Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->YAB1                     <---------ICU4                     <--------HAHB4                    <---------YAB1                    --------->ICU4            ------>NtERF2            <---------ATERF1(1)         ------>NtERF2                                                                        ------- -------AHL20(2)  --------->YAB1                                                           <--------- ---->GT1--------->LBD16                                               ------->TEIL   <---------MYB46(3) --MYB52(1)--------->DEAR3(1)          --------->ANAC55(2)          ----------->GT1   ----------->GT1 >LBD16<---------LBD16          ------>ZmHOX2a(2)             <---------ANAC46        <---------ANAC46   taaatttcttccggcgactaccatcattatctgatcggctcatgtaatattgtttttttttttggaggggatgtatatatagtttgggtcgtttaacctt  5956800                                                      --------->YAB1                                                     <---------YAB1                                                   <---------------AGL15                                                   ------>ZmHOX2a(1)                                                  --------------->AGL15                                                  <-----------------AGL3                --------->ICU4                    <---------------AGL15                          <---                <---------YAB1                   ----------------->AGL3                          <---    <----------DOF2                           <---------GLK1(1)                                 -----   ----------------->AGL1                     --------->GLK1(1)       <---------WRKY18(1)       ----- -->TOE2(3)----------->GT1                 <---------YAB1             <-----------GT1       --------- --GT1--------->ATHB12               --------->AHL20(2)        <---------ANAC46      ---------->DOF2   gttgggccttattgggttataatgggccactaaatggatttttatatgatttcctattataggtgctgtgtttgaccatgtctaaaacaaagaagtgttt  5956900                                               ----------->GT1          <---------MYB46(3)                             --------->At4g35610          --------->ANAC58  <------MYB83                      <---------DAG2           --------->LBD16    --------->GLK1(1)                      <----------DOF2        <---------LBD16  --------->ANAC58         ---------->DOF2 ---MYB83           ------>MYB83            --------->ALFIN1  --------->ANAC58   <---------MYB52(2) ---MYB46(1)        ------>MYB46(1)      <---------------AtSPL3   <---------GLK1(1)--------->MYB52(1) ---->MYB59       <---------MYB59   ----------->GT1       --------->ANAC46  <---------MYB46(3) ---->MYB46(2)    <---------MYB111(1)--------->At5g28300  --------->ANAC58  <------MYB46(1) >ALFIN1        ------->TEIL <---------At4g35610         --------->ZAT18<-----------RAV1(1)         -   ggtatgacaaaattgatgaacctactttttgagcagagtggtaaatgtgcggaaataagcacacaaggaaatcgttgttggtgactaacaaaaggagtta  5957000                                   <---------------AGL15                                   --------------->AGL15                                  <-----------------AGL3                                  <-----------------AGL1                                  ----------------->AGL2                                ------>MYB83                              ------->GAMYB                              --------->AtMYB61                             --------->MYB46(3)                            ------>MYB46(1)                            -------->P                            ------>MYB83                           --------->MYB55(1)                          --------->DEAR3(1)                          <---------MYB55(2)                          <---------MYB111(2)                          --------->AtMYB61                       --------->AtMYB61                      --------->MYB46(3)                     -------->P ------>MYB46(1)                    ------->GAMYB <-----------------AGL2                   <---------MYB111(1)                   <---------MYB52(2)                   <---------MYB55(2)                   <---------MYB46(2)                   <---------MYB111(2)                  ------>MYB46(1) <-----------------AG                                              <                  ------>MYB83<---------MYB59                                                       <          <---------ICU4  <---------MYB46(2)                                                        <          --------->YAB1  --------->MYB46(3)                     <---------WRKY38(1)                -         <---------ATHB12 <---------MYB111(1)                    <---------WRKY45                   -        --------->ANAC58 --------->MYB46(3)                 <---------MYB52(1)                     --        --------->ANAC58--------->ANAC46                 <-------TEIL  ----------->RAV1(1)     ------ -------->At4g35610--------->MYB46(3)              ---------->DOF2---------->DOF2 --------->WOX13(1)-   tccactgcccaagcattaccaactaccaccaaccaaactcaatttggaaatttcaaaggtccattagtcaaagcagcattaagtcattcagtaatcaaca  5957100                                      <----------DOF2    <-------TEIL                      <---------DAG2 ---------AHL20(2)               <-----------GT1                                             -------- ---------ARR11(3)             --------->AHL20(2)                                       --------->ANAC46 ---------AHL20(1)         --------->AHL20(2)                                     <----------DOF2 -------->AHL20(2)         --------->AHL20(1)                        --------->ZAT14    --------->ANAC58 -------->AHL20(1)         <---------AHL20(2)         --------->AHL20(1)         <---------------AGL15 ------->AHL20(2)     --------->AHL20(1)              --------->AHL20(2)     --------->GLK1(1) --->MYB46(3)         --------->AHL20(2)              <---------AHL20(2)     <---------GLK1(1)     -- -------->ARR11(3)    <---------AHL20(2)         --------->AHL20(2)  <---------ZAT14    --------->ANAC58   aatatattcatatgaaacccaaaataaaataaaataaacacttttcaagaaaaaaataaaatactgagtactaaactggaaaccctttataagcaaaaag  5957200                           <----------DOF2                      --------->CCA1(2)                      --------->ARR14(1)                             --------->YAB1                     <---------ARR14(2)                             <---------YAB1                     --------->ARR11(1)                           --------->YAB1               *TSS  --------->ARR11(3)                          --------->MYB46(3)             <---------AHL20(2)                                 ------->TEIL          ----------->GT1<------MYB83                        --------->MYB46(3)   ----------->GT1 ----------->ARR10          <---------YAB1 --------->ANAC58 ---------->DOF2   <---------TOE2(3)      <---------DAG2     <---------MYB52(2)      <---------TOE1(2) -->DOF2---------->DOF2  <------MYB46(1)  <----------DOF2    --------->ANAC58       ------>ZmHOX2a(1) ------->AtMYB61   <---------YAB1    <----------DOF2  <------ZmHOX2a(1)    <---------GLK1(1)     <---   accaaaagttaaaagttaattaagatttggtttaaggcgctttgctttattagagaggaaggaacgaaccatcatagaaatctctccttcgttcaagttt  5957300                                                     --------->At4g35610                                               --------->DEAR3(1)                                              <------NtERF2                                             ------>NtERF2                                             <---------ATERF1(1)                                          ------>NtERF2                                          <---------ATERF1(1)                                         <---------DEAR3(1)            <-------GAMYB                --------->ALFIN1            <---------ANAC58            --------->ATERF1(1)           --------->MYB52(2)         <---------ANAC58                                 ------>ZmHOX2a(2)           --------->MYB55(2)         <---------ANAC58                        <-----------HVH21           <---------MYB46(3)         <---------ANAC46                       <----------DOF2       <-           <------MYB46(1)           <---------LBD16 --------->ZAT2--------->LBD16    <------ZmHOX2a(2)           <------MYB83         <---------YAB1--------->ATERF1(1) <---------HSFB2a(2)<---------ARR11(3)          <---------AtMYB61    <-------GAMYB<---------ANAC46      --------->HSFB2a(2)--------->ARR11(3)       <-----------RAV1(1)    <---------MYB46(3)------>NtERF2     --------->ANAC46   <---------ARR14(2)       --------->ALFIN1   ----------->HVH21--------->ATERF1(1)    --------->ANAC55(2)--------->ARR14(2) --------GT1<---------ANAC58 <---------YAB1<------NtERF2         <---------LBD16 <---------LBD16   <-   ttctctactgtgttggttgagcaatcgagtgatggttattgcggtggcgacgacgagctccattgtttccggaatcaagctttcagggatcttaacttcg  5957400                                                                                       <---------YAB1                                                                                   <---------GLK1(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                               ------>NtERF2                              --------->LBD16                                 <---------DEAR3(1)                             <---------ANAC55(2)                              --------->DEAR3(1)                             <---------ANAC58                                 ----------->HVH21                             <---------ANAC46                                --------->ATERF1(1)                <---------ANAC58    --------->ANAC46                         --------->RAP2.3(1)      --------->LBD16        <---------ANAC58                                <------NtERF2     --------->DEAR3(1)      <---------HSFB2a(2)                            <---------ATERF1(1)     <---------ANAC46        --------->HSFB2a(2)--------->LBD16             <---------ORA47(2)   ------->GAMYB<---------ANAC58    --------->ANAC58                        <---------RAP2.3(1)    --  --------->DEAR3(1)        <---------LBD16   <---------LBD16              <---------DEAR3(1)      --  --------->ANAC46      <---------MYB46(3)  <---------WRKY18(1)           --------->ATERF1(1)      <- --------WRKY12 <---------ANAC46    --------->ANAC58            --------->ANAC46 ----------->ARR10 <- --------WRKY38(1)    <---------MYB52(1)   ----------->HVH21    <---------ETT(1)<------NtERF2  ------   ttcaacgccgtagatgatgcgtccagtagttgcggaagaagcaacttgaccggagttagaatttttccgacattgagtcggcgacgattctcatcgatcg  5957500                                                ---------->DOF2                   <---------YAB1               <---------LBD16               --------->ANAC58                  <---------------AGL15        --------->LBD16                      --------->ANAC58                  --------------->AGL15 ------->At4g35610                          <---------TOE1(2)                --------->At4g35610 ------->ZAT2 <---------ANAC46              <---------TOE2(2)         <---------ANAC58 --------At4g35610                         <-----------RAV1(2)        <---------ANAC58----------->GT1 --------ZAT2 <---------ANAC58      <---------MYB52(1)               <---------AtMYB61<---------ZAT6 >ZmHOX2a(2)  <---------ANAC58     <----------DOF2        <----------DOF2    <---------At4g35610   gagctgtttccccaattcgtggggatgctcaatcttcctttagtcgcaggtaaagcctcgatttttgggtttaggtgtctgcttattagagtaaaaacac  5957600                                                                            <-----------ARR10                                                                            --------->GLK1(2)                                                                <---------ANAC58                         >>>>>>>>>ARR2                          <---------ANAC58         <---------DEAR3(1)           <---------ANAC58                            --------->At4g35610  --------->ARR14(2)           <---------ANAC58   <---------ZAT18          <---------At4g35610  <---------ARR14(2)          <XXXXXXXXXXXXXXXXXXXXMIR827               <---------At4g35610 --------->YAB1  <---------At4g35610 ------>ZmHOX2a(1)     <---------YAB1  ------>ZmHOX2a(2)   <----------DOF2 <---------GLK1(2)   <-----   atcctttgaaattgtttgtggtcatttgattgtgctcttgatccattgaattgctgcagctctttcgcttgctctcagaatctcggtttgagcggtggat  5957700  Previous    Next  AGI:  At5g17980.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48060.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G03680.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G74720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39865.1); similar to hypothetical protein OsJ_022285 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38802.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62509.1); contains InterPro domain Phosphoribosyltransferase C-terminal, plant (InterPro:IPR013583); contains InterPro domain C2 calcium-depen Range:  from: 5953598    to: 5956747    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g17990.1    Description:  TRP1 (TRYPTOPHAN BIOSYNTHESIS 1); anthranilate phosphoribosyltransferase. Identical to Anthranilate phosphoribosyltransferase, chloroplast precursor (PAT1) [Arabidopsis Thaliana] (GB:Q02166;GB:Q42557); similar to unnamed protein product [Vitis vinifera] (GB:CAO64302.1); contains InterPro domain Glycosyl transferase, family 3; (InterPro:IPR000312); contains InterPro domain Anthranilate phosphoribosyl transferase; (InterPro:IPR005940) Range:  from: 5957215    to: 5959907    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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