Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  ----------->GT1               <---------TOE1(3)                                     ----------->GT1               <---------TOE2(3)                                   ---------->DOF2           <----------DOF2                                       --------->YAB1     <------ZmHOX2a(1)          <---------ANAC58                                     ------->TEIL        --------->LBD16          <---------ANAC46            <----------DOF2       <---------ATHB12     <-----------RAV1(2)    --------->ARR11(3)             <---------YAB1         --------->WOX13(1)     <---------LBD16 ---->DOF2<---------ANAC58  <----------DOF2             <---------ATHB12<-----------GT1        <-----   agagaagaaattgcttgaaggttacaaactctttgttattctttttccaagattacaaatcaatgaatcaaaagttacaaaattcaggagaaagattaga  5999900                               --------->ATHB51                              <---------YAB1                            <---------ICU4         --------->ZAT14                            -------                            <--------HAHB4         --------->ZAT18                            <------                           --------->ICU4          <---------ZAT18                         <---------ANAC46                           <---------YAB1          <---------ZAT14                         <---------ANAC58                         <--------HAHB4       <---------DAG2                               <---------ANAC58                        <---------YAB1        <----------DOF2                          <----------DOF2                   --------->DAG2        <-----------GT1                            <---------ARR11(3)  <---------ATHB12---------->DOF2      <---------ANAC58                             --------->ARR11(3) -----ID1 --------->ZAT14--------->YAB1<---------ANAC58---------->DOF2     ---------->DOF2---------->ID1   acaaatgaatactaaactcgtaaagtatcattattattgtttcttacactttctgcacaaagaagaaaccaaaaaaaaaaagatgaaatcttttcgtatt  6000000                                                                        <---------ARR14(2)                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                  ---------->DOF2       --------->ARR14(2)                                               ------>ZmHOX2a(1)  --------->ANAC58    --------->YAB1   <---------GLK1(1)     --------->GLK1(2)      --------->ANAC58   --------->ANAC46    <---------ICU4   --------->GLK1(1)     <---------ARR14(2)   <---------MYB52(1) --------->ANAC58 --------->YAB1   <---------TOE2(3)        --------->ARR14(2)  <---------At4g35610 --------->ANAC46 -->ARR14(2) --------->ATHB12       <---------ANAC58    <---------ARR14(2)         --------->ANAC58 ---ARR14(2)<---------YAB1          <---------ANAC58    --------->ARR14(2)       <---------ALFIN1   cgttcatcatcatcttcattgagatttctctctcatttccttgagattcctccaaaggtatcttccgctagccatatcgacgaacacccaaaacccattc  6000100                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                      --------->DAG2        <--------                                                                     ---------->DOF2       ----------                                                                 <----------ID1        <---------ANAC58           <---------YAB1                                       <-----------------AGL1 <---------ANAC58          --------->AHL20(2)   ------------------------>ANAC81  <---------TOE2(3)     ---------------      ----------->GT1     ---------->DOF2   <----------ID1     --------->MYB52(1)    <---------YAB1<-   tccatcttctgttaaaatagcaattcaacaaagaaacagagaaattagaacaaatcaccagaaattaacgaaaaaggaacgagatttatgcttacctttt  6000200                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                    <---------ANAC46 --DAG2                         ----------->GT1       --------->ARR11(3)          --------->LBD16 ---DOF2                        --------->LBD16------>NtERF2                  <---------ARR14(2) ------>AGL15                   --------->At4g35610   <---------ARR11(3)      --------->ARR11(3) -------AGL15                  <---------MYB46(3)     <-----------ARR10      --------->CCA1(1) -DAG2 --------->ARR11(3)     --------->SPL7   --------->LBD16               --------->RVE1(1) ------->AG                   <---------LBD16 <---------LBD16         --------->AtLEC2   <---------ZAT14 >AtSPL8                    <---------SPL7<---------GLK1(1)<---------At5g28300--------->ARR14(2) --------TOE2(3)            <-----------HVH21<---------LBD16 --------->DEAR3(1) <---------LBD16   tgagattgagttcttgtttctcattcaattcgtccggtgaatcgaattccggcgaagaactcaccgtcttccatgcgaaatatccggcgagtacagctga  6000300                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                 <---------ANAC46               -----                      ----------->HVH21                       ----------->HVH21                <-----                     --------->TOE1(1)                        ----------->TGA1                 ------                    <---------At4g35610               ------------>CBF                       -------- >ZAT2              --------->At4g35610              ------>ZmHOX2a(2)                      <-------- >At4g35610     --------->TOE2(3)                  --------->ARR11(3)               <---------TOE2(3) -At4g35610   ------->TEIL              <------------CBF    --------->ALFIN1        <---------TOE1(3) -ZAT2    --------->YAB1         <---------AHL20(2)<---------ARR11(3)    --------->YAB1 <-------TEIL-   gaagaacaccaataagaacctcatcggacacatatttttttgaattggaatatgatctcaatgtgtgacgaagaatgagaagttttagggttcgtaagat  6000400 ------->HSFB2a(2)                               --------->DAG2 --------HSFB2a(2)                              ---------->DOF2 -------LBD16                                  <---------YAB1                                      -- ---->GLK1(2)                                --------->YAB1                         --------->ANAC46 ----GLK1(2)                                 --------->AHL20(2)           ---------->ARF1         --- --->ARR11(3)   <---------ANAC46            --------->ICU4            <---------ANAC55(2)    -------- --->ARR10      <---------ANAC58  --------->CCA1(2)                   --------->ANAC55(2)    <------- -TOE1(2)   <------------CBF     --------->ARR11(3)             <---------TOE2(3)   --------->ANAC58 -------->LBD16 <---------ANAC58 <---------ARR11(3)         <------------CBF        --------->ANAC58   tctgggaaacgaagaattgtgtgagagaagagagagatatagagaaattataaagggggtgagattgagattacatgtctcccctctcgccactacgaga  6000500                                                                    --------->WOX13(1)                                                                  ------------>CBF           <---------ARR14(2)                                    --------->TOE2(3)           --------->ARR14(2)   ----------->GT1                 --------->ANAC58   --------->ARR14(2)          <---------TOE2(3)   --------->MYB55(2)    <---------ANAC55(2)   ------   <---------ARR14(2)         --------->YAB1   <---------AtMYB61--------->ANAC58               <----- ------->DAG2                <---------ATHB12<------------CBF   --------->ANAC46   ----------->RAV1(1) ------->DOF2            ------------>CBF<---------TOE2(3)     <-------TEIL ---------->DOF2   ------- ->HSFB2a(2)     ------->TEIL--------->ICU4<------ZmHOX2a(1)--------->CCA1(2)      <---------ALFIN1<- --HSFB2a(2)    <---------CCA1(2)<------ZmHOX2a(1) <---------MYB46(3)  --------->AHL20(2)     -------   aaaaggaaacgcgtttctgaatctttcagcaatgaggaaaatttaggaattggtggtttgatatatacgtcaattacataaagacccacagtgttttcca  6000600    <---------AHL20(2)    --------->AHL20(2) --------->YAB1 --------->AGL15 ----------AGL15         <---------TOE2(3)                              <---------ICU4 ---------->AG      <----------DOF2                            --------->YAB1    --------->HSFB2a(2) ----------TBP<---------ALFIN1                        <---------TOE2(3)------>ZmHOX2a(1)      ------- ---------->AGL3<---------CCA1(2)                <----------DOF2<---------AHL20(2)         --------->ICU4   tatttataaattagccccatttcttttaatgtttttttttttgtcaattttcttttaatgttttataaaaatcctaatttctacgagaatgtcatgagtt  6000700                                                             ---------->DOF2                                                          --------->YAB1                                                         <---------YAB1                                                       -------->HAHB4                                                       <---------ICU4                                                       --------->ATHB12                                                       --------->YAB1                                                      <---------YAB1                                                      <---------ATHB12                                                      --------->ICU4               --------->DAG2                                                     <---------TOE2(3)            ---------->DOF2                                                   --------->AHL20(2)             ===================                                                   <---------AHL20(2)          <----------ID1                                                  --------->AHL20(2)     <---------YAB1                                                  <---------AHL20(2)   --------------->AGL15                                               --------->AHL20(1)      <---------------AGL15                    ----------->GT1            --------->AHL20(2)     ----------------->AGL3            --------->YAB1                     <---------AHL20(2)     --------->ICU4             ----        <-----------GT1                       <---------AHL20(2)      <-----------------AGL3    <---- -->At4g35610    --------->ICU4               --------->AHL20(2)      <---------YAB1----------->GT1   gaaagaattttcacccataatgttgaaaatttgaagcgaatttttgaattaaattaatgattataaagagtcactattaatgggaaaagtagaatttaga  6000800  Previous    Next  AGI:  At5g18140.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT2G22360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23479.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 5998177    to: 5999890    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g18150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G14602.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23480.1); contains domain PTHR12133 (PTHR12133) Range:  from: 6000016    to: 6000333    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version