --------->ZAT6 ---->TEIL <---------AHL20(2)   --------->ANAC58      ------>MYB46(1)------->GAMYB        <---------YAB1   tgcctgtgtataaataaatacatacacacttaacaagttacaatcagactgacaccaatcttcctctttaacagtcgttttattacagcgttctgatcaa  6006100                                                                                           --------->MYB52(1)                                                                                          ------->GAMYB                                                                                         --------->MYB46(3)                                                                                         <---------MYB52(2)                   <-------TEIL                                                     --------->ANAC46                   --------->ZAT14                                     <---------YAB1--------->At4g35610              ---------->DOF2                  >>>>>>>>>TBF1      --------->ANAC58--------->At4g35610       ---------->DOF2        ------------------------>ANAC81     --------->ANAC58<---------At4g35610 --------->ZAT14   --------->ZAT18          >>>>>>>>>TBF1     >>>>>>>>>TBF1   <----------DOF2   <---- <---------ZAT14   <---------ZAT14   ---------->DOF2       >>>>>>>>>TBF1  ------->TEIL ----------->RAV1(1)   aactccagtgaaagttcaaagtacacagagagaaacaaaaaaagaagaagaagaagttgaagaagaagaagccatgaatgctttagcagcaacaaacaga  6006200                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                <-------TEIL        -         <---------At4g35610                  ---------->DOF2               <---------TOE2(3)    <---         <---------ZAT2                   --------->HSFB2a(2)          --------->GLK1(1)   <---------         --------->At4g35610              <---------HSFB2a(2)      <---------HSFB2a(2)   <-----------GT1        --------->MYB52(2)     <---------GLK1(2)                   --------->HSFB2a(2)--------->ARR14(2) -----GLK1(2)                  --------->ARR14(2)                  --------->LBD16    <---------ARR14(2)   aacttcaagttagctgctaggcttcttggtctggattctaagctcgagaaaagtcttctcatccccttccgagaaatcaaggttcgcaaattttcactcc  6006300                                                  <------NtERF2                                                 --------->LBD16                                                <---------ANAC46                                                --------->DEAR3(1)                                               --------->ATERF1(1)                                               <------NtERF2                                              <---------RAP2.3(1)                                              <---------RRTF1(1)                                              <---------ERF1                                              <---------RAP2.6(1)                                              ------>NtERF2                                              <---------ATERF1(1)                                             --------->DEAR3(1)                                             <---------DEAR3(1)                                            --------->ATERF1(1)                                            <---------ABI4(2)                                            <------NtERF2                                            --------->RAP2.6(1)                                            --------->ERF1                                            --------->RRTF1(1)                                            --------->DEAR4(2)                                            --------->RAP2.3(1)                                           <---------DEAR3(2)                                           --------->LBD16                                           <---------ORA47(2)                                           <---------RRTF1(1)                                           <---------RAP2.3(1)                                           <---------ATERF1(1)                                           ------>NtERF2<---------ARR14(2)                                           <---------RAP2.6(1)                                           <---------DEAR4(2)                        <---------ICU4                                           <---------ERF1 <-------TEIL               --------->ATHB12                               <---------ANAC58<---------LBD16                       -------->HAHB4                   <---------ARR14(2)     --------->DEAR3(1)                        --------->ICU4               --------->TOE2(3)          <---------RAP2.3(3)            <---------ZAT14               --------->TOE1(3)          <---------DEAR3(1)          <---------ANAC46        ------>MYB46(1)--------->LBD16    <---------ATERF1(2)       <---------MYB46(3) <---------YAB1        ------>MYB83   --------->At4g35610--------->ATERF1(2)   <------NtERF2----------->GT1      <---------MYB59------>ZmHOX2a(2)   --------->ATERF1(1)<-----------HVH21<---------ZAT6 -------->TOE2(3)  --------->ARR14(2)    <---------LBD16--------->ARR14(2) ----------->GT1 -------DOF2<-----------GT1    <---------ANAC58--------->RAP2.3(1)--------->At5g28300--------->YAB1 --GT1--------->TOE2(3)<---------At4g35610<---------RAP2.3(2)   <---------DEAR3(1)  <---------YAB1   tttcttaacctaattaaccttgatccgctgattttgtgccttcgccggcgccggagacgattcgtcgcggtggattgtagtgaaaaatgattactgaatg  6006400                                                                <---------AHL20(2)                                                         --------->At4g35610                                                         <---------At4g35610                       <-                                    <------ZmHOX2a(2)   <---------MYB46(3)   --------->MYB46(3)    --                         <---------DAG2                <--------P            <---------MYB52(2)<-----                         <----------DOF2           <---------LBD16       --------->LBD16      -------                   <---------ARR14(2)    <---------MYB52(1)     --------->AHL20(2)     --------->AHL20(2)                   --------->ARR14(2)------>ZmHOX2a(2)<---------MYB52(1)--------->ANAC46      -------                 --------->ANAC46  --------->ARR14(2) <-------GAMYB    <---------LBD16 <---------AHL20(2)                 ----------->HVH21 <---------ARR14(2)--------->LBD16 <-----------GT1  --------->AHL20(2)   tttaggggcatttcgaaacccgacccgcttttttgtggatccagttacttcaatccggttgctgaattatataaccggaacaaaccaatttaaatcaacc  6006500  Previous    Next  AGI:  At5g18170.1    Description:  GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase. Identical to Glutamate dehydrogenase 1 (GDH1) [Arabidopsis Thaliana] (GB:Q43314); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07440.1); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2) [Arabidopsis thaliana] (TAIR:AT5G07440.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23481.1); similar to GDH1 [Actinidia chinensis] (GB:ABR45723.1); similar to glutamate dehydrogenase 1 [Glycine max] (GB:CAI53673.1); contains InterPro domain Glu/Leu/Phe/Val dehydr Range:  from: 6006041    to: 6008474    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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