Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1               <---------ICU4       <------ZmHOX2a(1)              <---------YAB1   <-----------HVH21             --------->GLK1(1)            <---------ICU4    --------->ANAC46               <---------GLK1(1)            --------->YAB1    --------->ANAC58              <---------GLK1(2)           <---------ATHB12   --------->ANAC58              --------->ARR14(2)   --------->ANAC58       <-----------GT1           <---------YAB1   --------->ANAC58     --------->AHL20(2)   --------->ARR14(2)                                ------   --------->ANAC46   --------->TOE2(3)      <---------ARR14(2)                 <----------DOF2<-----   ctcacaagtcacaatcatcatcaacattaaacaagtcaggacaagtggatttgtatgattcagatttccattggaaaactagctttaaaattccaacaag  5896800                                                                           <---------AHL20(2)                                                              --------->At4g35610             <-------TEIL                                     --------->ZAT2                      ---          --------->At4g35610  --------->ANAC58               <---------At4g35610              ------          <---------At4g35610  --------->ANAC46             <-----------RAV1(2)               ------- --->ANAC55(2)                 --------->ANAC58     xxxxxxxxxxxxxxxx>smallRNA(i)    <---------At4g35610 ----ANAC55(2)             <-----------GT1   --------->GLK1(2)<---------ZAT2        --------->At4g35610   tgacttaatttcagatgcagaaatttgaataacaagacactgatacgattctaaacaaaaatccagctgaaaatgatataaatcgaagcagagggagaaa  5896900                                                                               --------->WOX13(1)                                                                            --------->ANAC58                                                                            --------->ANAC58     ----                                                                       --------->LBD16        ------>NtERF2                                                  --------->YAB1      --------->LBD16         -------                                                 <<<<<<<<<ARR1       <---------LBD16          -------                                                 <<<<<<<<<ARR2    <---------ARR14(2)       --------->LBD16                                           <---------ZAT14        --------->ARR14(2)       <------NtERF2   ---------->DOF2   <---------WOX13(1)    --------->ZAT18   --------->At4g35610           ------>NtERF2 -------->GT1   --------->TOE2(3)          <---------ZAT18   <---------At4g35610          --------->ANAC58 --->DAG2       --------->TOE1(3)   <------ZmHOX2a(1)  <---------LBD16<---------LBD16     --------->ANAC46 --->DOF2    <-----------GT1     <------ZmHOX2a(1)--------->TOE2(3)  <-----------RAV1(2)  --------->ANAC58   gtggaaaaagagatttaaccttgatagatgaagaaggaggaagagagcacaatcttaagcgggaactgaatccaggggaagcaatccgatgtccgccaac  5897000                              ----------->GT1                              --------->ANAC58                              --------->ANAC58                             --------->DAG2                         --------->LBD16                       <---------LBD16                  <---------REM1(1)                                                  --------->ANAC58                --------->GLK1(1)               --------->GLK1(1)           <---------AHL20(2)               --------->ARR14(2)   <---------ARR11(3)                    <---------YAB1         <-----------GT1--------->RAP2.6(2)     <---------GLK1(1)       --------->YAB1 --->GAMYB <---------LBD16<------NtERF2 ---------->DOF2                 <---------ICU4 ---->RAV1(1)  <---------ARR14(2)   --------->GLK1(2)<---------YAB1    --------->ICU4--------->ANAC58 -->MYB52(1) --------->LBD16---------->DOF2<---------LBD16 --------->At4g35610    <----------ID1   --   agaactcgatttaaccggaaatgtagccggaaaagcaaaatctaaagcggaattcattatcggctacaatggaattatgaaattgagacgaaactactga  5897100                                                      --------------------->WRI1                                                    *TSS                                             <------MYB46(1)                                             ----------->GT1             <---------HSFB2a(1)             <------MYB83             --------->HSFB2a(1)            --------->MYB111(1)             --------->HSFC1(2)             --------->MYB111(2)  ------>ZmHOX2a(2)             <---------HSFC1(2)             --------->MYB59     <---------GLK1(1)                 ---         ----------->GT1                    --------->MYB46(2) --------->ARR14(2)               -----   ---------->DOF2                         <---------MYB55(1)  <---------ARR14(2)               ----- ------->GLK1(2)          ---------->DOF2  <--------P <----------DOF2  <-------TEIL      <-------GAMYB   gaatcgaaagatggaaaattcgaaatcgaaaagagattggagaaggtaggtgataactttggagggatcgccgttcatatgtctcagttttcgttgaggt  5897200                                                                     <---------ANAC58                                                                     <---------bZIP60(2)                               --------->GLK1(1)                     --------->TGA1a                               <---------CCA1(2)                     <---------TGA1a <---------AHL20(1)                            --------->LBD16                          --------->bZIP60(1)                           <---------LBD16                           <---------bZIP60(1)                        --------->ARR14(2)                           <---------O2    --------->AHL20(1)                        <---------ARR14(2)                           <---------ANAC58<---------AHL20(2)                       <---------GLK1(1)                             --------->O2    --------->AHL20(2)                       --------->GLK1(1)                             <---------ANAC55(2)      --------->LBD16  --------->RVE1(1)                             --------->ANAC55(2)    <---------LBD16    --------->CCA1(2)                          ----------->HVH21 --------->AHL20(2)  --------->ARR14(2)  <---------ARR11(3)                      <------ZmHOX2a(1)     <---------ATHB12  <---------ARR14(2)  --------->ARR11(3)                   --------->DAG2       <---------ATHB12 -------------->AGL1----------->ARR10                     ---------->DOF2       --------->ICU4 ---->PCF2       <---------MYB52(1)                       =====================bZIP_DOF ---->PCF5 <---------ZAT14<---------LBD16            --------->TOE2(3) ----------->HVH21        <----   cccataaccggactataccggtaagatatccgggtatctaaaccgagcccataaacatcaaaaaggatgggacgtgacagtaatcaataaatttgaattg  5897300                                                              <---------YAB1                                                            --------->ATHB51                                                            <--------HAHB4                                                            -------->ATHB1                                                            --------->YAB1                                                            <---------AHL20(2)                                             ------->TEIL   <---------ICU4                   --------->ARR11(3)     <---------YAB1    --------->AHL20(2)        ------>ZmHOX2a(2)               <---------ICU4     <---------ATHB51        <-------TEIL                   --------->ICU4      <---------ATHB12            <---------At4g35610       <------ZmHOX2a(2)               <---------YAB1      --------->ICU4           --------->ATERF1(1)      <---------ARR14(2)             --------->YAB1      --------->WOX13(1)==========================      --------->ARR14(2)        <---------DAG2        --------->TOE2(3)    <----------DOF2          -      ------->TEIL <---------GLK1(2)<---------YAB1   --------->YAB1     <---------ARR11(3)        === ------ID1     ---------->DOF2  <----------DOF2     <---------ATHB12    --------->ARR11(3)        ---   gacaaatggatccataaaaaagattatgggccaactttatcataatgaatgcccatcatcaattatttttgggacatctttttggagtcagcctcttgtc  5897400            <------NtERF2            --------->At4g35610            <---------At4g35610           ------>NtERF2           <---------DEAR3(2)          <---------DEAR3(1)         --------->ATERF1(1)                      --------->AHL20(2)        <-----------HVH21                         --------->YAB1        <---------ATERF1(1)       <---------AHL20(1)       <---------TGA1a <---------ZAT14    <---------ZAT2       ====================bZIP_DOF<---------CCA1(1)       --------->TGA1a --------->ZAT18    --------->ZAT2       ====================bZIP_DOF<---------RVE1(1)   --------->ALFIN1    <---------ZAT18    --------->At4g35610 ================bZIP_DOF         --------->ARR11(3)                                           <----- -------->DAG2   --------->DAG2   <---------ARR11(3) ---------->DOF2                           ------ ================bZIP_DOF  <----------DOF2<---------At4g35610                --------->YAB1--------->REM1(1) ------->DOF2   ---------->DOF2 <---------TOE2(3)<---------ATHB12         --------->WOX13(1)   <-----   taaaggtggacgtcggctaaaagtgttcacttttaagatatttcagctccaattaaaaagagtgtttttaaaaaaacaatcagacactagtctacaactt  5897500                                                    <-----------RAV1(1)                                                    <---------MYB46(3)                                   --------->AHL20(1)                                   <---------AHL20(1)   <---------MYB46(3)                             --------->MYB52(1)  --------->ARR14(2)              ------>ZmHOX2a(2)                      --------->YAB1             <---------ARR14(2)             --------->GLK1(1)   <      <---------TOE1(3)   --------->At4g35610   <------ZmHOX2a(1)         <---------ARR14(2)       <-      <---------TOE2(3)   <---------At4g35610 <---------TOE2(3)           <-----------ARR10        -- ----DAG2             --------->ATHB12      ---------->DOF2   <---------TOE2(3)--------->ARR11(3)  <- --------->AGL15 --------->AHL20(2)<---------ARR11(3)   <------MYB83      --------->GLK1(2)      ---- -----DOF2       <---------AHL20(2)--------->ARR11(3)   <------MYB46(1)   --------->ARR14(2)<--------   tatatgttaaggcataagtttaaatgatagctaacaatatatagattaaaggatttgttggtttgatgttagatagtatctgatctccatgagtaaacga  5897600                                                                      <---------ANAC58                                                                      <---------ANAC58                                                            --------->ANAC55(2)                                                            <---------ANAC58                                                            <---------ANAC58                                                           <-------TEIL                                                           ------->TEIL                                                           --------->SPL7                                                          <------------OsbHLH66                                                        --------->ANAC58                                                       --------------->AtSPL3             <---------------AGL15                   <-------TEIL   <---------YAB1  --------->AHL20(2)                             --------------->AtSPL3 ---------RVE1(1)                      <-----------HVH21--------->ANAC58 --------ARR11(3)   ----------->GT1   --------->DEAR3(1)--------->ANAC46 ------->ARR11(3)  --------->DAG2   <---------At5g28300<---------------AtSPL3 --------GLK1(2)   <---------------AtSPL8        --------------->AtSPL8   <---------ZAT6 ------->ARR10   ---------->DOF2 --------->ARR11(3)<---------SPL7<---------YAB1 -DOF5.7(2)  --------------->AGL15 <-----------GT1<---------ANAC46 <---------GLK1(2) ------>ZmHOX2a(2)   agatttttatatcaactagaaaaggtaaaaacaaatatcaccgtcgaaggggacgtacacgtacgtgctgattcttgtgttaatggatcgcttctactca  5897700  Previous    Next  AGI:  At5g17840.1    Description:  chaperone protein dnaJ-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO67492.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305) Range:  from: 5895676    to: 5897152    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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