Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ----------->GT1                          --------->ANAC58                          --------->ANAC58    <---------ICU4                              --------->ANAC58                          <----------ID1     <---------ATHB51                             --------->ANAC58        --------->MYB59  ------------------------>ANAC81                                  --------->ANAC46 ------------AGL15      --------->MYB52(1)   --------->ICU4                             --------->ZAT6 ----------->AGL15  ------------------------>ANAC81                                <---------ICU4 --ANAC58          ---------->DOF2    ---------->DOF2                            <---------ARR11(3) --ANAC58<---------ANAC55(2)      <----------ID1                                 --------->ARR11(3) --ANAC46--------->ANAC55(2)    ---------->DOF2     <----------DOF2             --------->GLK1(1)   taaatcaagttaagtatccaaaaaagaaacgaaaaaaagaaaaagaaattatggctttaactcgaaatatgttcaaaaactgaaatctttacactcaata  5953200                                                          --------->ANAC46                                                          --------->ANAC58                     <----------DOF2                      --------->ANAC58          --------->ZAT18                                 --------->AtLEC2     <---------AHL20(2)       --------->ATHB12          <---------AtLEC2       --------->YAB1     --------->AHL20(2)  <---------YAB1                <-------TEIL         --------->WOX13(1)     --    --------->AHL20(2)   <---------TOE2(3)      <---------YAB1 --------->MYB46(3)               -----   caaaaattaaaatgcacaaaattctttaacattgattcgatagcacagttttgaatgtgcatgcaacaacttaggcatctatcatatttttctctcattc  5953300                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                         --------->YAB1                                                                                 <-------TEIL   <----    --------->ARR11(3)                                                          --------->CCA1(2)    --------->ARR14(2)                                                         --------->ARR14(2)    <---------ARR11(3)                                                         <---------ARR14(2)    <---------ARR14(2)         <-----------GT1                                --------->At4g35610 -------->DOF2              <---------ICU4          --------->YAB1  <----------DOF2 --------->ANAC46 ---->TOE2(3)     <-----------GT1       <-----------GT1---------->DOF2   ------>ZmHOX2a(1)<---------AHL20(1)   ttaaagtatcttcagtgaatatacagttcatatttactatttttacatgtataaacataaaacacaggctctttcctatcagatacacctaaaataattt  5953400      <---------DAG2                         --------->ANAC46      <----------DOF2                        --------->ANAC58   ------>ZmHOX2a(1)                     --------->YAB1 -AHL20(2)                   <-----------GT1 --------->ANAC58  <---------ATHB12 >AHL20(1)              <---------DAG2  <---------AHL20(2)    <-----------ARR10    <-----------GT1 >AHL20(2)<---------YAB1<----------DOF2--------->AHL20(2)--------->AtLEC2      <----------DOF2 -------GT1     <----------DOF2--------->TOE2(3)         ------>ZmHOX2a(1) <----------DOF2        <--   acctcctactttttgattctttcacactttttttcttaacatataataagccactaatcctgcaaatcaaacctcttctttctttatacactctctctct  5953500               --------->ANAC58                                                   --------->YAB1               --------->ANAC58                                       ----------->RAV1(1)          <-----------GT1                                     <------------CBF --------->YAB1      <----------DOF2                   --------->TOE2(3)<---------AtLEC2    --------->AHL20(2) --------DOF2---------->DOF2         <---------ALFIN1------>ZmHOX2a(1)--------->MYB52(1)   ctttctctcttttcacaaagccatcttgaggcaaactcatcacctcagttaaatcctatgcatgcattgaaacaacagttttaataagaaaaacaaaatg  5953600         <---------ARR14(2)                                                    ------->TEIL         --------->ARR14(2)                                                    --------->SPL7       --------->LBD16                        --------->REM1(1)                <-------TEIL      --------->ANAC46                    ------>ZmHOX2a(2)                   <---------SPL1(1)      --------->LBD16                    <------ZmHOX2a(2)                   <---------SPL1(2)     <---------LBD16                    --------->ARR11(3)                   <---------SPL7   -------->P                           --------->ARR14(2)                  <---------ANAC58  ------->GAMYB                         <---------ARR14(2)                  <---------ANAC58 <---------MYB111(2)                    <---------ARR11(3)               ------------------>SPL14 <---------ALFIN1                      <------ZmHOX2a(1)   --------->WRKY18(1)<---------MYB52(1)  <-- <---------MYB55(2)                ---------->DOF2        <-----------HVH21--------------->AtSPL3---- <---------MYB52(2)             --------->ANAC46   ---------->DOF2  <-----------HVH21            <--- <---------MYB111(1)            --------->ANAC58 --------->AtMYB61 --------->ANAC58     ------>ZmHOX2a(1) --------->MYB46(3)             --------->ANAC58--------->ANAC46   --------->ANAC58--------->WRKY12   