Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------DEAR3(1)           <---------MYB52(1)                            ----------->HVH21          <-----------TGA1                               --------->WRKY12<---------At4g35610         --------->DEAR3(1)                --------------------->WRI1 <-----------HVH21         --------->DREB2C(2)            --------->ARR11(3) <---------TOE2(3)      <---------ALFIN1           --------->At4g35610     --------->WRKY45--------->At4g35610  ---------->ARF1      --------->TOE2(3)<---------ARR11(3)<---------DOF5.7(2)                       - -------ANAC58    <---------MYB52(2)    <-----------ARR10--------->WRKY38(1)     <-------TEIL     <-- -------ANAC58    --------->MYB46(3) <---------ALFIN1   --------->DOF5.7(2)     --------->CCA1(2)<--- -----DOF2<-----------HVH21      --------->ZAT2    --------->ANAC46  --------->ANAC46       ---------   tcttgtctccaccgtcagtaacaaacctccatactagctgcacatcttcgtacacatcgttgacgatttctccgtcgctgagatacaagttgacatgttt  5862000                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               <---------AGP1                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                      --------->ZAT2  <---------ICU4                             ------>ZmHOX2a(2)        <---------ZAT2 ------>ZmHOX2a(1)                         --------->ARR11(3)         <---------At4g35610 -------->TOE2(3)                     ==============HOX2a_HOX2a       --------->At4g35610 -------YAB1                --------->RAP2.6(3)                    --------->At4g35610 --------GT1 --------->ANAC55(2)      <------ZmHOX2a(1) --------->CCA1(2)     <---------CCA1(2) >ICU4   <----------DOF2  ----------->HVH21<---------ARR11(3)      <---------At4g35610            <--   atccttatggcctttacttattctgagcctgactgcatcaggactgatcttggtggagagataagtctgagcagctcggtagatctcgttgttcataccc  5862100               <-------GAMYB              <---------MYB46(3)                                                          <---------At4g35610     <-----------TGA1                                                                     --------->At4g35610     <-----------HVH21                    --------->ANAC58                                <---------ZAT2    --------->ETT(2)                      --------->ANAC58                                --------->ZAT2    --------->bZIP60(1)              >>>>>>>>>TBF1                                    --------->ALFIN1    <---------bZIP60(1)          <------ZmHOX2a(1)                 ------>ZmHOX2a(1)<---------ANAC46   ---------->ID1           --------->ALFIN1           --------->MYB52(1)    --------->ARR11(3) ---------RAV1(1)       ---------->DOF2 --------->MYB52(1)--------->LBD16    <---------ARR11(3)   atgttgtcgtcatcgatggttagcgtcaaagtggaggaagaagaacggaagaagagagaccggagagtcctgtagatgaaatcttggaggggagctggga  5862200                                                                                     --------->TOE2(3)                                                                                     --------->TOE1(3)                                                --------->ANAC55(2)                 ------>ZmHOX2a(2)                                                <---------ANAC55(2)               <---------ARR14(2)                                      --------->LBD16                             --------->ARR14(2)                                     --------->ANAC58                             --------->ARR11(3)                                     --------->ANAC46                             <---------ARR11(3)                              --------->ANAC55(2)                                 <---------ARR14(3)                              <---------ANAC55(2)    <---------At4g35610          --------->ARR14(3)                         <---------ICU4         <---------ANAC58                 <---------HSFB2a(1)                         --------->YAB1         <---------ANAC58                 --------->HSFB2a(1)                        <---------YAB1------>NtERF2  --------->At4g35610        ----------->ARR10                      --------->YAB1 --------->ANAC58<---------ZAT2    <------MYB46(1)------>ZmHOX2a(1)                     <---------YAB1 ------->GAMYB    --------->ZAT2    <------MYB83<------ZmHOX2a(2)                 ------>ZmHOX2a(2)  --------->MYB46(3) ----------->GT1--------->MYB111(2)               <---------ARR11(3)   <---------LBD16--------->SPL7     --------->MYB46(2)               --------->ARR11(3)<-----------GT1<---------ANAC46      --------->MYB111(1)           -   ttagctcgtgagccattgatcttatcatcatcatgtaacccgccattgatgcgtaagctgtgaaaaccgaagtaggtgaaggaagatccttagagaaaaa  5862300                                                                                      ---------->DOF2                                                                                 --------->CCA1(2)                                                                                <---------ARR11(3)            <XXXXXXXXXXXXXXXXXXXXMIR415                                   ---------->DOF2      <---------ARR11(3)                                                ----------->HVH21      --------->ARR11(3)                                              ----------->GT1<---------AHL20(2) ---------->GT1                                              ---------->DOF2    --------->ARR11(3)   