Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->At5g28300                                                                      ----------->GT1                                                                    <---------ZAT14                                                                    --------->ZAT14                                                                <---------ICU4                                                                <---------------AtSPL8      --------->ANAC58                            ------>ZmHOX2a(1) <-------TEIL      --------->ANAC58                 --------->bZIP60(1)     --------->ICU4              ------>ZmHOX2a(2) ------>RAV1(1)                        <---------bZIP60(1)   --------->YAB1        <---------ZAT14 ->ANAC58                    ----------->GT1     --------->TOE2(3)  --------->ZAT18--------->ZAT14 -- ->ANAC58               <------ZmHOX2a(1) <-----------GT1   <---------ZAT6    ---------->DOF2    ----   acaaaatcaagaaatatggaacatcaggaaatggtaaaatgaagtcacattcctcaatttcagtgataagtacagtaaataaaagtttactgatcgatgt  5961200                                                                                  <---------ZAT18                                                                                 <------ZmHOX2a(1)                                                                                --------->ANAC46                                                                       ------>ZmHOX2a(2)                                                                       =================HOX2a_HOX2a                                    --------->ANAC46                  ==================HOX2a_HOX2a                           <---------ICU4                             --------->CCA1(2)                          <------ZmHOX2a(2)                           <------ZmHOX2a(2)                      ------>ZmHOX2a(2)                              --------->AGP1                     <------ZmHOX2a(2)                               <---------AGP1                    --------->ARR14(2)                               --------->ARR14(2)           <---------MYB52(1)     --------->ANAC46                   --------->ARR11(3)  --------->YAB1    <---------ARR14(2)                               <-----------ARR10 --------->GT1<------MYB83<---------ATHB12                           <---------ARR11(3) ----->ZAT14  <------MYB46(1)   <-----------GT1                      <---------ARR14(2)   --------->ANAC46   acagtcaaaatccatttggtccgatccgatcatttcacacatcaaaacttagttaagaccaagaacagacagatctaagttcaggacactacaagagaca  5961300                            --------->AHL20(2)                        <---------AHL20(2)                        --------->AHL20(2)                      <----------DOF2                                    <--------HAHB4                     ------>ZmHOX2a(2)                                   <---------ICU4                   <---------ARR11(3)                            <---------ANAC58         ------>ZmHOX2a(2)                   --------->ARR11(3)  ----------->GT1 --------->ANAC55(2)              <---------ARR11(3)               --------->ARR14(1)     --------->DAG2   <---------ANAC55(2)              --------->ARR11(3)              --------->ARR11(1)    ---------->DOF2   <-----------------------TaNAC69(2)<-----------ARR10              <---------GLK1(2)<---------TOE2(3) --------->AHL20(2)     <---------YAB1 --------->YAB1 --------->ZAT14<-------TEIL<---------AHL20(2)--------->YAB1     <---------ANAC58    <---------KAN4(2)   cactgaagaaccaatagattcgatctttaatttaagaaaaaaggctaataagaaaataagtgataaggcttaccatcatttcagtcgaatgatcttccct  5961400                                         --------->At4g35610                                    --------->HSFB2a(2)           <-----------GT1                 <--                                    --------->YAB1  ---------->DOF2                              ----                                    --------->TOE2(3)           <-----------GT1                ------    --------->GLK1(2)        <----------DOF2  ----------------->AGL2                  ------>ZmHOX2a(1)    --------->ARR11(3)  <---------ARR11(3)    ----------------->AGL3                  ===============   <---------GLK1(2) <---------GLK1(2)  --------->GLK1(2)<----------DOF2    <---------At4g35610<-----   tcgaagaatcttgaagaatgctggattatctctttcttccataatctgaccaaaaaaagctttgtttttcaccatctctgcttctctccttcgatatgat  5961500                                                                  <-----------ARR10 --------DOF2                                                    <---------CCA1(2) -->ZmHOX2a(2)                       <---------ZAT14           --------->ANAC58 --->ARR11(3)                     ------>ZmHOX2a(1)            --------->ANAC58   <---------DAG2    - ===HOX2a_HOX2a           <----------DOF2         ------>ZmHOX2a(1)               <----------DOF2   - ----ARR11(3)        <-----------GT1 --------->ZAT14 <-----------HVH21    <----------DOF2           -   ctttcttcaaaacctctcagtcttaactctttaatcctcttcactctatctcctcagtcactcactcgcatcttctcttttcaacttttctatctcactc  5961600                                                                            <---------------AGL15                                                                            --------->HSFB2a(2)                                                                            <---------HSFB2a(2)           <----------DOF2                  *TSS                            --------------->AGL15     --------->REM1(1)                    ----------->GT1            <---------AHL20(2) -------->ANAC58                         ----------->GT1             --------->AHL20(2) -------->ANAC58             <---------ANAC46                      <----------DOF2             <----- -------->ANAC46           <---------MYB46(3)  ---------->DOF2     --------->TOE2(3)   ---------->DOF2   actcgctacttctctttctctctctctggttgtgggcaaagaatgggtaaaaagagaggtctcttaaaactttaatttctaaaaacagccaaagtgtttt  5961700                                      --------->MYB55(2)                                      --------->MYB111(1)                                      --------->MYB111(2)                                      --------->MYB52(2)                                      <---------MYB46(3)                                    <--------P                                    <---------MYB52(1)                                   <-------GAMYB              --------->TOE2(3)                                  <---------MYB46(3)         --------->YAB1                             <---------ANAC58                -------->ATHB1                           <-----------GT1                   <--------HAHB4                     --------->AHL20(2)                      <---------ICU4                     <---------AHL20(1)                      --------->ATHB12  <---------ANAC55(2)  -                     --------->AHL20(1)          --------->ARR14(2)            --------->ANAC55(2)---                     <---------AHL20(2)<-------GAMYB       ------->TEIL        --------->YAB1     ---       <----------DOF2<---------AHL20(2)         <---------GLK1(2)   <----------DOF2             ---- <-----------GT1    --------->AHL20(2)--------->MYB46(2)<---------ATHB12  <---------YAB1    --------- ----AHL20(2)<----------DOF2 <---------ANAC58---------->DOF2<---------ATHB12   ----------->GT1   <---   atttttctgcattaactttgaaattaattttacttgtggttagttggaaaagattcccatgaatcattaaacttttgtgattcgtaatttgatatcgtaa  5961800                                      --------->ANAC58                                      --------->ANAC58                                      --------->ANAC55(1)                                      --------->ANAC55(2)   --------------->AGL15    --------->ANAC46                  --------->ANAC46      <---------------AGL15 -------->CCA1(2)                     <---------ANAC55(2)   ------>ZmHOX2a(1) ----->HAHB4                          ----------->GT1      <-----------------AGL3 ------>YAB1                         <-----------------------TaNAC69(2)     --------->GLK1(1) ----->ICU4                      --------->ANAC46          <-----------------AGL2           <-------- >YAB1                     <---------ANAC58 --------->DAG2 ----------------->AGL2           <-------- ------YAB1                <---------ANAC58---------->DOF2 ----------------->AGL3  ---------->DOF2 <-   tgatacacagaaacagcaatatgctcgtgacttcccagacacgtaaaaagcagagcaaattcctatttttagtaactgaattctaaaaagacagcgtcat  5961900                                               <---------ZAT18    --------->At5g28300                                               --------->ZAT18  --------->ANAC58                                               --------->ZAT14  --------->ANAC46                  <-------GAMYB --------->AHL20(2)              --------->ANAC58                  <---------ANAC58             <---------ZAT14 <---------At5g28300 ---HVH21         <---------ANAC58           --------------->AtSPL8        ----------->GT1 ---TGA1<---------AHL20(2)      <---------AHL20(2)             <---------LBD16    <-----------GT1 ----------GT1   <---------MYB46(3) --------->AHL20(2)   <-------TEIL     <---------TOE2(3)      ----   atttccatatttttttttttggttgcataaactattaattaacttatactgtactaaaatacattcacggcaaattttggttaatcacccatttgaaaac  5962000                                                                              --------->REM1(1)                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC58                 <---------STY1(2)                               <---------DAG2            <-----------GT1                                      <----------DOF2                    -         <---------ICU4                                       <---------AHL20(2)                    <     ------>ZmHOX2a(1)                                        <-----------GT1<-------TEIL     <------ ----->TOE2(3)   --------->STY1(2)             <---------At4g35610   <-----------GT1          -------   ctcattcctaatatttactagctagtctgtagaatgtagacttgtgtccagcacatacccctattaactttatacaagctacatgtttgaaaacttagct  5962100  Previous    Next  AGI:  At5g18000.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G18090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 5959902    to: 5961644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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