gcaacaacccggaaactggtagtagaagtagtagacgcaaaggatcttacaccaaaagacggtcatggaacgtcaagtccgtacgttgtcctcgactatt  5953700                             <---------ANAC55(2)                             <---------ANAC58                             <---------ANAC58                             --------->ANAC55(2)                      --------->TOE2(3)                 --------->ANAC58                 --------->ANAC58                                           ---------->DOF2       <--   ---------->DOF2  ------->TEIL                                         --------->ANAC58     ------- -------RAP2.6(2)<---------MYB52(2)                                      --------->ANAC58     <------ ----->RAP2.6(3) --------->ANAC46 <---------ANAC46                --------->ZAT14          <---------At4g35610 ------At5g28300----------------------->TaNAC69(2)                <---------ZAT14   --------->AtMYB61   acggccaaagaagacggacacgaaccatagtacgtgacttaaaccctgtttggaacgagacactcgagttcagtctcgcaaagcgaccatctcatcagct  5953800                                                                                  <---------O2                                                                                  <---------TGA1a                                                                                  ===================                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)      <                                                                           <------ZmHOX2a(1)       --                                                                           =========================HOX2a_HOX2a                                                                          ----------->ARR10        --                                                                          <------MYB46(1)          <-                                                                        <--------P===================                                                                   <---------ANAC58          <------ZmHOX2a(2)                                     --------->ARR11(3)  ============================HOX2a_HOX2a   --                                     <---------ARR11(3)  ===========================HOX2a_HOX2a  <--- --------DOF2             ------->TEIL                   <------ZmHOX2a(1)<------MYB83<---------ANAC58 -->At4g35610  <---------At4g35610 --------->ANAC58  --------->LBD16    ====================MYC_MYB<- ---At4g35610  --------->At4g35610 --------->ANAC58<---------LBD16 <---------ANAC58   <---------ANAC58   ctttaccgatgttcttgagctcgacatgtaccatgacaagaactttggacaaacccggaggaacaattttcttggtaggatccgacttgggtccgatcag  5953900      <---------WRKY38(1)      <---------WRKY12     --------->WRKY18(1)   <------MYB46(1)   <------MYB83 =======MYC_MYB -------GAMYB                      ------>ZmHOX2a(1) ------->MYB55(2)               <---------YAB1 ------->MYB52(2)              <-----------GT1 --------MYB46(3)         --------->AHL20(1) ==============================bZIP_DOF                                                            -- ------->MYB111(2)        --------->AHL20(2)                                                      --- ------MYB52(1)           <---------AHL20(1)                             ----------->ARR10      ----- ----------RAV1(1)  <----------DOF2<----------DOF2      <---------AHL20(2)                     ------   tttgttggtcaaggagaagaggctttgatatattatcctttggagaagaagagtttgtttaatcttgtacaaggtgagattgggcttagggtttactacg  5954000                                     ------>ZmHOX2a(1)       --------->MYB52(1)                                --------->At4g35610       ---------->DOF2                             <---------MYB52(1)         <------ZmHOX2a(1)              <---------HSFB2a(2)                         --------->MYB52(1)        --------->ALFIN1                    ==============                        --------->DEAR3(1)       --------->MYB55(2)                    --------->HSFB2a(2)             ------>ZmHOX2a(1)<--------P         <---------MYB46(3)                    <-----------RAV1(2)    ---------->DOF2    --------->MYB46(3)       <---------AtMYB61                  <------MYB83 ------->At4g35610     --------->DEAR3(2)    <---------DEAR3(1)                    <------MYB46(1) ------>DEAR3(1)<----------DOF2 <---------At4g35610<---------ANAC46             <------NtERF2      -- ->NtERF2 <---------ATERF1(1)--------->At5g28300--------->ALFIN1             <---------LBD16       -- --->ANAC46 <---------ALFIN1<---------DEAR3(2)  <---------DEAR3(1)  <------ZmHOX2a(1) <-------TEIL --   ccgatgaaaagcctcctcctttgaaaccgacggtagctcctcttgagacggtggtggaggaaaagacggaggagacgaaggcggaaggtccagacgagtc  5954100  Previous    Next  AGI:  At5g17980.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48060.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G03680.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G74720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39865.1); similar to hypothetical protein OsJ_022285 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38802.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62509.1); contains InterPro domain Phosphoribosyltransferase C-terminal, plant (InterPro:IPR013583); contains InterPro domain C2 calcium-depen Range:  from: 5953598    to: 5956747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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