catcgtaatatctctctgtttttgctctgttttctcactgtgttatatgtagatggagagagtgaaagtgagaggtgaaagagatatataaagaagaaga  5862400                --------->HSFB2a(1)                ------------>CBF                ----------->GT1                   --------->ANAC58          <------ZmHOX2a(1)                       --------->ANAC58        <---------TOE2(3)                --------->ATHB12        <---------TOE1(3)                <---------ICU4                  <-----------RAV1(1)    --------->TOE2(3)                   --------->ICU4                <----------DOF2    --------->TOE1(3)         <--------P<---------YAB1          ------------>CBF     ------------>CBF  ------->TEIL  <---------HSFB2a(1)  <---------ARR11(3) <---------ARR11(3) ---------->ID1   ------->TEIL <---------ARR14(2)     *TSS <-------GAMYB <---------YAB1      <-----------GT1  <----------DOF2   gaagaaccttaaggaagaaggtttcatttggggttagaagacattattagtcacacaatgtcttaatacaatcttttgttgtctttattcaatggatgtg  5862500                                                                                                 ----                                                                                                 ----                                                                                                 ----                  <---------YAB1                                                                 <---               <---------YAB1                                                                    ----               <---------AHL20(2)                                   <----------ID1               ----              --------->AHL20(2)                               ---------->DOF2                   ----              --------->YAB1              ----------->GT1----------->GT1     <---------GLK1(2)   ====              <---------AHL20(1)        ---------->DOF2 --------->DAG2   ---------->DOF2         <---         ------------>CBF --------->GLK1(2)            ---------->DOF2   ============================     <-----------GT1      <---------ARR11(3)    --------->YAB1 ======================================   tttgttttttccacaatattattagaaaaatctgagaattggaaaagaaataatagaaaaagtaagaaagaagacaaaagaaactcatggaaaatttcca  5862600       ==========================================MADS_MADS       --------------->AGL15   <----------DOF2 ----->ANAC46 ----->TGA1a                                                                 <---------WRKY18(1) ----->O2                                                                   ----------->HVH21 ------O2--------->ANAC46                                                  <---------WOX13(1) ----->ANAC58                                                             <---------ANAC58 ----->ANAC58                                                             <---------ANAC58 ----->bZIP60(2)                                                     --------->ATHB12 =============bZIP_DOF                                               <---------ICU4 ------TGA1a                                                        <---------YAB1         ---------- ======bZIP_DOF                  --------------->AGL15        <---------AHL20(2)    --------->YAB1 ======bZIP_DOF          <---------ATHB12                    --------->AHL20(2)    <---------ATHB12   cgtctctttccacgaagagcatgtccattcattttccatttttatctaatatgaacagtcttatttaatagttattgcttgaccaatgaagactcgaaaa  5862700                                   <---------ANAC46                                   --------->ALFIN1                                   <---------ANAC58                                 <---------ARR11(3)                                   <---------ANAC58                                 --------->ARR11(3)                                   <-----------RAV1(1)  ---------->ID1   <---------TOE2(3)  --------->YAB1            <-------GAMYB     <-----------RAV1(1)        <---------TOE1(3)-------->P <-------TEIL               <---------At4g35610  <------------------------ANAC81  <---------ZAT6----- ->GT1        <----------DOF2 <---------MYB46(3)---------->ID1          <---------DOF5.7(2)     -----   acattcatgtttccaacttttatattatgcagttgttgtgtggcaattttgttgttttgttctcttcgtcttgataacgttgtagagatactaacccatt  5862800                              <-------TEIL                   <---------ANAC46                   <---------ANAC58          <-----------GT1                   <---------ANAC58        <---------AHL20(2)     --------->TOE2(3)                   <---------bZIP60(2)--------->AHL20(2)         ----------->GT1                  ----------->STF1    <---------AHL20(2)  <---------ANAC46  ----------->HVH21                  <-----------------------TaNAC69(2)      <---------ANAC58 <---------WOX13(1) <-----------GT1----------->TGA1   <---------ARR11(3)     <---------ANAC58<---------ANAC58 ---->ATHB51<------ZmHOX2a(2)--------->CCA1(2)    <---------TOE2(3)       <---------ANAC58 ---->AHL20(2)  ----------->HVH21  --------->ARR11(3)     <---------ANAC55(2)   atttaaccatttggatcagtgacgtttttagatacaagattttattttaactatggtattacttgaaacgtttattgcttgacagaaaaaacaaatggtt  5862900  Previous    Next  AGI:  At5g17760.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46634.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 5860423    to: 5862424    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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